RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 ZCCHC17Q9NP64 241 aaKnown RBP10.72□□□□□ -0.69
LINC00963-204ENST00000427778 AATFQ9NY61 560 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00963-204ENST00000427778 NDUFB9Q9Y6M9 179 aa10.72□□□□□ -0.69
LINC00963-204ENST00000427778 FLT1P17948 1338 aa10.72□□□□□ -0.69
LINC00963-204ENST00000427778 LOC285556D6RIA3 1793 aa10.72□□□□□ -0.69
LINC00963-204ENST00000427778 TCRBV5S4A2TA0A5A2 114 aa10.71□□□□□ -0.69
LINC00963-204ENST00000427778 IGF2BP3O00425 579 aaKnown RBP eCLIP10.71□□□□□ -0.69
LINC00963-204ENST00000427778 MYH8P13535 1937 aa10.71□□□□□ -0.69
LINC00963-204ENST00000427778 PDE6AP16499 860 aa10.71□□□□□ -0.69
LINC00963-204ENST00000427778 PSEN1P49768 467 aa10.71□□□□□ -0.69
LINC00963-204ENST00000427778 OTUD7BQ6GQQ9 843 aa10.71□□□□□ -0.69
LINC00963-204ENST00000427778 ZSCAN29Q8IWY8 852 aaPredicted RBP10.71□□□□□ -0.69
LINC00963-204ENST00000427778 MAGEB6Q8N7X4 407 aa10.71□□□□□ -0.69
LINC00963-204ENST00000427778 RIOK1Q9BRS2 568 aaKnown RBP10.71□□□□□ -0.69
LINC00963-204ENST00000427778 ECHDC1Q9NTX5 307 aa10.71□□□□□ -0.69
LINC00963-204ENST00000427778 PAG1Q9NWQ8 432 aa10.71□□□□□ -0.69
LINC00963-204ENST00000427778 HERC5Q9UII4 1024 aaKnown RBP10.71□□□□□ -0.69
LINC00963-204ENST00000427778 KCNH4Q9UQ05 1017 aa10.71□□□□□ -0.69
LINC00963-204ENST00000427778 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
LINC00963-204ENST00000427778 TTC41PQ6P2S7 1318 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 GOLIM4O00461 696 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 IRF6O14896 467 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 SMARCA5O60264 1052 aaPredicted RBP10.7□□□□□ -0.7
LINC00963-204ENST00000427778 CTNND1O60716 968 aaKnown RBP10.7□□□□□ -0.7
LINC00963-204ENST00000427778 CETPP11597 493 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 SNAPC2Q13487 334 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 SLC9C2Q5TAH2 1124 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 SCYL3Q8IZE3 742 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 BRI3BPQ8WY22 251 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 ARMC5Q96C12 935 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 GPATCH3Q96I76 525 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 PTPN18Q99952 460 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 PI4KBQ9UBF8 816 aa10.7□□□□□ -0.7
LINC00963-204ENST00000427778 SALL3Q9BXA9 1300 aa10.69□□□□□ -0.7
LINC00963-204ENST00000427778 CCL15-CCL14A0A0B4J2E2 113 aa10.69□□□□□ -0.7
LINC00963-204ENST00000427778 H0YGN5 161 aa10.69□□□□□ -0.7
LINC00963-204ENST00000427778 UBE3CQ15386 1083 aa10.69□□□□□ -0.7
LINC00963-204ENST00000427778 CCL15Q16663 113 aa10.69□□□□□ -0.7
LINC00963-204ENST00000427778 TGFBRAP1Q8WUH2 860 aa10.69□□□□□ -0.7
LINC00963-204ENST00000427778 ERO1AQ96HE7 468 aa10.69□□□□□ -0.7
LINC00963-204ENST00000427778 DNAJC2Q99543 621 aaKnown RBP10.69□□□□□ -0.7
LINC00963-204ENST00000427778 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC00963-204ENST00000427778 BOLA2Q9H3K6 86 aa10.69□□□□□ -0.7
LINC00963-204ENST00000427778 TAOK2Q9UL54 1235 aa10.69□□□□□ -0.7
LINC00963-204ENST00000427778 PTPN22Q9Y2R2 807 aa10.69□□□□□ -0.7
LINC00963-204ENST00000427778 ZNF532Q9HCE3 1301 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 CXCL11O14625 94 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 PTPRAP18433 802 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 ADD2P35612 726 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 DYNLL1P63167 89 aaKnown RBP10.68□□□□□ -0.7
LINC00963-204ENST00000427778 FOXP4Q8IVH2 680 aaPredicted RBP10.68□□□□□ -0.7
LINC00963-204ENST00000427778 MAPKAPK5Q8IW41 473 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 MIGA1Q8NAN2 632 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 EDC3Q96F86 508 aaKnown RBP10.68□□□□□ -0.7
LINC00963-204ENST00000427778 TBC1D2Q9BYX2 928 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 EHD4Q9H223 541 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 DNAJC18Q9H819 358 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 PICK1Q9NRD5 415 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 GINM1Q9NU53 330 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 A0A0C4DFX4 3053 aa10.68□□□□□ -0.7
LINC00963-204ENST00000427778 MAGEB6P1A0A0J9YX57 407 aa10.67□□□□□ -0.7
LINC00963-204ENST00000427778 CAP2P40123 477 aa10.67□□□□□ -0.7
LINC00963-204ENST00000427778 CRHR2Q13324 411 aa10.67□□□□□ -0.7
LINC00963-204ENST00000427778 MOGSQ13724 837 aa10.67□□□□□ -0.7
LINC00963-204ENST00000427778 ZSCAN25Q6NSZ9 544 aa10.67□□□□□ -0.7
LINC00963-204ENST00000427778 SMC5Q8IY18 1101 aa10.67□□□□□ -0.7
LINC00963-204ENST00000427778 KBTBD3Q8NAB2 608 aa10.67□□□□□ -0.7
LINC00963-204ENST00000427778 PI4K2BQ8TCG2 481 aa10.67□□□□□ -0.7
LINC00963-204ENST00000427778 CD99L2Q8TCZ2 262 aa10.67□□□□□ -0.7
LINC00963-204ENST00000427778 CRNKL1Q9BZJ0 848 aaKnown RBP10.67□□□□□ -0.7
LINC00963-204ENST00000427778 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.67□□□□□ -0.7
LINC00963-204ENST00000427778 AFG3L2Q9Y4W6 797 aa10.67□□□□□ -0.7
LINC00963-204ENST00000427778 LAMA3Q16787 3333 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 A0A0G2JLL6 359 aaPredicted RBP10.66□□□□□ -0.7
LINC00963-204ENST00000427778 FAM196BA6NMK8 535 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 BTBD19C9JJ37 291 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 ERC2O15083 957 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 GLRX3O76003 335 aaKnown RBP10.66□□□□□ -0.7
LINC00963-204ENST00000427778 HLA-DOAP06340 250 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 SLURP2P0DP57 97 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 HOXB1P14653 301 aaPredicted RBP10.66□□□□□ -0.7
LINC00963-204ENST00000427778 USP5P45974 858 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 PRRT2Q7Z6L0 340 aaPredicted RBP10.66□□□□□ -0.7
LINC00963-204ENST00000427778 ANKRD23Q86SG2 305 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 FAM43AQ8N2R8 423 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 ZNF333Q96JL9 665 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 EFCC1Q9HA90 598 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 RBM27Q9P2N5 1060 aaKnown RBP10.66□□□□□ -0.7
LINC00963-204ENST00000427778 STAP2Q9UGK3 403 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 PALD1Q9ULE6 856 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 ZHX2Q9Y6X8 837 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 ALPK3Q96L96 1907 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 MGAMO43451 1857 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 UNC80Q8N2C7 3258 aa10.66□□□□□ -0.7
LINC00963-204ENST00000427778 ZFYP08048 801 aaPredicted RBP10.65□□□□□ -0.7
LINC00963-204ENST00000427778 ASNSP08243 561 aa10.65□□□□□ -0.7
LINC00963-204ENST00000427778 MX1P20591 662 aa10.65□□□□□ -0.7
LINC00963-204ENST00000427778 RRP1BQ14684 758 aaKnown RBP10.65□□□□□ -0.7
LINC00963-204ENST00000427778 TAF1CQ15572 869 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms