RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 OTUD5Q96G74 571 aa26.6■■□□□ 1.85
PTPN18-205ENST00000428843 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.6■■□□□ 1.85
PTPN18-205ENST00000428843 THSD7BQ9C0I4 1608 aa26.6■■□□□ 1.85
PTPN18-205ENST00000428843 PTPRAP18433 802 aa26.59■■□□□ 1.85
PTPN18-205ENST00000428843 NOGQ13253 232 aa26.59■■□□□ 1.85
PTPN18-205ENST00000428843 SHROOM1Q2M3G4 852 aaPredicted RBP26.59■■□□□ 1.85
PTPN18-205ENST00000428843 CASC1Q6TDU7 716 aa26.59■■□□□ 1.85
PTPN18-205ENST00000428843 ZIC5Q96T25 663 aa26.59■■□□□ 1.85
PTPN18-205ENST00000428843 PHIPQ8WWQ0 1821 aa26.59■■□□□ 1.85
PTPN18-205ENST00000428843 ZBTB48P10074 688 aaPredicted RBP26.58■■□□□ 1.85
PTPN18-205ENST00000428843 PTH1RQ03431 593 aa26.57■■□□□ 1.84
PTPN18-205ENST00000428843 CTDSPL2Q05D32 466 aa26.57■■□□□ 1.84
PTPN18-205ENST00000428843 PPATQ06203 517 aa26.57■■□□□ 1.84
PTPN18-205ENST00000428843 ANAPC4Q9UJX5 808 aa26.57■■□□□ 1.84
PTPN18-205ENST00000428843 ZBTB21Q9ULJ3 1066 aa26.57■■□□□ 1.84
PTPN18-205ENST00000428843 LAMA4Q16363 1823 aa26.57■■□□□ 1.84
PTPN18-205ENST00000428843 GH2P01242 217 aa26.56■■□□□ 1.84
PTPN18-205ENST00000428843 SLC3A2P08195 630 aaKnown RBP26.56■■□□□ 1.84
PTPN18-205ENST00000428843 ASNSP08243 561 aa26.56■■□□□ 1.84
PTPN18-205ENST00000428843 MAP2K2P36507 400 aa26.56■■□□□ 1.84
PTPN18-205ENST00000428843 KIF23Q02241 960 aaPredicted RBP26.56■■□□□ 1.84
PTPN18-205ENST00000428843 PPIL2Q13356 520 aa26.56■■□□□ 1.84
PTPN18-205ENST00000428843 ABCB5Q2M3G0 1257 aa26.56■■□□□ 1.84
PTPN18-205ENST00000428843 CCDC84Q86UT8 332 aaPredicted RBP26.56■■□□□ 1.84
PTPN18-205ENST00000428843 GINM1Q9NU53 330 aa26.56■■□□□ 1.84
PTPN18-205ENST00000428843 MKNK2Q9HBH9 465 aa26.55■■□□□ 1.84
PTPN18-205ENST00000428843 ZHX2Q9Y6X8 837 aa26.55■■□□□ 1.84
PTPN18-205ENST00000428843 IRF6O14896 467 aa26.54■■□□□ 1.84
PTPN18-205ENST00000428843 RASA1P20936 1047 aa26.54■■□□□ 1.84
PTPN18-205ENST00000428843 HAND2P61296 217 aa26.54■■□□□ 1.84
PTPN18-205ENST00000428843 KIAA1211Q6ZU35 1233 aa26.54■■□□□ 1.84
PTPN18-205ENST00000428843 CABP5Q9NP86 173 aa26.54■■□□□ 1.84
PTPN18-205ENST00000428843 CTNNA3Q9UI47 895 aa26.54■■□□□ 1.84
PTPN18-205ENST00000428843 USP17L5A8MUK1 530 aa26.53■■□□□ 1.84
PTPN18-205ENST00000428843 MPHOSPH10O00566 681 aaKnown RBP26.53■■□□□ 1.84
PTPN18-205ENST00000428843 PRDM1O75626 825 aa26.53■■□□□ 1.84
PTPN18-205ENST00000428843 AKR1B1P15121 316 aa26.53■■□□□ 1.84
PTPN18-205ENST00000428843 PDE4BQ07343 736 aa26.53■■□□□ 1.84
PTPN18-205ENST00000428843 CCDC17Q96LX7 622 aa26.53■■□□□ 1.84
PTPN18-205ENST00000428843 ZNF287Q9HBT7 754 aa26.53■■□□□ 1.84
PTPN18-205ENST00000428843 AFG3L2Q9Y4W6 797 aa26.53■■□□□ 1.84
PTPN18-205ENST00000428843 TACC3Q9Y6A5 838 aa26.53■■□□□ 1.84
PTPN18-205ENST00000428843 ZNF213O14771 459 aa26.52■■□□□ 1.84
PTPN18-205ENST00000428843 GUCY1A2P33402 732 aa26.52■■□□□ 1.84
PTPN18-205ENST00000428843 LSG1Q9H089 658 aaKnown RBP26.52■■□□□ 1.84
PTPN18-205ENST00000428843 NBPF3Q9H094 633 aa26.52■■□□□ 1.84
PTPN18-205ENST00000428843 INCENPQ9NQS7 918 aa26.52■■□□□ 1.84
PTPN18-205ENST00000428843 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.52■■□□□ 1.84
PTPN18-205ENST00000428843 MANSC4A6NHS7 340 aaPredicted RBP26.51■■□□□ 1.83
PTPN18-205ENST00000428843 RAB3GAP1Q15042 981 aa26.51■■□□□ 1.83
PTPN18-205ENST00000428843 JMYQ8N9B5 988 aa26.51■■□□□ 1.83
PTPN18-205ENST00000428843 MAP4K1Q92918 833 aa26.51■■□□□ 1.83
PTPN18-205ENST00000428843 MS4A4AQ96JQ5 239 aa26.51■■□□□ 1.83
PTPN18-205ENST00000428843 TBC1D2Q9BYX2 928 aa26.51■■□□□ 1.83
PTPN18-205ENST00000428843 ANO2Q9NQ90 1003 aa26.51■■□□□ 1.83
PTPN18-205ENST00000428843 KCNH4Q9UQ05 1017 aa26.51■■□□□ 1.83
PTPN18-205ENST00000428843 U3KPZ7 1027 aaPredicted RBP26.51■■□□□ 1.83
PTPN18-205ENST00000428843 CEP350Q5VT06 3117 aa26.5■■□□□ 1.83
PTPN18-205ENST00000428843 PTPRFP10586 1907 aa26.5■■□□□ 1.83
PTPN18-205ENST00000428843 GTF2A2P52657 109 aa26.5■■□□□ 1.83
PTPN18-205ENST00000428843 SEPT2Q15019 361 aa26.5■■□□□ 1.83
PTPN18-205ENST00000428843 IMMTQ16891 758 aaKnown RBP26.5■■□□□ 1.83
PTPN18-205ENST00000428843 TMEM179Q6ZVK1 233 aa26.5■■□□□ 1.83
PTPN18-205ENST00000428843 TBC1D10CQ8IV04 446 aa26.5■■□□□ 1.83
PTPN18-205ENST00000428843 ZNF444Q8N0Y2 327 aaPredicted RBP26.5■■□□□ 1.83
PTPN18-205ENST00000428843 AS3MTQ9HBK9 375 aa26.5■■□□□ 1.83
PTPN18-205ENST00000428843 GREB1LQ9C091 1923 aaPredicted RBP26.49■■□□□ 1.83
PTPN18-205ENST00000428843 SNAPC2Q13487 334 aa26.49■■□□□ 1.83
PTPN18-205ENST00000428843 ZNF280CQ8ND82 737 aa26.49■■□□□ 1.83
PTPN18-205ENST00000428843 WDR18Q9BV38 432 aa26.49■■□□□ 1.83
PTPN18-205ENST00000428843 RBM8AQ9Y5S9 174 aaKnown RBP26.49■■□□□ 1.83
PTPN18-205ENST00000428843 TRIM75PA6NK02 468 aa26.48■■□□□ 1.83
PTPN18-205ENST00000428843 CXCL11O14625 94 aa26.48■■□□□ 1.83
PTPN18-205ENST00000428843 FGRP09769 529 aa26.48■■□□□ 1.83
PTPN18-205ENST00000428843 SREBF2Q12772 1141 aa26.48■■□□□ 1.83
PTPN18-205ENST00000428843 SPP2Q13103 211 aa26.48■■□□□ 1.83
PTPN18-205ENST00000428843 AKNAD1Q5T1N1 836 aa26.48■■□□□ 1.83
PTPN18-205ENST00000428843 REM2Q8IYK8 340 aaPredicted RBP26.48■■□□□ 1.83
PTPN18-205ENST00000428843 STAG1Q8WVM7 1258 aa26.48■■□□□ 1.83
PTPN18-205ENST00000428843 ORC4O43929 436 aa26.47■■□□□ 1.83
PTPN18-205ENST00000428843 TM4SF4P48230 202 aa26.47■■□□□ 1.83
PTPN18-205ENST00000428843 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.47■■□□□ 1.83
PTPN18-205ENST00000428843 CCL15-CCL14A0A0B4J2E2 113 aa26.46■■□□□ 1.83
PTPN18-205ENST00000428843 TESPA1A2RU30 521 aaPredicted RBP26.46■■□□□ 1.83
PTPN18-205ENST00000428843 CETPP11597 493 aa26.46■■□□□ 1.83
PTPN18-205ENST00000428843 INHBEP58166 350 aa26.46■■□□□ 1.83
PTPN18-205ENST00000428843 CCL15Q16663 113 aa26.46■■□□□ 1.83
PTPN18-205ENST00000428843 FAM47AQ5JRC9 791 aa26.46■■□□□ 1.83
PTPN18-205ENST00000428843 MFSD6Q6ZSS7 791 aa26.46■■□□□ 1.83
PTPN18-205ENST00000428843 BRI3BPQ8WY22 251 aa26.46■■□□□ 1.83
PTPN18-205ENST00000428843 RNF41Q9H4P4 317 aaPredicted RBP26.46■■□□□ 1.83
PTPN18-205ENST00000428843 TOMM22Q9NS69 142 aa26.46■■□□□ 1.83
PTPN18-205ENST00000428843 A0A0G2JLL6 359 aaPredicted RBP26.45■■□□□ 1.82
PTPN18-205ENST00000428843 PCP11498 1178 aaKnown RBP26.45■■□□□ 1.82
PTPN18-205ENST00000428843 TFAP4Q01664 338 aa26.45■■□□□ 1.82
PTPN18-205ENST00000428843 MAP2K1Q02750 393 aaPredicted RBP26.45■■□□□ 1.82
PTPN18-205ENST00000428843 RRP12Q5JTH9 1297 aaKnown RBP26.45■■□□□ 1.82
PTPN18-205ENST00000428843 PRRT2Q7Z6L0 340 aaPredicted RBP26.45■■□□□ 1.82
PTPN18-205ENST00000428843 CLEC10AQ8IUN9 316 aa26.45■■□□□ 1.82
PTPN18-205ENST00000428843 CYP21A2P08686 494 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms