RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 IFNL3Q8IZI9 196 aa30.08■■■□□ 2.41
HERPUD2-205ENST00000427455 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.08■■■□□ 2.41
HERPUD2-205ENST00000427455 CCDC171Q6TFL3 1326 aa30.07■■■□□ 2.4
HERPUD2-205ENST00000427455 CCL15-CCL14A0A0B4J2E2 113 aa30.07■■■□□ 2.4
HERPUD2-205ENST00000427455 GDF11O95390 407 aa30.07■■■□□ 2.4
HERPUD2-205ENST00000427455 CETPP11597 493 aa30.07■■■□□ 2.4
HERPUD2-205ENST00000427455 CCL15Q16663 113 aa30.07■■■□□ 2.4
HERPUD2-205ENST00000427455 TBC1D2Q9BYX2 928 aa30.07■■■□□ 2.4
HERPUD2-205ENST00000427455 ZBTB21Q9ULJ3 1066 aa30.07■■■□□ 2.4
HERPUD2-205ENST00000427455 MYH8P13535 1937 aa30.06■■■□□ 2.4
HERPUD2-205ENST00000427455 ROBO3Q96MS0 1386 aa30.06■■■□□ 2.4
HERPUD2-205ENST00000427455 CERKLQ49MI3 558 aaPredicted RBP30.06■■■□□ 2.4
HERPUD2-205ENST00000427455 IFNL1Q8IU54 200 aa30.06■■■□□ 2.4
HERPUD2-205ENST00000427455 NAPBQ9H115 298 aa30.06■■■□□ 2.4
HERPUD2-205ENST00000427455 RNF186Q9NXI6 227 aa30.06■■■□□ 2.4
HERPUD2-205ENST00000427455 USP17L5A8MUK1 530 aa30.05■■■□□ 2.4
HERPUD2-205ENST00000427455 CXCL11O14625 94 aa30.05■■■□□ 2.4
HERPUD2-205ENST00000427455 CTCFP49711 727 aaPredicted RBP30.05■■■□□ 2.4
HERPUD2-205ENST00000427455 MFAP1P55081 439 aaKnown RBP30.05■■■□□ 2.4
HERPUD2-205ENST00000427455 CWC27Q6UX04 472 aaKnown RBP30.05■■■□□ 2.4
HERPUD2-205ENST00000427455 ZNF589Q86UQ0 364 aaPredicted RBP30.05■■■□□ 2.4
HERPUD2-205ENST00000427455 SLC44A5Q8NCS7 719 aa30.05■■■□□ 2.4
HERPUD2-205ENST00000427455 BRI3BPQ8WY22 251 aa30.05■■■□□ 2.4
HERPUD2-205ENST00000427455 DYNLL2Q96FJ2 89 aa30.05■■■□□ 2.4
HERPUD2-205ENST00000427455 AFG3L2Q9Y4W6 797 aa30.05■■■□□ 2.4
HERPUD2-205ENST00000427455 IGF2BP3O00425 579 aaKnown RBP eCLIP30.04■■■□□ 2.4
HERPUD2-205ENST00000427455 FOXP2O15409 715 aa30.04■■■□□ 2.4
HERPUD2-205ENST00000427455 ALDH1A1P00352 501 aa30.04■■■□□ 2.4
HERPUD2-205ENST00000427455 JAG1P78504 1218 aa30.04■■■□□ 2.4
HERPUD2-205ENST00000427455 C16orf86Q6ZW13 317 aa30.04■■■□□ 2.4
HERPUD2-205ENST00000427455 CCDC84Q86UT8 332 aaPredicted RBP30.04■■■□□ 2.4
HERPUD2-205ENST00000427455 SKAP1Q86WV1 359 aa30.04■■■□□ 2.4
HERPUD2-205ENST00000427455 PTPRFP10586 1907 aa30.03■■■□□ 2.4
HERPUD2-205ENST00000427455 MINDY4BA8MYZ0 360 aa30.03■■■□□ 2.4
HERPUD2-205ENST00000427455 SMIM22K7EJ46 135 aa30.03■■■□□ 2.4
HERPUD2-205ENST00000427455 TRPA1O75762 1119 aa30.03■■■□□ 2.4
HERPUD2-205ENST00000427455 GH2P01242 217 aa30.03■■■□□ 2.4
HERPUD2-205ENST00000427455 SHROOM1Q2M3G4 852 aaPredicted RBP30.03■■■□□ 2.4
HERPUD2-205ENST00000427455 VPS53Q5VIR6 699 aa30.03■■■□□ 2.4
HERPUD2-205ENST00000427455 OTUD7BQ6GQQ9 843 aa30.03■■■□□ 2.4
HERPUD2-205ENST00000427455 AS3MTQ9HBK9 375 aa30.03■■■□□ 2.4
HERPUD2-205ENST00000427455 ABCB5Q2M3G0 1257 aa30.02■■■□□ 2.4
HERPUD2-205ENST00000427455 ZNF280CQ8ND82 737 aa30.02■■■□□ 2.4
HERPUD2-205ENST00000427455 PTPN18Q99952 460 aa30.02■■■□□ 2.4
HERPUD2-205ENST00000427455 TRIM75PA6NK02 468 aa30.01■■■□□ 2.39
HERPUD2-205ENST00000427455 HSPA8P11142 646 aaKnown RBP30.01■■■□□ 2.39
HERPUD2-205ENST00000427455 CDK8P49336 464 aa30.01■■■□□ 2.39
HERPUD2-205ENST00000427455 CABP5Q9NP86 173 aa30.01■■■□□ 2.39
HERPUD2-205ENST00000427455 ZMYM6O95789 1325 aa30■■■□□ 2.39
HERPUD2-205ENST00000427455 A0A0G2JLL6 359 aaPredicted RBP30■■■□□ 2.39
HERPUD2-205ENST00000427455 PRRT2Q7Z6L0 340 aaPredicted RBP30■■■□□ 2.39
HERPUD2-205ENST00000427455 WDR18Q9BV38 432 aa30■■■□□ 2.39
HERPUD2-205ENST00000427455 TSKSQ9UJT2 592 aa30■■■□□ 2.39
HERPUD2-205ENST00000427455 RAD50Q92878 1312 aa29.99■■■□□ 2.39
HERPUD2-205ENST00000427455 HSPD1P10809 573 aaKnown RBP29.99■■■□□ 2.39
HERPUD2-205ENST00000427455 ALX1Q15699 326 aa29.99■■■□□ 2.39
HERPUD2-205ENST00000427455 BMP2KLQ5H9B9 411 aa29.99■■■□□ 2.39
HERPUD2-205ENST00000427455 CFHR5Q9BXR6 569 aa29.99■■■□□ 2.39
HERPUD2-205ENST00000427455 CHMLP26374 656 aa29.98■■■□□ 2.39
HERPUD2-205ENST00000427455 PPARAQ07869 468 aa29.98■■■□□ 2.39
HERPUD2-205ENST00000427455 SPP2Q13103 211 aa29.98■■■□□ 2.39
HERPUD2-205ENST00000427455 CCDC17Q96LX7 622 aa29.98■■■□□ 2.39
HERPUD2-205ENST00000427455 ZCCHC17Q9NP64 241 aaKnown RBP29.98■■■□□ 2.39
HERPUD2-205ENST00000427455 LOC285556D6RIA3 1793 aa29.98■■■□□ 2.39
HERPUD2-205ENST00000427455 BTBD19C9JJ37 291 aa29.97■■■□□ 2.39
HERPUD2-205ENST00000427455 MPHOSPH10O00566 681 aaKnown RBP29.97■■■□□ 2.39
HERPUD2-205ENST00000427455 MOGSQ13724 837 aa29.97■■■□□ 2.39
HERPUD2-205ENST00000427455 RAB3GAP1Q15042 981 aa29.97■■■□□ 2.39
HERPUD2-205ENST00000427455 FASTKD5Q7L8L6 764 aaKnown RBP29.97■■■□□ 2.39
HERPUD2-205ENST00000427455 FAM43AQ8N2R8 423 aa29.97■■■□□ 2.39
HERPUD2-205ENST00000427455 RUFY2Q8WXA3 655 aa29.97■■■□□ 2.39
HERPUD2-205ENST00000427455 ZNF287Q9HBT7 754 aa29.97■■■□□ 2.39
HERPUD2-205ENST00000427455 SLC3A2P08195 630 aaKnown RBP29.96■■■□□ 2.39
HERPUD2-205ENST00000427455 LBX1P52954 281 aa29.96■■■□□ 2.39
HERPUD2-205ENST00000427455 TMEM179Q6ZVK1 233 aa29.96■■■□□ 2.39
HERPUD2-205ENST00000427455 ANKRD23Q86SG2 305 aa29.96■■■□□ 2.39
HERPUD2-205ENST00000427455 TBC1D8O95759 1140 aa29.94■■■□□ 2.38
HERPUD2-205ENST00000427455 FGAP02671 866 aa29.94■■■□□ 2.38
HERPUD2-205ENST00000427455 AKR1B1P15121 316 aa29.94■■■□□ 2.38
HERPUD2-205ENST00000427455 GUCY1A2P33402 732 aa29.94■■■□□ 2.38
HERPUD2-205ENST00000427455 BACE1P56817 501 aa29.94■■■□□ 2.38
HERPUD2-205ENST00000427455 GADL1Q6ZQY3 521 aa29.94■■■□□ 2.38
HERPUD2-205ENST00000427455 STK11IPQ8N1F8 1099 aa29.94■■■□□ 2.38
HERPUD2-205ENST00000427455 MKNK2Q9HBH9 465 aa29.94■■■□□ 2.38
HERPUD2-205ENST00000427455 PDE4BQ07343 736 aa29.93■■■□□ 2.38
HERPUD2-205ENST00000427455 MTMR2Q13614 643 aa29.93■■■□□ 2.38
HERPUD2-205ENST00000427455 SEPT2Q15019 361 aa29.93■■■□□ 2.38
HERPUD2-205ENST00000427455 SH3D19Q5HYK7 790 aa29.93■■■□□ 2.38
HERPUD2-205ENST00000427455 PROCA1Q8NCQ7 364 aaPredicted RBP29.93■■■□□ 2.38
HERPUD2-205ENST00000427455 IL25Q9H293 177 aa29.93■■■□□ 2.38
HERPUD2-205ENST00000427455 PRDM10Q9NQV6 1147 aa29.93■■■□□ 2.38
HERPUD2-205ENST00000427455 ANAPC4Q9UJX5 808 aa29.93■■■□□ 2.38
HERPUD2-205ENST00000427455 USP17L10C9JJH3 530 aa29.92■■■□□ 2.38
HERPUD2-205ENST00000427455 RASA1P20936 1047 aa29.92■■■□□ 2.38
HERPUD2-205ENST00000427455 HMGCS2P54868 508 aa29.92■■■□□ 2.38
HERPUD2-205ENST00000427455 TAF1CQ15572 869 aaPredicted RBP29.92■■■□□ 2.38
HERPUD2-205ENST00000427455 GPAT2Q6NUI2 795 aa29.92■■■□□ 2.38
HERPUD2-205ENST00000427455 DSCC1Q9BVC3 393 aa29.92■■■□□ 2.38
HERPUD2-205ENST00000427455 GREB1LQ9C091 1923 aaPredicted RBP29.92■■■□□ 2.38
HERPUD2-205ENST00000427455 C19orf81C9J6K1 198 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms