RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 FLIIQ13045 1269 aa11.59□□□□□ -0.55
LSG1-202ENST00000427461 FKBP5Q13451 457 aaPredicted RBP11.59□□□□□ -0.55
LSG1-202ENST00000427461 RRP1BQ14684 758 aaKnown RBP11.59□□□□□ -0.55
LSG1-202ENST00000427461 MFSD14CQ5VZR4 134 aa11.59□□□□□ -0.55
LSG1-202ENST00000427461 PLEKHH3Q7Z736 793 aa11.59□□□□□ -0.55
LSG1-202ENST00000427461 CCAR1Q8IX12 1150 aaKnown RBP11.59□□□□□ -0.55
LSG1-202ENST00000427461 EDC3Q96F86 508 aaKnown RBP11.59□□□□□ -0.55
LSG1-202ENST00000427461 DDX4Q9NQI0 724 aaKnown RBP11.59□□□□□ -0.55
LSG1-202ENST00000427461 MROH5Q6ZUA9 1318 aa11.59□□□□□ -0.55
LSG1-202ENST00000427461 ZEB1P37275 1124 aaPredicted RBP11.58□□□□□ -0.56
LSG1-202ENST00000427461 ERVK-9P63128 1117 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 ERVK-24P63145 666 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 MAP2K5Q13163 448 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 PICALMQ13492 652 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 SH3D19Q5HYK7 790 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 METTL24Q5JXM2 366 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 CCDC129Q6ZRS4 1044 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 MICALL1Q8N3F8 863 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 VGLL2Q8N8G2 317 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 PAGR1Q9BTK6 254 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 IDI2Q9BXS1 227 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 UTYO14607 1347 aa11.58□□□□□ -0.56
LSG1-202ENST00000427461 RFX7Q2KHR2 1363 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 MYH2Q9UKX2 1941 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 KBTBD13C9JR72 458 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 F6X3S4 739 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 MSCO60682 206 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 GPR37L1O60883 481 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 RAG1P15918 1043 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 FPGSQ05932 587 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 ARRDC4Q8NCT1 418 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 NPLOC4Q8TAT6 608 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 WDR66Q8TBY9 1149 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 TSR2Q969E8 191 aaKnown RBP11.57□□□□□ -0.56
LSG1-202ENST00000427461 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.57□□□□□ -0.56
LSG1-202ENST00000427461 CHMP4AQ9BY43 222 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 ADAMTS8Q9UP79 889 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 TACC3Q9Y6A5 838 aa11.57□□□□□ -0.56
LSG1-202ENST00000427461 PDE8BO95263 885 aa11.56□□□□□ -0.56
LSG1-202ENST00000427461 CLTBP09497 229 aa11.56□□□□□ -0.56
LSG1-202ENST00000427461 MTMR2Q13614 643 aa11.56□□□□□ -0.56
LSG1-202ENST00000427461 BEND3Q5T5X7 828 aa11.56□□□□□ -0.56
LSG1-202ENST00000427461 GBF1Q92538 1859 aa11.56□□□□□ -0.56
LSG1-202ENST00000427461 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.56□□□□□ -0.56
LSG1-202ENST00000427461 WDFY4Q6ZS81 3184 aa11.55□□□□□ -0.56
LSG1-202ENST00000427461 USP17L5A8MUK1 530 aa11.55□□□□□ -0.56
LSG1-202ENST00000427461 SMIM22K7EJ46 135 aa11.55□□□□□ -0.56
LSG1-202ENST00000427461 KIAA0355O15063 1070 aa11.55□□□□□ -0.56
LSG1-202ENST00000427461 LDHBP07195 334 aaKnown RBP11.55□□□□□ -0.56
LSG1-202ENST00000427461 CYBAP13498 195 aa11.55□□□□□ -0.56
LSG1-202ENST00000427461 HOXA7P31268 230 aaPredicted RBP11.55□□□□□ -0.56
LSG1-202ENST00000427461 ATP2B2Q01814 1243 aa11.55□□□□□ -0.56
LSG1-202ENST00000427461 WDR78Q5VTH9 848 aa11.55□□□□□ -0.56
LSG1-202ENST00000427461 KAZALD1Q96I82 304 aa11.55□□□□□ -0.56
LSG1-202ENST00000427461 OSBPL5Q9H0X9 879 aaPredicted RBP11.55□□□□□ -0.56
LSG1-202ENST00000427461 TSPYL2Q9H2G4 693 aaPredicted RBP11.55□□□□□ -0.56
LSG1-202ENST00000427461 CWC22Q9HCG8 908 aaKnown RBP11.55□□□□□ -0.56
LSG1-202ENST00000427461 LRRC37A2A6NM11 1700 aa11.55□□□□□ -0.56
LSG1-202ENST00000427461 GRM8O00222 908 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 APAF1O14727 1248 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 PQBP1O60828 265 aaKnown RBP11.54□□□□□ -0.56
LSG1-202ENST00000427461 FGFR2P21802 821 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 CAP2P40123 477 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 LRRC41Q15345 812 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 SKIV2LQ15477 1246 aaKnown RBP11.54□□□□□ -0.56
LSG1-202ENST00000427461 TWISTNBQ3B726 338 aaPredicted RBP11.54□□□□□ -0.56
LSG1-202ENST00000427461 C1orf53Q5VUE5 145 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 C16orf59Q7L2K0 433 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 KLHDC4Q8TBB5 520 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 CCER1Q8TC90 406 aaPredicted RBP11.54□□□□□ -0.56
LSG1-202ENST00000427461 SUCLG2Q96I99 432 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 NKX2-4Q9H2Z4 354 aa11.54□□□□□ -0.56
LSG1-202ENST00000427461 TBC1D12O60347 775 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 CNMDO75829 334 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 PTPREP23469 700 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 BACE1P56817 501 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 JAG1P78504 1218 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 NHLH1Q02575 133 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 WDR43Q15061 677 aaKnown RBP eCLIP11.53□□□□□ -0.56
LSG1-202ENST00000427461 AAK1Q2M2I8 961 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 PRAMEF19Q5SWL8 479 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 TMEM39AQ9NV64 488 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 TMOD4Q9NZQ9 345 aa11.53□□□□□ -0.56
LSG1-202ENST00000427461 TLL1O43897 1013 aa11.52□□□□□ -0.57
LSG1-202ENST00000427461 IGHA2P01877 340 aa11.52□□□□□ -0.57
LSG1-202ENST00000427461 IFIT1P09914 478 aaKnown RBP11.52□□□□□ -0.57
LSG1-202ENST00000427461 CALD1Q05682 793 aaKnown RBP11.52□□□□□ -0.57
LSG1-202ENST00000427461 SHROOM1Q2M3G4 852 aaPredicted RBP11.52□□□□□ -0.57
LSG1-202ENST00000427461 FAM47AQ5JRC9 791 aa11.52□□□□□ -0.57
LSG1-202ENST00000427461 TMEM240Q5SV17 173 aa11.52□□□□□ -0.57
LSG1-202ENST00000427461 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
LSG1-202ENST00000427461 AS3MTQ9HBK9 375 aa11.52□□□□□ -0.57
LSG1-202ENST00000427461 CD320Q9NPF0 282 aa11.52□□□□□ -0.57
LSG1-202ENST00000427461 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.57
LSG1-202ENST00000427461 YBX2Q9Y2T7 364 aaKnown RBP11.52□□□□□ -0.57
LSG1-202ENST00000427461 GAKO14976 1311 aa11.52□□□□□ -0.57
LSG1-202ENST00000427461 MYBBP1AQ9BQG0 1328 aaKnown RBP11.52□□□□□ -0.57
LSG1-202ENST00000427461 SLC15A5A6NIM6 579 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms