RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 DDRGK1Q96HY6 314 aa21.07■□□□□ 0.96
SLC6A1-202ENST00000425938 WDR18Q9BV38 432 aa21.07■□□□□ 0.96
SLC6A1-202ENST00000425938 DCP1AQ9NPI6 582 aaPredicted RBP21.07■□□□□ 0.96
SLC6A1-202ENST00000425938 ATP8A2Q9NTI2 1148 aa21.07■□□□□ 0.96
SLC6A1-202ENST00000425938 CPA4Q9UI42 421 aa21.07■□□□□ 0.96
SLC6A1-202ENST00000425938 ZBTB21Q9ULJ3 1066 aa21.07■□□□□ 0.96
SLC6A1-202ENST00000425938 AGTPBP1Q9UPW5 1226 aa21.07■□□□□ 0.96
SLC6A1-202ENST00000425938 TNRC18O15417 2968 aaPredicted RBP21.06■□□□□ 0.96
SLC6A1-202ENST00000425938 MYH8P13535 1937 aa21.06■□□□□ 0.96
SLC6A1-202ENST00000425938 LOC285556D6RIA3 1793 aa21.06■□□□□ 0.96
SLC6A1-202ENST00000425938 GNRH1P01148 92 aa21.06■□□□□ 0.96
SLC6A1-202ENST00000425938 MX1P20591 662 aa21.06■□□□□ 0.96
SLC6A1-202ENST00000425938 LRRFIP1Q32MZ4 808 aaKnown RBP21.06■□□□□ 0.96
SLC6A1-202ENST00000425938 TATDN1Q6P1N9 297 aa21.06■□□□□ 0.96
SLC6A1-202ENST00000425938 PNMA3Q9UL41 463 aa21.06■□□□□ 0.96
SLC6A1-202ENST00000425938 ZFYP08048 801 aaPredicted RBP21.05■□□□□ 0.96
SLC6A1-202ENST00000425938 CYP2C8P10632 490 aa21.05■□□□□ 0.96
SLC6A1-202ENST00000425938 PLCD1P51178 756 aa21.05■□□□□ 0.96
SLC6A1-202ENST00000425938 HMGCS2P54868 508 aa21.05■□□□□ 0.96
SLC6A1-202ENST00000425938 PABPC4Q13310 644 aaKnown RBP eCLIP21.05■□□□□ 0.96
SLC6A1-202ENST00000425938 CERKLQ49MI3 558 aaPredicted RBP21.05■□□□□ 0.96
SLC6A1-202ENST00000425938 AMOTL1Q8IY63 956 aa21.05■□□□□ 0.96
SLC6A1-202ENST00000425938 SMCR8Q8TEV9 937 aaPredicted RBP21.05■□□□□ 0.96
SLC6A1-202ENST00000425938 RWDD1Q9H446 243 aaPredicted RBP21.05■□□□□ 0.96
SLC6A1-202ENST00000425938 SUPT16HQ9Y5B9 1047 aaKnown RBP21.05■□□□□ 0.96
SLC6A1-202ENST00000425938 ADGRA2Q96PE1 1338 aa21.04■□□□□ 0.96
SLC6A1-202ENST00000425938 GH2P01242 217 aa21.04■□□□□ 0.96
SLC6A1-202ENST00000425938 CHGBP05060 677 aa21.04■□□□□ 0.96
SLC6A1-202ENST00000425938 EXOC6Q8TAG9 804 aa21.04■□□□□ 0.96
SLC6A1-202ENST00000425938 OTUD7AQ8TE49 926 aaPredicted RBP21.04■□□□□ 0.96
SLC6A1-202ENST00000425938 ARMC5Q96C12 935 aa21.04■□□□□ 0.96
SLC6A1-202ENST00000425938 TMOD4Q9NZQ9 345 aa21.04■□□□□ 0.96
SLC6A1-202ENST00000425938 SLC4A4Q9Y6R1 1079 aa21.04■□□□□ 0.96
SLC6A1-202ENST00000425938 C19orf81C9J6K1 198 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 PRKAB2O43741 272 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 BACE1P56817 501 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 JAG1P78504 1218 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 MTMR2Q13614 643 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 ABCB5Q2M3G0 1257 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 SH3D19Q5HYK7 790 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 TREML2Q5T2D2 321 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 PI4K2BQ8TCG2 481 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 APPBP2Q92624 585 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 ARHGAP39Q9C0H5 1083 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 PUS7LQ9H0K6 701 aaKnown RBP21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 CABP5Q9NP86 173 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 TAOK2Q9UL54 1235 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 CENPFP49454 3210 aa21.03■□□□□ 0.96
SLC6A1-202ENST00000425938 USP17L10C9JJH3 530 aa21.02■□□□□ 0.96
SLC6A1-202ENST00000425938 RNF113AO15541 343 aaKnown RBP21.02■□□□□ 0.96
SLC6A1-202ENST00000425938 SHMT1P34896 483 aa21.02■□□□□ 0.96
SLC6A1-202ENST00000425938 PRMT2P55345 433 aa21.02■□□□□ 0.96
SLC6A1-202ENST00000425938 SHROOM1Q2M3G4 852 aaPredicted RBP21.02■□□□□ 0.96
SLC6A1-202ENST00000425938 NBPF11Q86T75 865 aa21.02■□□□□ 0.96
SLC6A1-202ENST00000425938 PTCH2Q9Y6C5 1203 aa21.02■□□□□ 0.96
SLC6A1-202ENST00000425938 ZSWIM8A7E2V4 1837 aa21.01■□□□□ 0.95
SLC6A1-202ENST00000425938 MGAMO43451 1857 aa21.01■□□□□ 0.95
SLC6A1-202ENST00000425938 BCRP11274 1271 aa21.01■□□□□ 0.95
SLC6A1-202ENST00000425938 OSBPP22059 807 aa21.01■□□□□ 0.95
SLC6A1-202ENST00000425938 GABPAQ06546 454 aa21.01■□□□□ 0.95
SLC6A1-202ENST00000425938 RAB3GAP1Q15042 981 aa21.01■□□□□ 0.95
SLC6A1-202ENST00000425938 SLC9C1Q4G0N8 1177 aa21.01■□□□□ 0.95
SLC6A1-202ENST00000425938 FSD1Q9BTV5 496 aa21.01■□□□□ 0.95
SLC6A1-202ENST00000425938 SWAP70Q9UH65 585 aa21.01■□□□□ 0.95
SLC6A1-202ENST00000425938 CYP2D6P10635 497 aa21■□□□□ 0.95
SLC6A1-202ENST00000425938 PSMC4P43686 418 aa21■□□□□ 0.95
SLC6A1-202ENST00000425938 STRBPQ96SI9 672 aaKnown RBP21■□□□□ 0.95
SLC6A1-202ENST00000425938 FEZ1Q99689 392 aa21■□□□□ 0.95
SLC6A1-202ENST00000425938 SALL3Q9BXA9 1300 aa21■□□□□ 0.95
SLC6A1-202ENST00000425938 KIAA0100Q14667 2235 aaKnown RBP20.99■□□□□ 0.95
SLC6A1-202ENST00000425938 ECM2O94769 699 aaPredicted RBP20.99■□□□□ 0.95
SLC6A1-202ENST00000425938 FMNL1O95466 1100 aaPredicted RBP20.99■□□□□ 0.95
SLC6A1-202ENST00000425938 HOXD10P28358 340 aa20.99■□□□□ 0.95
SLC6A1-202ENST00000425938 OSBP2Q969R2 916 aa20.99■□□□□ 0.95
SLC6A1-202ENST00000425938 USP17L12C9JPN9 530 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 USP17L21D6R901 530 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 MPHOSPH10O00566 681 aaKnown RBP20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 CTGFP29279 349 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 FCGRTP55899 365 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 IRX3P78415 501 aaPredicted RBP20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 EVX2Q03828 476 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 C12orf60Q5U649 245 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 USP17L2Q6R6M4 530 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 SMC5Q8IY18 1101 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 ZNF333Q96JL9 665 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 TRIM47Q96LD4 638 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 LNPKQ9C0E8 428 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 ARPP21Q9UBL0 812 aaPredicted RBP20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 STAP2Q9UGK3 403 aa20.98■□□□□ 0.95
SLC6A1-202ENST00000425938 GPAA1O43292 621 aa20.97■□□□□ 0.95
SLC6A1-202ENST00000425938 GNAT2P19087 354 aa20.97■□□□□ 0.95
SLC6A1-202ENST00000425938 GCLCP48506 637 aaPredicted RBP20.97■□□□□ 0.95
SLC6A1-202ENST00000425938 PDE1AP54750 535 aa20.97■□□□□ 0.95
SLC6A1-202ENST00000425938 ASCC2Q9H1I8 757 aaPredicted RBP20.97■□□□□ 0.95
SLC6A1-202ENST00000425938 SRRDQ9UH36 339 aa20.97■□□□□ 0.95
SLC6A1-202ENST00000425938 POTEFA5A3E0 1075 aa20.96■□□□□ 0.95
SLC6A1-202ENST00000425938 HOXA7P31268 230 aaPredicted RBP20.96■□□□□ 0.95
SLC6A1-202ENST00000425938 USP14P54578 494 aa20.96■□□□□ 0.95
SLC6A1-202ENST00000425938 B4GALNT3Q6L9W6 998 aa20.96■□□□□ 0.95
SLC6A1-202ENST00000425938 GIMAP6Q6P9H5 292 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms