RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 GH2P01242 217 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 CYP2D6P10635 497 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 SHMT1P34896 483 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 BACE1P56817 501 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 MTMR2Q13614 643 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 CERKLQ49MI3 558 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-208ENST00000428555 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 ANKRD45Q5TZF3 282 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 ZSCAN25Q6NSZ9 544 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-208ENST00000428555 TRIM47Q96LD4 638 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 PUS7LQ9H0K6 701 aaKnown RBP11.43□□□□□ -0.58
TRIM39-208ENST00000428555 EHD4Q9H223 541 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 GINM1Q9NU53 330 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 PTCH2Q9Y6C5 1203 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 CENPFP49454 3210 aa11.42□□□□□ -0.58
TRIM39-208ENST00000428555 GABPAQ06546 454 aa11.42□□□□□ -0.58
TRIM39-208ENST00000428555 KBTBD3Q8NAB2 608 aa11.42□□□□□ -0.58
TRIM39-208ENST00000428555 SMCR8Q8TEV9 937 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-208ENST00000428555 DYNLL2Q96FJ2 89 aa11.42□□□□□ -0.58
TRIM39-208ENST00000428555 ATP8A2Q9NTI2 1148 aa11.42□□□□□ -0.58
TRIM39-208ENST00000428555 SLC4A4Q9Y6R1 1079 aa11.42□□□□□ -0.58
TRIM39-208ENST00000428555 CYP2D7A0A087X1C5 515 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 C19orf81C9J6K1 198 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 USP17L12C9JPN9 530 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 USP17L21D6R901 530 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 SMIM22K7EJ46 135 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 RNF113AO15541 343 aaKnown RBP11.41□□□□□ -0.58
TRIM39-208ENST00000428555 GNRH1P01148 92 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 OSBPP22059 807 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 HOXD10P28358 340 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 PABPC4Q13310 644 aaKnown RBP eCLIP11.41□□□□□ -0.58
TRIM39-208ENST00000428555 HDAC1Q13547 482 aaPredicted RBP11.41□□□□□ -0.58
TRIM39-208ENST00000428555 RAB3GAP1Q15042 981 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 ABCB5Q2M3G0 1257 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 ANKRD13CQ8N6S4 541 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 EXOC6Q8TAG9 804 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 OSBP2Q969R2 916 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 ARMC5Q96C12 935 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 STRBPQ96SI9 672 aaKnown RBP11.41□□□□□ -0.58
TRIM39-208ENST00000428555 P2RX7Q99572 595 aaKnown RBP11.41□□□□□ -0.58
TRIM39-208ENST00000428555 ASCC2Q9H1I8 757 aaPredicted RBP11.41□□□□□ -0.58
TRIM39-208ENST00000428555 CABP5Q9NP86 173 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 EMILIN3Q9NT22 766 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 TMOD4Q9NZQ9 345 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 SRRDQ9UH36 339 aa11.41□□□□□ -0.58
TRIM39-208ENST00000428555 SUPT16HQ9Y5B9 1047 aaKnown RBP11.41□□□□□ -0.58
TRIM39-208ENST00000428555 MYO5AQ9Y4I1 1855 aaKnown RBP11.4□□□□□ -0.58
TRIM39-208ENST00000428555 ERC2O15083 957 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 MYCP01106 439 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-208ENST00000428555 GUCY1A2P33402 732 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 SLC9C1Q4G0N8 1177 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 C12orf60Q5U649 245 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 USP17L2Q6R6M4 530 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 NBPF11Q86T75 865 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 SLC44A5Q8NCS7 719 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 PI4K2BQ8TCG2 481 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 ACER1Q8TDN7 264 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 SH3TC2Q8TF17 1288 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 GCC1Q96CN9 775 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-208ENST00000428555 PNMA3Q9UL41 463 aa11.4□□□□□ -0.58
TRIM39-208ENST00000428555 TTC41PQ6P2S7 1318 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 MPHOSPH10O00566 681 aaKnown RBP11.39□□□□□ -0.59
TRIM39-208ENST00000428555 PEX10O60683 326 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 GLRX3O76003 335 aaKnown RBP11.39□□□□□ -0.59
TRIM39-208ENST00000428555 MX1P20591 662 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 HOXA7P31268 230 aaPredicted RBP11.39□□□□□ -0.59
TRIM39-208ENST00000428555 PRMT2P55345 433 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 FCGRTP55899 365 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 AAMPQ13685 434 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 SEPT2Q15019 361 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 ZYXQ15942 572 aaKnown RBP11.39□□□□□ -0.59
TRIM39-208ENST00000428555 CTR9Q6PD62 1173 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 ZNF333Q96JL9 665 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 GABRQQ9UN88 632 aa11.39□□□□□ -0.59
TRIM39-208ENST00000428555 DOCK2Q92608 1830 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 GSG1L2A8MUP6 293 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 IGHDP01880 384 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 ZFYP08048 801 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-208ENST00000428555 GCLCP48506 637 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-208ENST00000428555 CDK8P49336 464 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-208ENST00000428555 PRKCZQ05513 592 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 B4GALNT3Q6L9W6 998 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 RAET1EQ8TD07 263 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 APPBP2Q92624 585 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 SEC62Q99442 399 aaKnown RBP11.38□□□□□ -0.59
TRIM39-208ENST00000428555 FEZ1Q99689 392 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 RWDD1Q9H446 243 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-208ENST00000428555 TNRC18O15417 2968 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-208ENST00000428555 LAMB1P07942 1786 aa11.38□□□□□ -0.59
TRIM39-208ENST00000428555 MYPNQ86TC9 1320 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 SALL3Q9BXA9 1300 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 A0A1W2PRG0 241 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 M0R2C6 588 aa11.37□□□□□ -0.59
TRIM39-208ENST00000428555 TNPO2O14787 897 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms