RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 WDR18Q9BV38 432 aa20.29■□□□□ 0.84
VARS-216ENST00000428445 AS3MTQ9HBK9 375 aa20.29■□□□□ 0.84
VARS-216ENST00000428445 GPR108Q9NPR9 543 aa20.29■□□□□ 0.84
VARS-216ENST00000428445 STAP2Q9UGK3 403 aa20.29■□□□□ 0.84
VARS-216ENST00000428445 DBNLQ9UJU6 430 aaKnown RBP20.29■□□□□ 0.84
VARS-216ENST00000428445 FOCADQ5VW36 1801 aa20.28■□□□□ 0.84
VARS-216ENST00000428445 RLBP1P12271 317 aa20.28■□□□□ 0.84
VARS-216ENST00000428445 PABPC4Q13310 644 aaKnown RBP eCLIP20.28■□□□□ 0.84
VARS-216ENST00000428445 Q3C1V9 767 aa20.28■□□□□ 0.84
VARS-216ENST00000428445 POTEEQ6S8J3 1075 aa20.28■□□□□ 0.84
VARS-216ENST00000428445 CRACR2BQ8N4Y2 399 aaPredicted RBP20.28■□□□□ 0.84
VARS-216ENST00000428445 TBC1D2Q9BYX2 928 aa20.28■□□□□ 0.84
VARS-216ENST00000428445 DHX36Q9H2U1 1008 aaKnown RBP20.28■□□□□ 0.84
VARS-216ENST00000428445 MAST2Q6P0Q8 1798 aa20.27■□□□□ 0.84
VARS-216ENST00000428445 CYP7A1P22680 504 aa20.27■□□□□ 0.84
VARS-216ENST00000428445 IRX3P78415 501 aaPredicted RBP20.27■□□□□ 0.84
VARS-216ENST00000428445 METTL16Q86W50 562 aaKnown RBP20.27■□□□□ 0.84
VARS-216ENST00000428445 FOXP4Q8IVH2 680 aaPredicted RBP20.27■□□□□ 0.84
VARS-216ENST00000428445 MIGA1Q8NAN2 632 aa20.27■□□□□ 0.84
VARS-216ENST00000428445 TRIB2Q92519 343 aa20.27■□□□□ 0.84
VARS-216ENST00000428445 EAF2Q96CJ1 260 aaPredicted RBP20.27■□□□□ 0.84
VARS-216ENST00000428445 TMOD4Q9NZQ9 345 aa20.27■□□□□ 0.84
VARS-216ENST00000428445 HMGCRP04035 888 aa20.26■□□□□ 0.83
VARS-216ENST00000428445 ASNSP08243 561 aa20.26■□□□□ 0.83
VARS-216ENST00000428445 PLCG2P16885 1265 aa20.26■□□□□ 0.83
VARS-216ENST00000428445 TRIM34Q9BYJ4 488 aa20.26■□□□□ 0.83
VARS-216ENST00000428445 ANTXR1Q9H6X2 564 aa20.26■□□□□ 0.83
VARS-216ENST00000428445 RBPJLQ9UBG7 517 aa20.26■□□□□ 0.83
VARS-216ENST00000428445 MORF4L1Q9UBU8 362 aa20.26■□□□□ 0.83
VARS-216ENST00000428445 USP17L10C9JJH3 530 aa20.25■□□□□ 0.83
VARS-216ENST00000428445 SOX1O00570 391 aaPredicted RBP20.25■□□□□ 0.83
VARS-216ENST00000428445 HOXA7P31268 230 aaPredicted RBP20.25■□□□□ 0.83
VARS-216ENST00000428445 MNX1P50219 401 aaPredicted RBP20.25■□□□□ 0.83
VARS-216ENST00000428445 HERVK_113P62684 666 aa20.25■□□□□ 0.83
VARS-216ENST00000428445 ZYXQ15942 572 aaKnown RBP20.25■□□□□ 0.83
VARS-216ENST00000428445 ITPRIPQ8IWB1 547 aa20.25■□□□□ 0.83
VARS-216ENST00000428445 HMX1Q9NP08 348 aaPredicted RBP20.25■□□□□ 0.83
VARS-216ENST00000428445 EMILIN3Q9NT22 766 aa20.25■□□□□ 0.83
VARS-216ENST00000428445 ZBTB21Q9ULJ3 1066 aa20.25■□□□□ 0.83
VARS-216ENST00000428445 MYH1P12882 1939 aa20.25■□□□□ 0.83
VARS-216ENST00000428445 RPTORQ8N122 1335 aa20.25■□□□□ 0.83
VARS-216ENST00000428445 IDH1O75874 414 aaKnown RBP20.24■□□□□ 0.83
VARS-216ENST00000428445 NECAB2Q7Z6G3 386 aa20.24■□□□□ 0.83
VARS-216ENST00000428445 C7orf61Q8IZ16 206 aa20.24■□□□□ 0.83
VARS-216ENST00000428445 PAGR1Q9BTK6 254 aa20.24■□□□□ 0.83
VARS-216ENST00000428445 PORCNQ9H237 461 aa20.24■□□□□ 0.83
VARS-216ENST00000428445 ZMYND8Q9ULU4 1186 aaPredicted RBP20.24■□□□□ 0.83
VARS-216ENST00000428445 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
VARS-216ENST00000428445 C19orf81C9J6K1 198 aa20.23■□□□□ 0.83
VARS-216ENST00000428445 GH2P01242 217 aa20.23■□□□□ 0.83
VARS-216ENST00000428445 MAGEB6Q8N7X4 407 aa20.23■□□□□ 0.83
VARS-216ENST00000428445 GPRC5AQ8NFJ5 357 aa20.23■□□□□ 0.83
VARS-216ENST00000428445 LRCH3Q96II8 777 aa20.23■□□□□ 0.83
VARS-216ENST00000428445 ZNF512BQ96KM6 892 aaPredicted RBP20.23■□□□□ 0.83
VARS-216ENST00000428445 SYN1P17600 705 aa20.22■□□□□ 0.83
VARS-216ENST00000428445 USP5P45974 858 aa20.22■□□□□ 0.83
VARS-216ENST00000428445 CCL14Q16627 93 aa20.22■□□□□ 0.83
VARS-216ENST00000428445 FTSJ3Q8IY81 847 aaKnown RBP20.22■□□□□ 0.83
VARS-216ENST00000428445 LAMA3Q16787 3333 aa20.22■□□□□ 0.83
VARS-216ENST00000428445 HLA-DOAP06340 250 aa20.21■□□□□ 0.83
VARS-216ENST00000428445 PRKAR2AP13861 404 aaKnown RBP20.21■□□□□ 0.83
VARS-216ENST00000428445 EVX2Q03828 476 aa20.21■□□□□ 0.83
VARS-216ENST00000428445 NUDT12Q9BQG2 462 aa20.21■□□□□ 0.83
VARS-216ENST00000428445 EXOC6BQ9Y2D4 811 aa20.21■□□□□ 0.83
VARS-216ENST00000428445 DDX60LQ5H9U9 1706 aaKnown RBP20.21■□□□□ 0.83
VARS-216ENST00000428445 ERVK-9P63128 1117 aa20.2■□□□□ 0.82
VARS-216ENST00000428445 ERVK-24P63145 666 aa20.2■□□□□ 0.82
VARS-216ENST00000428445 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
VARS-216ENST00000428445 USP17L2Q6R6M4 530 aa20.2■□□□□ 0.82
VARS-216ENST00000428445 ACER1Q8TDN7 264 aa20.2■□□□□ 0.82
VARS-216ENST00000428445 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
VARS-216ENST00000428445 CNMDO75829 334 aa20.19■□□□□ 0.82
VARS-216ENST00000428445 CCND3P30281 292 aaPredicted RBP20.19■□□□□ 0.82
VARS-216ENST00000428445 CACNB2Q08289 660 aaPredicted RBP20.19■□□□□ 0.82
VARS-216ENST00000428445 RAB3GAP1Q15042 981 aa20.19■□□□□ 0.82
VARS-216ENST00000428445 MAP3K21Q5TCX8 1036 aa20.19■□□□□ 0.82
VARS-216ENST00000428445 CEP85Q6P2H3 762 aa20.19■□□□□ 0.82
VARS-216ENST00000428445 GPR142Q7Z601 462 aa20.19■□□□□ 0.82
VARS-216ENST00000428445 USP6NLQ92738 828 aa20.19■□□□□ 0.82
VARS-216ENST00000428445 NBPF3Q9H094 633 aa20.19■□□□□ 0.82
VARS-216ENST00000428445 C11orf49Q9H6J7 331 aa20.19■□□□□ 0.82
VARS-216ENST00000428445 OGDHLQ9ULD0 1010 aa20.19■□□□□ 0.82
VARS-216ENST00000428445 PLCD1P51178 756 aa20.18■□□□□ 0.82
VARS-216ENST00000428445 TATDN1Q6P1N9 297 aa20.18■□□□□ 0.82
VARS-216ENST00000428445 AACSQ86V21 672 aa20.18■□□□□ 0.82
VARS-216ENST00000428445 CCAR1Q8IX12 1150 aaKnown RBP20.18■□□□□ 0.82
VARS-216ENST00000428445 ANKLE1Q8NAG6 615 aa20.18■□□□□ 0.82
VARS-216ENST00000428445 PANK1Q8TE04 598 aa20.18■□□□□ 0.82
VARS-216ENST00000428445 IL1RAPL2Q9NP60 686 aa20.18■□□□□ 0.82
VARS-216ENST00000428445 IGSF3O75054 1194 aa20.17■□□□□ 0.82
VARS-216ENST00000428445 MORN1Q5T089 497 aa20.17■□□□□ 0.82
VARS-216ENST00000428445 PLEKHH3Q7Z736 793 aa20.17■□□□□ 0.82
VARS-216ENST00000428445 FEZ1Q99689 392 aa20.17■□□□□ 0.82
VARS-216ENST00000428445 GINM1Q9NU53 330 aa20.17■□□□□ 0.82
VARS-216ENST00000428445 PFASO15067 1338 aa20.17■□□□□ 0.82
VARS-216ENST00000428445 APBB1O00213 710 aa20.16■□□□□ 0.82
VARS-216ENST00000428445 XRCC5P13010 732 aaKnown RBP20.16■□□□□ 0.82
VARS-216ENST00000428445 ZKSCAN1P17029 563 aaPredicted RBP20.16■□□□□ 0.82
VARS-216ENST00000428445 CAPN2P17655 700 aa20.16■□□□□ 0.82
VARS-216ENST00000428445 MAPK4P31152 587 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms