RNA–Protein interactions for RNA: ENST00000427332.6

HDAC7-209, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HDAC7, Length 3,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-209ENST00000427332 NTRK3Q16288 839 aa16.49■□□□□ 0.23
HDAC7-209ENST00000427332 DACT2Q5SW24 774 aa16.49■□□□□ 0.23
HDAC7-209ENST00000427332 APOBEC3HQ6NTF7 200 aaKnown RBP16.49■□□□□ 0.23
HDAC7-209ENST00000427332 CATIPQ7Z7H3 387 aa16.49■□□□□ 0.23
HDAC7-209ENST00000427332 SLF2Q8IX21 1173 aa16.49■□□□□ 0.23
HDAC7-209ENST00000427332 KIF3AQ9Y496 699 aa16.49■□□□□ 0.23
HDAC7-209ENST00000427332 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
HDAC7-209ENST00000427332 GOLGA6L4A6NEF3 574 aa16.48■□□□□ 0.23
HDAC7-209ENST00000427332 SSRP1Q08945 709 aaKnown RBP16.48■□□□□ 0.23
HDAC7-209ENST00000427332 ZSCAN23Q3MJ62 389 aa16.48■□□□□ 0.23
HDAC7-209ENST00000427332 FBXL16Q8N461 479 aa16.48■□□□□ 0.23
HDAC7-209ENST00000427332 V9GY48 417 aaPredicted RBP16.48■□□□□ 0.23
HDAC7-209ENST00000427332 MPHOSPH10O00566 681 aaKnown RBP16.48■□□□□ 0.23
HDAC7-209ENST00000427332 VEGFAP15692 232 aaPredicted RBP16.48■□□□□ 0.23
HDAC7-209ENST00000427332 USP28Q96RU2 1077 aa16.48■□□□□ 0.23
HDAC7-209ENST00000427332 CAMK4Q16566 473 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 RBM26Q5T8P6 1007 aaKnown RBP16.47■□□□□ 0.23
HDAC7-209ENST00000427332 FBXO18Q8NFZ0 1043 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 CCDC88AQ3V6T2 1871 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 WDR19Q8NEZ3 1342 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 NRXN2Q9P2S2 1712 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 SHTN1A0MZ66 631 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 STRIP1Q5VSL9 837 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 KRT40Q6A162 431 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 PANK2Q9BZ23 570 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 GAKO14976 1311 aa16.47■□□□□ 0.23
HDAC7-209ENST00000427332 GOLGA6L3A6NEY3 463 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 PSMD14O00487 310 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 PLCG2P16885 1265 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 RASA1P20936 1047 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 SBK1Q52WX2 424 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 NBPF11Q86T75 865 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 STAG2Q8N3U4 1231 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 RNF214Q8ND24 703 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 KAT14Q9H8E8 782 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 VPS54Q9P1Q0 977 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 SCN9AQ15858 1988 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 RCSD1Q6JBY9 416 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 SLC16A10Q8TF71 515 aa16.46■□□□□ 0.23
HDAC7-209ENST00000427332 PRMT6Q96LA8 375 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-209ENST00000427332 TROAPQ12815 778 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 TRIM22Q8IYM9 498 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 NLGN2Q8NFZ4 835 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 BICD2Q8TD16 824 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 LEO1Q8WVC0 666 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-209ENST00000427332 MTFR1LQ9H019 292 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 ORC4O43929 436 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 CDKL5O76039 1030 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 AKAP17AQ02040 695 aaKnown RBP16.45■□□□□ 0.22
HDAC7-209ENST00000427332 PNMA1Q8ND90 353 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 TRIM29Q14134 588 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
HDAC7-209ENST00000427332 LRRC47Q8N1G4 583 aaKnown RBP16.45■□□□□ 0.22
HDAC7-209ENST00000427332 TMTC2Q8N394 836 aa16.45■□□□□ 0.22
HDAC7-209ENST00000427332 BTBD18B2RXH4 712 aa16.44■□□□□ 0.22
HDAC7-209ENST00000427332 LIG1P18858 919 aa16.44■□□□□ 0.22
HDAC7-209ENST00000427332 NR5A1Q13285 461 aa16.44■□□□□ 0.22
HDAC7-209ENST00000427332 CFAP100Q494V2 611 aa16.44■□□□□ 0.22
HDAC7-209ENST00000427332 CTCFLQ8NI51 663 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-209ENST00000427332 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
HDAC7-209ENST00000427332 CEP95Q96GE4 821 aa16.44■□□□□ 0.22
HDAC7-209ENST00000427332 VEZTQ9HBM0 779 aa16.44■□□□□ 0.22
HDAC7-209ENST00000427332 C10orf71Q711Q0 1435 aa16.44■□□□□ 0.22
HDAC7-209ENST00000427332 DDTLA6NHG4 134 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-209ENST00000427332 CRACR2BQ8N4Y2 399 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-209ENST00000427332 FAM163AQ96GL9 167 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-209ENST00000427332 CLIC4Q9Y696 253 aa16.44■□□□□ 0.22
HDAC7-209ENST00000427332 ADAMTSL1Q8N6G6 1762 aa16.44■□□□□ 0.22
HDAC7-209ENST00000427332 AKR1B1P15121 316 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 MARCKSP29966 332 aaPredicted RBP16.43■□□□□ 0.22
HDAC7-209ENST00000427332 ME1P48163 572 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 RASSF7Q02833 373 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 PTMSP20962 102 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 HOMER1Q86YM7 354 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
HDAC7-209ENST00000427332 OXER1Q8TDS5 423 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 LTBP1Q14766 1721 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 FGRP09769 529 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 IFNAR1P17181 557 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 UBE2HP62256 183 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 USP17L2Q6R6M4 530 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 RTKN2Q8IZC4 609 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 PGBD1Q96JS3 809 aa16.43■□□□□ 0.22
HDAC7-209ENST00000427332 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
HDAC7-209ENST00000427332 CDAN1Q8IWY9 1227 aa16.42■□□□□ 0.22
HDAC7-209ENST00000427332 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.22
HDAC7-209ENST00000427332 TMEM47Q9BQJ4 181 aa16.42■□□□□ 0.22
HDAC7-209ENST00000427332 OSBPL5Q9H0X9 879 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-209ENST00000427332 SERPINB13Q9UIV8 391 aa16.42■□□□□ 0.22
HDAC7-209ENST00000427332 FMNL1O95466 1100 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-209ENST00000427332 KIF23Q02241 960 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-209ENST00000427332 SF3A1Q15459 793 aaKnown RBP16.42■□□□□ 0.22
HDAC7-209ENST00000427332 ZSCAN16Q9H4T2 348 aaPredicted RBP16.42■□□□□ 0.22
HDAC7-209ENST00000427332 FRMPD2Q68DX3 1309 aaPredicted RBP16.41■□□□□ 0.22
HDAC7-209ENST00000427332 CCDC196A0A1B0GTZ2 297 aa16.41■□□□□ 0.22
HDAC7-209ENST00000427332 FAM205CA6NFA0 338 aa16.41■□□□□ 0.22
HDAC7-209ENST00000427332 GDF11O95390 407 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms