RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TROAPQ12815 778 aa25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 CERS3Q8IU89 383 aa25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 TEX11Q8IYF3 940 aa25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 TMX4Q9H1E5 349 aaPredicted RBP25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 PCDHA7Q9UN72 937 aa25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 FOCADQ5VW36 1801 aa25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 MYH1P12882 1939 aa25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 SF3A1Q15459 793 aaKnown RBP25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 ANO1Q5XXA6 986 aa25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 C2CD5Q86YS7 1000 aa25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 SLF2Q8IX21 1173 aa25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 CKAP2LQ8IYA6 745 aa25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 DDAH1O94760 285 aa25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 CALM1P0DP23 149 aa25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 CALM2P0DP24 149 aa25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 CALM3P0DP25 149 aa25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 DOK7Q18PE1 504 aa25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 KCNG4Q8TDN1 519 aa25.21■■□□□ 1.63
CNEP1R1-202ENST00000427478 QSER1Q2KHR3 1735 aa25.2■■□□□ 1.63
CNEP1R1-202ENST00000427478 GAKO14976 1311 aa25.2■■□□□ 1.62
CNEP1R1-202ENST00000427478 SLC15A2Q16348 729 aa25.2■■□□□ 1.62
CNEP1R1-202ENST00000427478 CCDC73Q6ZRK6 1079 aa25.2■■□□□ 1.62
CNEP1R1-202ENST00000427478 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.2■■□□□ 1.62
CNEP1R1-202ENST00000427478 RNF26Q9BY78 433 aaPredicted RBP25.2■■□□□ 1.62
CNEP1R1-202ENST00000427478 RTN4Q9NQC3 1192 aaKnown RBP25.2■■□□□ 1.62
CNEP1R1-202ENST00000427478 RBM28Q9NW13 759 aaKnown RBP25.2■■□□□ 1.62
CNEP1R1-202ENST00000427478 KCNJ14Q9UNX9 436 aa25.2■■□□□ 1.62
CNEP1R1-202ENST00000427478 PLEKHA8P1O95397 391 aa25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 MMP1P03956 469 aa25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 CCDC192P0DO97 292 aa25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 U2AF2P26368 475 aaKnown RBP eCLIP25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 PLCD1P51178 756 aa25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 TFAP4Q01664 338 aa25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 FSIP1Q8NA03 581 aa25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 TRIM44Q96DX7 344 aaPredicted RBP25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 FAM163AQ96GL9 167 aaPredicted RBP25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 MKNK2Q9HBH9 465 aa25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 SPTLC2O15270 562 aa25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 PLCG2P16885 1265 aa25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 RHBDL3P58872 404 aa25.19■■□□□ 1.62
CNEP1R1-202ENST00000427478 FLT1P17948 1338 aa25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 F8W031 263 aaPredicted RBP25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 SLC44A5Q8NCS7 719 aa25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 SLX4Q8IY92 1834 aa25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 ADAMTSL1Q8N6G6 1762 aa25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 AKAP17AQ02040 695 aaKnown RBP25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 SAFBQ15424 915 aaKnown RBP eCLIP25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 ADALQ6DHV7 355 aa25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 RBM43Q6ZSC3 357 aaKnown RBP25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 CAMKK2Q96RR4 588 aa25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 DAGLAQ9Y4D2 1042 aa25.18■■□□□ 1.62
CNEP1R1-202ENST00000427478 FUT2Q10981 343 aa25.17■■□□□ 1.62
CNEP1R1-202ENST00000427478 RCSD1Q6JBY9 416 aa25.17■■□□□ 1.62
CNEP1R1-202ENST00000427478 DIS3L2Q8IYB7 885 aaKnown RBP25.17■■□□□ 1.62
CNEP1R1-202ENST00000427478 MRPS27Q92552 414 aaKnown RBP25.17■■□□□ 1.62
CNEP1R1-202ENST00000427478 STK32BQ9NY57 414 aa25.17■■□□□ 1.62
CNEP1R1-202ENST00000427478 BTBD18B2RXH4 712 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 H0YIN7 160 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 SNW1Q13573 536 aaKnown RBP25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 CERS5Q8N5B7 392 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 CTCFLQ8NI51 663 aaPredicted RBP25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 MXD3Q9BW11 206 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 hCG_1642624A0A1W2PR95 340 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 G3V3G9 751 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 FAM160A1Q05DH4 1040 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 TYRO3Q06418 890 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 DCAF8Q5TAQ9 597 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 TMTC3Q6ZXV5 915 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 PDLIM2Q96JY6 352 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 IL17RBQ9NRM6 502 aa25.16■■□□□ 1.62
CNEP1R1-202ENST00000427478 NOSTRINQ8IVI9 506 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 ENGASEQ8NFI3 743 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 A0A1W2PQ27 194 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 A0A1W2PQ64 194 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 A0A1W2PQD8 194 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 PRPF3O43395 683 aaKnown RBP25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 TSPY3P0CV98 308 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 TSPY8P0CW00 308 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 PKN1Q16512 942 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 UVSSAQ2YD98 709 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 STYK1Q6J9G0 422 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 EYA3Q99504 573 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 MRVI1Q9Y6F6 885 aa25.15■■□□□ 1.62
CNEP1R1-202ENST00000427478 KINO60870 393 aaKnown RBP25.14■■□□□ 1.62
CNEP1R1-202ENST00000427478 CHRNA5P30532 468 aa25.14■■□□□ 1.62
CNEP1R1-202ENST00000427478 NT5C2P49902 561 aa25.14■■□□□ 1.62
CNEP1R1-202ENST00000427478 SLC39A14Q15043 492 aa25.14■■□□□ 1.62
CNEP1R1-202ENST00000427478 ZNF444Q8N0Y2 327 aaPredicted RBP25.14■■□□□ 1.62
CNEP1R1-202ENST00000427478 KAT14Q9H8E8 782 aa25.14■■□□□ 1.62
CNEP1R1-202ENST00000427478 ZNF219Q9P2Y4 722 aaPredicted RBP25.14■■□□□ 1.62
CNEP1R1-202ENST00000427478 TTF2Q9UNY4 1162 aaKnown RBP25.14■■□□□ 1.62
CNEP1R1-202ENST00000427478 SUGT1Q9Y2Z0 365 aa25.14■■□□□ 1.62
CNEP1R1-202ENST00000427478 CNTNAP5Q8WYK1 1306 aa25.14■■□□□ 1.61
CNEP1R1-202ENST00000427478 A0A1B0GVL5 298 aa25.13■■□□□ 1.61
CNEP1R1-202ENST00000427478 USP17L3A6NCW0 530 aa25.13■■□□□ 1.61
CNEP1R1-202ENST00000427478 USP17L4A6NCW7 530 aa25.13■■□□□ 1.61
CNEP1R1-202ENST00000427478 USP17L1Q7RTZ2 530 aa25.13■■□□□ 1.61
CNEP1R1-202ENST00000427478 VPS54Q9P1Q0 977 aa25.13■■□□□ 1.61
CNEP1R1-202ENST00000427478 V9GY48 417 aaPredicted RBP25.13■■□□□ 1.61
CNEP1R1-202ENST00000427478 MARCKSP29966 332 aaPredicted RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms