RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 ORC6Q9Y5N6 252 aa8.61□□□□□ -1.03
LINC00649-203ENST00000427447 CCDC142Q17RM4 750 aa8.61□□□□□ -1.03
LINC00649-203ENST00000427447 KLHL40Q2TBA0 621 aa8.61□□□□□ -1.03
LINC00649-203ENST00000427447 ELMSAN1Q6PJG2 1045 aa8.61□□□□□ -1.03
LINC00649-203ENST00000427447 SYCP3Q8IZU3 236 aa8.61□□□□□ -1.03
LINC00649-203ENST00000427447 SPC25Q9HBM1 224 aa8.61□□□□□ -1.03
LINC00649-203ENST00000427447 CHMP2BQ9UQN3 213 aa8.61□□□□□ -1.03
LINC00649-203ENST00000427447 MLECQ14165 292 aa8.61□□□□□ -1.03
LINC00649-203ENST00000427447 RSBN1LQ6PCB5 846 aaPredicted RBP8.61□□□□□ -1.03
LINC00649-203ENST00000427447 HIP1O00291 1037 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 RANBP6O60518 1105 aaKnown RBP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 KRT20P35900 424 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 APBA1Q02410 837 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 GPR161Q8N6U8 529 aaKnown RBP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 SERPINB6P35237 376 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 CYLC1P35663 651 aaPredicted RBP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 ME1P48163 572 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 PASD1Q8IV76 773 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 PEX5LQ8IYB4 626 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 TP53INP1Q96A56 240 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 LARP6Q9BRS8 491 aaKnown RBP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 MLPHQ9BV36 600 aaPredicted RBP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 HOMER3Q9NSC5 361 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 MYO10Q9HD67 2058 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 SLFNL1Q499Z3 407 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 CCDC93Q567U6 631 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 KSR2Q6VAB6 950 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 SNX32Q86XE0 403 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 TBC1D22AQ8WUA7 517 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 RILPL2Q969X0 211 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 MCRS1Q96EZ8 462 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 CDC5LQ99459 802 aaKnown RBP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 RSPH9Q9H1X1 276 aaPredicted RBP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 STXBP3O00186 592 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 FOSL2P15408 326 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 TNNC1P63316 161 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 MAD1L1Q9Y6D9 718 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 E7ENQ6 273 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 TERB1Q8NA31 727 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 SMCR8Q8TEV9 937 aaPredicted RBP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 NDUFA13Q9P0J0 144 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 CDC40O60508 579 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 THOC7Q6I9Y2 204 aaKnown RBP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 PDZD8Q8NEN9 1154 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 CCDC144AA2RUR9 1427 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 OAS2P29728 719 aaKnown RBP8.6□□□□□ -1.03
LINC00649-203ENST00000427447 LMBR1Q8WVP7 490 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 YIPF3Q9GZM5 350 aa8.6□□□□□ -1.03
LINC00649-203ENST00000427447 CFAP221Q4G0U5 840 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 CALML6Q8TD86 181 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 NR1H4Q96RI1 486 aaPredicted RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 BMP2KQ9NSY1 1161 aaPredicted RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 P4HA2O15460 535 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 DKC1O60832 514 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 ELF1P32519 619 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 NCBP1Q09161 790 aaKnown RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 BZW1Q7L1Q6 419 aaKnown RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 CCPG1Q9ULG6 757 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 AKAP2Q9Y2D5 859 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 LSM1O15116 133 aaKnown RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 KRT86O43790 486 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 RAB11FIP3O75154 756 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 HSPA8P11142 646 aaKnown RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 AHI1Q8N157 1196 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 MTERF3Q96E29 417 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 MTA3Q9BTC8 594 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 RPGRIP1LQ68CZ1 1315 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 GOLGA8KD6RF30 607 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 SART1O43290 800 aaKnown RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 U2AF2P26368 475 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 PPIDQ08752 370 aaKnown RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 ADCK1Q86TW2 530 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 CDR2LQ86X02 465 aaPredicted RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 MICALL2Q8IY33 904 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 C19orf60Q96EN9 201 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 ATP13A5Q4VNC0 1218 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 NCAPG2Q86XI2 1143 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 TRIM45Q9H8W5 580 aaPredicted RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 TRMT1Q9NXH9 659 aaKnown RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 ZNF229Q9UJW7 825 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 TRPC6Q9Y210 931 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 POLR2DO15514 142 aaKnown RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 MCF2P10911 925 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 PPP2R3AQ06190 1150 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 CTNNA2P26232 953 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 KRT83P78385 493 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 GUCY1A3Q02108 690 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 SDE2Q6IQ49 451 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 ARHGAP22Q7Z5H3 698 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 NOP9Q86U38 636 aaKnown RBP8.59□□□□□ -1.03
LINC00649-203ENST00000427447 HIC2Q96JB3 615 aa8.59□□□□□ -1.03
LINC00649-203ENST00000427447 FAM25AB3EWG3 89 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 FAM25CB3EWG5 89 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 FAM25GB3EWG6 89 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 CUL1Q13616 776 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 TXNDC2Q86VQ3 553 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 PYM1Q9BRP8 204 aaKnown RBP8.58□□□□□ -1.04
LINC00649-203ENST00000427447 RASSF9O75901 435 aa8.58□□□□□ -1.04
LINC00649-203ENST00000427447 KRT13P13646 458 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms