RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 ATP8A2Q9NTI2 1148 aa17.51■□□□□ 0.39
NCKIPSD-205ENST00000426678 LOC285556D6RIA3 1793 aa17.51■□□□□ 0.39
NCKIPSD-205ENST00000426678 PRKAB2O43741 272 aa17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 ZFYP08048 801 aaPredicted RBP17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 PLCD1P51178 756 aa17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 PROCA1Q8NCQ7 364 aaPredicted RBP17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 PUS7LQ9H0K6 701 aaKnown RBP17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 CPA4Q9UI42 421 aa17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 AGTPBP1Q9UPW5 1226 aa17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 HPS5Q9UPZ3 1129 aa17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 SLC45A1Q9Y2W3 748 aa17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 SLC4A4Q9Y6R1 1079 aa17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 BAZ2AQ9UIF9 1905 aaKnown RBP17.5■□□□□ 0.39
NCKIPSD-205ENST00000426678 RNF113AO15541 343 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-205ENST00000426678 CYP2C8P10632 490 aa17.49■□□□□ 0.39
NCKIPSD-205ENST00000426678 HMGCS2P54868 508 aa17.49■□□□□ 0.39
NCKIPSD-205ENST00000426678 CERKLQ49MI3 558 aaPredicted RBP17.49■□□□□ 0.39
NCKIPSD-205ENST00000426678 TATDN1Q6P1N9 297 aa17.49■□□□□ 0.39
NCKIPSD-205ENST00000426678 SMCR8Q8TEV9 937 aaPredicted RBP17.49■□□□□ 0.39
NCKIPSD-205ENST00000426678 APPBP2Q92624 585 aa17.49■□□□□ 0.39
NCKIPSD-205ENST00000426678 FSD1Q9BTV5 496 aa17.49■□□□□ 0.39
NCKIPSD-205ENST00000426678 WDR18Q9BV38 432 aa17.49■□□□□ 0.39
NCKIPSD-205ENST00000426678 PNMA3Q9UL41 463 aa17.49■□□□□ 0.39
NCKIPSD-205ENST00000426678 ADGRA2Q96PE1 1338 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 SALL3Q9BXA9 1300 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 GH2P01242 217 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 JAG1P78504 1218 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 PABPC4Q13310 644 aaKnown RBP eCLIP17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 MTMR2Q13614 643 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 ABCB5Q2M3G0 1257 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 SHROOM1Q2M3G4 852 aaPredicted RBP17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 C17orf99Q6UX52 265 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 SMC5Q8IY18 1101 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 CABP5Q9NP86 173 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 TMOD4Q9NZQ9 345 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 MYH8P13535 1937 aa17.48■□□□□ 0.39
NCKIPSD-205ENST00000426678 CYP2D6P10635 497 aa17.47■□□□□ 0.39
NCKIPSD-205ENST00000426678 SHMT1P34896 483 aa17.47■□□□□ 0.39
NCKIPSD-205ENST00000426678 BACE1P56817 501 aa17.47■□□□□ 0.39
NCKIPSD-205ENST00000426678 LACTBP83111 547 aaPredicted RBP17.47■□□□□ 0.39
NCKIPSD-205ENST00000426678 SH3D19Q5HYK7 790 aa17.47■□□□□ 0.39
NCKIPSD-205ENST00000426678 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
NCKIPSD-205ENST00000426678 LNPKQ9C0E8 428 aa17.47■□□□□ 0.39
NCKIPSD-205ENST00000426678 TAOK2Q9UL54 1235 aa17.47■□□□□ 0.39
NCKIPSD-205ENST00000426678 C19orf81C9J6K1 198 aa17.46■□□□□ 0.39
NCKIPSD-205ENST00000426678 USP17L10C9JJH3 530 aa17.46■□□□□ 0.39
NCKIPSD-205ENST00000426678 GABPAQ06546 454 aa17.46■□□□□ 0.39
NCKIPSD-205ENST00000426678 RAB3GAP1Q15042 981 aa17.46■□□□□ 0.39
NCKIPSD-205ENST00000426678 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.39
NCKIPSD-205ENST00000426678 FEZ1Q99689 392 aa17.46■□□□□ 0.39
NCKIPSD-205ENST00000426678 STAP2Q9UGK3 403 aa17.46■□□□□ 0.39
NCKIPSD-205ENST00000426678 SWAP70Q9UH65 585 aa17.46■□□□□ 0.39
NCKIPSD-205ENST00000426678 PTPN22Q9Y2R2 807 aa17.46■□□□□ 0.39
NCKIPSD-205ENST00000426678 ZSWIM8A7E2V4 1837 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 USP17L12C9JPN9 530 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 USP17L21D6R901 530 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 MPHOSPH10O00566 681 aaKnown RBP17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 GPAA1O43292 621 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 BCRP11274 1271 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 OSBPP22059 807 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 PDE1AP54750 535 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 IRX6P78412 446 aaPredicted RBP17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 EVX2Q03828 476 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 OSBP2Q969R2 916 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 DYNLL2Q96FJ2 89 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 STRBPQ96SI9 672 aaKnown RBP17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 ARHGAP39Q9C0H5 1083 aa17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 ARPP21Q9UBL0 812 aaPredicted RBP17.45■□□□□ 0.38
NCKIPSD-205ENST00000426678 ECM2O94769 699 aaPredicted RBP17.44■□□□□ 0.38
NCKIPSD-205ENST00000426678 GNRH1P01148 92 aa17.44■□□□□ 0.38
NCKIPSD-205ENST00000426678 IGHDP01880 384 aa17.44■□□□□ 0.38
NCKIPSD-205ENST00000426678 GNAT2P19087 354 aa17.44■□□□□ 0.38
NCKIPSD-205ENST00000426678 CAP1Q01518 475 aa17.44■□□□□ 0.38
NCKIPSD-205ENST00000426678 C12orf60Q5U649 245 aa17.44■□□□□ 0.38
NCKIPSD-205ENST00000426678 SLC44A5Q8NCS7 719 aa17.44■□□□□ 0.38
NCKIPSD-205ENST00000426678 CYP2D7A0A087X1C5 515 aa17.43■□□□□ 0.38
NCKIPSD-205ENST00000426678 M0R2C6 588 aa17.43■□□□□ 0.38
NCKIPSD-205ENST00000426678 PSMC4P43686 418 aa17.43■□□□□ 0.38
NCKIPSD-205ENST00000426678 IRX3P78415 501 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-205ENST00000426678 NUCB1Q02818 461 aa17.43■□□□□ 0.38
NCKIPSD-205ENST00000426678 GIMAP6Q6P9H5 292 aa17.43■□□□□ 0.38
NCKIPSD-205ENST00000426678 USP17L2Q6R6M4 530 aa17.43■□□□□ 0.38
NCKIPSD-205ENST00000426678 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
NCKIPSD-205ENST00000426678 EVI5LQ96CN4 794 aa17.43■□□□□ 0.38
NCKIPSD-205ENST00000426678 FMNL1O95466 1100 aaPredicted RBP17.42■□□□□ 0.38
NCKIPSD-205ENST00000426678 APPP05067 770 aa17.42■□□□□ 0.38
NCKIPSD-205ENST00000426678 USP14P54578 494 aa17.42■□□□□ 0.38
NCKIPSD-205ENST00000426678 FCGRTP55899 365 aa17.42■□□□□ 0.38
NCKIPSD-205ENST00000426678 ZYXQ15942 572 aaKnown RBP17.42■□□□□ 0.38
NCKIPSD-205ENST00000426678 CTR9Q6PD62 1173 aa17.42■□□□□ 0.38
NCKIPSD-205ENST00000426678 ASCC2Q9H1I8 757 aaPredicted RBP17.42■□□□□ 0.38
NCKIPSD-205ENST00000426678 GSG1L2A8MUP6 293 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 HOXD10P28358 340 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 GCLCP48506 637 aaPredicted RBP17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 TDO2P48775 406 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 CDK8P49336 464 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 PRMT2P55345 433 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 SOX10P56693 466 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 SEPT2Q15019 361 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 ZMYM1Q5SVZ6 1142 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms