RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 USP17L10C9JJH3 530 aa15.74■□□□□ 0.11
NELFE-203ENST00000426722 HMGCRP04035 888 aa15.74■□□□□ 0.11
NELFE-203ENST00000426722 RPTORQ8N122 1335 aa15.73■□□□□ 0.11
NELFE-203ENST00000426722 MTMR2Q13614 643 aa15.73■□□□□ 0.11
NELFE-203ENST00000426722 ADGRA1Q86SQ6 560 aa15.73■□□□□ 0.11
NELFE-203ENST00000426722 ITPRIPQ8IWB1 547 aa15.73■□□□□ 0.11
NELFE-203ENST00000426722 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.73■□□□□ 0.11
NELFE-203ENST00000426722 DNAJC18Q9H819 358 aa15.73■□□□□ 0.11
NELFE-203ENST00000426722 HMX1Q9NP08 348 aaPredicted RBP15.73■□□□□ 0.11
NELFE-203ENST00000426722 DBNLQ9UJU6 430 aaKnown RBP15.73■□□□□ 0.11
NELFE-203ENST00000426722 PALD1Q9ULE6 856 aa15.73■□□□□ 0.11
NELFE-203ENST00000426722 PLXNB2O15031 1838 aa15.73■□□□□ 0.11
NELFE-203ENST00000426722 A0A1W2PPC1 479 aa15.72■□□□□ 0.11
NELFE-203ENST00000426722 EVI5O60447 810 aa15.72■□□□□ 0.11
NELFE-203ENST00000426722 CYP7A1P22680 504 aa15.72■□□□□ 0.11
NELFE-203ENST00000426722 NECAB2Q7Z6G3 386 aa15.72■□□□□ 0.11
NELFE-203ENST00000426722 ERC1Q8IUD2 1116 aa15.72■□□□□ 0.11
NELFE-203ENST00000426722 TRMT44Q8IYL2 757 aaKnown RBP15.72■□□□□ 0.11
NELFE-203ENST00000426722 GPRC5AQ8NFJ5 357 aa15.72■□□□□ 0.11
NELFE-203ENST00000426722 SOCS4Q8WXH5 440 aa15.72■□□□□ 0.11
NELFE-203ENST00000426722 EAF2Q96CJ1 260 aaPredicted RBP15.72■□□□□ 0.11
NELFE-203ENST00000426722 P2RX7Q99572 595 aaKnown RBP15.72■□□□□ 0.11
NELFE-203ENST00000426722 CCDC8Q9H0W5 538 aaPredicted RBP15.72■□□□□ 0.11
NELFE-203ENST00000426722 PIH1D3Q9NQM4 214 aaKnown RBP15.72■□□□□ 0.11
NELFE-203ENST00000426722 RBM27Q9P2N5 1060 aaKnown RBP15.72■□□□□ 0.11
NELFE-203ENST00000426722 ZBTB21Q9ULJ3 1066 aa15.72■□□□□ 0.11
NELFE-203ENST00000426722 XRCC5P13010 732 aaKnown RBP15.71■□□□□ 0.11
NELFE-203ENST00000426722 MAPK4P31152 587 aa15.71■□□□□ 0.11
NELFE-203ENST00000426722 HERVK_113P62684 666 aa15.71■□□□□ 0.11
NELFE-203ENST00000426722 MAP3K12Q12852 859 aa15.71■□□□□ 0.11
NELFE-203ENST00000426722 USP17L2Q6R6M4 530 aa15.71■□□□□ 0.11
NELFE-203ENST00000426722 NUDT12Q9BQG2 462 aa15.71■□□□□ 0.11
NELFE-203ENST00000426722 EHD4Q9H223 541 aa15.71■□□□□ 0.11
NELFE-203ENST00000426722 PRO3102Q9H379 93 aa15.71■□□□□ 0.11
NELFE-203ENST00000426722 C1orf115Q9H7X2 142 aa15.71■□□□□ 0.11
NELFE-203ENST00000426722 IDH1O75874 414 aaKnown RBP15.7■□□□□ 0.1
NELFE-203ENST00000426722 GDF11O95390 407 aa15.7■□□□□ 0.1
NELFE-203ENST00000426722 USP5P45974 858 aa15.7■□□□□ 0.1
NELFE-203ENST00000426722 DYNLL1P63167 89 aaKnown RBP15.7■□□□□ 0.1
NELFE-203ENST00000426722 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.1
NELFE-203ENST00000426722 HSP90AB4PQ58FF6 505 aa15.7■□□□□ 0.1
NELFE-203ENST00000426722 TATDN1Q6P1N9 297 aa15.7■□□□□ 0.1
NELFE-203ENST00000426722 TTC6Q86TZ1 520 aa15.7■□□□□ 0.1
NELFE-203ENST00000426722 PAWRQ96IZ0 340 aaKnown RBP15.7■□□□□ 0.1
NELFE-203ENST00000426722 C12orf42Q96LP6 360 aa15.7■□□□□ 0.1
NELFE-203ENST00000426722 MS4A1P11836 297 aa15.69■□□□□ 0.1
NELFE-203ENST00000426722 USP14P54578 494 aa15.69■□□□□ 0.1
NELFE-203ENST00000426722 JAG1P78504 1218 aa15.69■□□□□ 0.1
NELFE-203ENST00000426722 PDE3AQ14432 1141 aa15.69■□□□□ 0.1
NELFE-203ENST00000426722 CEP85Q6P2H3 762 aa15.69■□□□□ 0.1
NELFE-203ENST00000426722 MAGEB6Q8N7X4 407 aa15.69■□□□□ 0.1
NELFE-203ENST00000426722 TLR7Q9NYK1 1049 aaKnown RBP15.69■□□□□ 0.1
NELFE-203ENST00000426722 RBPJLQ9UBG7 517 aa15.69■□□□□ 0.1
NELFE-203ENST00000426722 SAP30BPQ9UHR5 308 aaKnown RBP15.69■□□□□ 0.1
NELFE-203ENST00000426722 SERPINB13Q9UIV8 391 aa15.69■□□□□ 0.1
NELFE-203ENST00000426722 ALPK3Q96L96 1907 aa15.68■□□□□ 0.1
NELFE-203ENST00000426722 RLBP1P12271 317 aa15.68■□□□□ 0.1
NELFE-203ENST00000426722 CYP2B6P20813 491 aa15.68■□□□□ 0.1
NELFE-203ENST00000426722 ERVK-9P63128 1117 aa15.68■□□□□ 0.1
NELFE-203ENST00000426722 ERVK-24P63145 666 aa15.68■□□□□ 0.1
NELFE-203ENST00000426722 TTF1Q15361 905 aaPredicted RBP15.68■□□□□ 0.1
NELFE-203ENST00000426722 MAP3K21Q5TCX8 1036 aa15.68■□□□□ 0.1
NELFE-203ENST00000426722 CCAR1Q8IX12 1150 aaKnown RBP15.68■□□□□ 0.1
NELFE-203ENST00000426722 TXNRD2Q9NNW7 524 aa15.68■□□□□ 0.1
NELFE-203ENST00000426722 EMILIN3Q9NT22 766 aa15.68■□□□□ 0.1
NELFE-203ENST00000426722 USP17L15C9J2P7 530 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 USP17L13C9JLJ4 530 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 USP17L11C9JVI0 530 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 USP17L18D6R9N7 530 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 USP17L22D6RA61 530 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 USP17L17D6RBQ6 530 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 USP17L19D6RCP7 530 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 USP17L20D6RJB6 530 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 GH2P01242 217 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 RGS2P41220 211 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 USP17L24Q0WX57 530 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 CERKLQ49MI3 558 aaPredicted RBP15.67■□□□□ 0.1
NELFE-203ENST00000426722 MIGA1Q8NAN2 632 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 TRIB2Q92519 343 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 NBPF3Q9H094 633 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 CABP5Q9NP86 173 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 OGDHLQ9ULD0 1010 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 RABGAP1Q9Y3P9 1069 aa15.67■□□□□ 0.1
NELFE-203ENST00000426722 GLRX3O76003 335 aaKnown RBP15.66■□□□□ 0.1
NELFE-203ENST00000426722 CCNA1P78396 465 aa15.66■□□□□ 0.1
NELFE-203ENST00000426722 Q3C1V9 767 aa15.66■□□□□ 0.1
NELFE-203ENST00000426722 PLEKHH3Q7Z736 793 aa15.66■□□□□ 0.1
NELFE-203ENST00000426722 AACSQ86V21 672 aa15.66■□□□□ 0.1
NELFE-203ENST00000426722 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.66■□□□□ 0.1
NELFE-203ENST00000426722 USP6NLQ92738 828 aa15.66■□□□□ 0.1
NELFE-203ENST00000426722 ZKSCAN1P17029 563 aaPredicted RBP15.65■□□□□ 0.1
NELFE-203ENST00000426722 BMP8BP34820 402 aa15.65■□□□□ 0.1
NELFE-203ENST00000426722 TRIM32Q13049 653 aa15.65■□□□□ 0.1
NELFE-203ENST00000426722 ABCB5Q2M3G0 1257 aa15.65■□□□□ 0.1
NELFE-203ENST00000426722 MORN1Q5T089 497 aa15.65■□□□□ 0.1
NELFE-203ENST00000426722 LBX2Q6XYB7 198 aa15.65■□□□□ 0.1
NELFE-203ENST00000426722 CATSPERGQ6ZRH7 1159 aa15.65■□□□□ 0.1
NELFE-203ENST00000426722 GPR142Q7Z601 462 aa15.65■□□□□ 0.1
NELFE-203ENST00000426722 RPAP2Q8IXW5 612 aaPredicted RBP15.65■□□□□ 0.1
NELFE-203ENST00000426722 FEZ1Q99689 392 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms