RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PI4K2BQ8TCG2 481 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 GINM1Q9NU53 330 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 MCM9Q9NXL9 1143 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 ZBTB21Q9ULJ3 1066 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 FOCADQ5VW36 1801 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 SALL3Q9BXA9 1300 aa22.14■■□□□ 1.14
SMARCAL1-205ENST00000425815 SMIM22K7EJ46 135 aa22.14■■□□□ 1.13
SMARCAL1-205ENST00000425815 GH2P01242 217 aa22.14■■□□□ 1.13
SMARCAL1-205ENST00000425815 POLR3DP05423 398 aaPredicted RBP22.14■■□□□ 1.13
SMARCAL1-205ENST00000425815 BACE1P56817 501 aa22.14■■□□□ 1.13
SMARCAL1-205ENST00000425815 AS3MTQ9HBK9 375 aa22.14■■□□□ 1.13
SMARCAL1-205ENST00000425815 TTC41PQ6P2S7 1318 aa22.13■■□□□ 1.13
SMARCAL1-205ENST00000425815 ECM2O94769 699 aaPredicted RBP22.13■■□□□ 1.13
SMARCAL1-205ENST00000425815 ANKRD45Q5TZF3 282 aa22.13■■□□□ 1.13
SMARCAL1-205ENST00000425815 EXOC6Q8TAG9 804 aa22.13■■□□□ 1.13
SMARCAL1-205ENST00000425815 GPATCH3Q96I76 525 aa22.13■■□□□ 1.13
SMARCAL1-205ENST00000425815 GUCY1A2P33402 732 aa22.12■■□□□ 1.13
SMARCAL1-205ENST00000425815 PSMC4P43686 418 aa22.12■■□□□ 1.13
SMARCAL1-205ENST00000425815 MTMR2Q13614 643 aa22.12■■□□□ 1.13
SMARCAL1-205ENST00000425815 CERKLQ49MI3 558 aaPredicted RBP22.12■■□□□ 1.13
SMARCAL1-205ENST00000425815 ZSCAN25Q6NSZ9 544 aa22.12■■□□□ 1.13
SMARCAL1-205ENST00000425815 OSBP2Q969R2 916 aa22.12■■□□□ 1.13
SMARCAL1-205ENST00000425815 TRIM47Q96LD4 638 aa22.12■■□□□ 1.13
SMARCAL1-205ENST00000425815 ATP8A2Q9NTI2 1148 aa22.12■■□□□ 1.13
SMARCAL1-205ENST00000425815 PTCH2Q9Y6C5 1203 aa22.12■■□□□ 1.13
SMARCAL1-205ENST00000425815 AAMPQ13685 434 aa22.11■■□□□ 1.13
SMARCAL1-205ENST00000425815 ARHGEF6Q15052 776 aa22.11■■□□□ 1.13
SMARCAL1-205ENST00000425815 GCC1Q96CN9 775 aa22.11■■□□□ 1.13
SMARCAL1-205ENST00000425815 STRBPQ96SI9 672 aaKnown RBP22.11■■□□□ 1.13
SMARCAL1-205ENST00000425815 SUPT16HQ9Y5B9 1047 aaKnown RBP22.11■■□□□ 1.13
SMARCAL1-205ENST00000425815 USP17L10C9JJH3 530 aa22.1■■□□□ 1.13
SMARCAL1-205ENST00000425815 RNF113AO15541 343 aaKnown RBP22.1■■□□□ 1.13
SMARCAL1-205ENST00000425815 IGHDP01880 384 aa22.1■■□□□ 1.13
SMARCAL1-205ENST00000425815 KIF22Q14807 665 aa22.1■■□□□ 1.13
SMARCAL1-205ENST00000425815 SLC44A5Q8NCS7 719 aa22.1■■□□□ 1.13
SMARCAL1-205ENST00000425815 ARMC5Q96C12 935 aa22.1■■□□□ 1.13
SMARCAL1-205ENST00000425815 DYNLL2Q96FJ2 89 aa22.1■■□□□ 1.13
SMARCAL1-205ENST00000425815 EMILIN3Q9NT22 766 aa22.1■■□□□ 1.13
SMARCAL1-205ENST00000425815 SLC4A4Q9Y6R1 1079 aa22.1■■□□□ 1.13
SMARCAL1-205ENST00000425815 CYP2D7A0A087X1C5 515 aa22.09■■□□□ 1.13
SMARCAL1-205ENST00000425815 C19orf81C9J6K1 198 aa22.09■■□□□ 1.13
SMARCAL1-205ENST00000425815 MX1P20591 662 aa22.09■■□□□ 1.13
SMARCAL1-205ENST00000425815 ABCB5Q2M3G0 1257 aa22.09■■□□□ 1.13
SMARCAL1-205ENST00000425815 ASCC2Q9H1I8 757 aaPredicted RBP22.09■■□□□ 1.13
SMARCAL1-205ENST00000425815 USP17L12C9JPN9 530 aa22.08■■□□□ 1.13
SMARCAL1-205ENST00000425815 USP17L21D6R901 530 aa22.08■■□□□ 1.13
SMARCAL1-205ENST00000425815 ERC2O15083 957 aa22.08■■□□□ 1.13
SMARCAL1-205ENST00000425815 GLRX3O76003 335 aaKnown RBP22.08■■□□□ 1.13
SMARCAL1-205ENST00000425815 GNRH1P01148 92 aa22.08■■□□□ 1.13
SMARCAL1-205ENST00000425815 OSBPP22059 807 aa22.08■■□□□ 1.13
SMARCAL1-205ENST00000425815 HOXA7P31268 230 aaPredicted RBP22.08■■□□□ 1.13
SMARCAL1-205ENST00000425815 C12orf60Q5U649 245 aa22.08■■□□□ 1.13
SMARCAL1-205ENST00000425815 ACER1Q8TDN7 264 aa22.08■■□□□ 1.13
SMARCAL1-205ENST00000425815 DDX60LQ5H9U9 1706 aaKnown RBP22.08■■□□□ 1.12
SMARCAL1-205ENST00000425815 FMNL1O95466 1100 aaPredicted RBP22.07■■□□□ 1.12
SMARCAL1-205ENST00000425815 RAB3GAP1Q15042 981 aa22.07■■□□□ 1.12
SMARCAL1-205ENST00000425815 CTR9Q6PD62 1173 aa22.07■■□□□ 1.12
SMARCAL1-205ENST00000425815 ANKRD13CQ8N6S4 541 aa22.07■■□□□ 1.12
SMARCAL1-205ENST00000425815 SMCR8Q8TEV9 937 aaPredicted RBP22.07■■□□□ 1.12
SMARCAL1-205ENST00000425815 APPBP2Q92624 585 aa22.07■■□□□ 1.12
SMARCAL1-205ENST00000425815 STAP2Q9UGK3 403 aa22.07■■□□□ 1.12
SMARCAL1-205ENST00000425815 SRRDQ9UH36 339 aa22.07■■□□□ 1.12
SMARCAL1-205ENST00000425815 PNMA3Q9UL41 463 aa22.07■■□□□ 1.12
SMARCAL1-205ENST00000425815 PTPRFP10586 1907 aa22.06■■□□□ 1.12
SMARCAL1-205ENST00000425815 MYH1P12882 1939 aa22.06■■□□□ 1.12
SMARCAL1-205ENST00000425815 GSG1L2A8MUP6 293 aa22.06■■□□□ 1.12
SMARCAL1-205ENST00000425815 MLLT1Q03111 559 aaPredicted RBP22.06■■□□□ 1.12
SMARCAL1-205ENST00000425815 SEPT2Q15019 361 aa22.06■■□□□ 1.12
SMARCAL1-205ENST00000425815 POTEEQ6S8J3 1075 aa22.06■■□□□ 1.12
SMARCAL1-205ENST00000425815 SMC5Q8IY18 1101 aa22.06■■□□□ 1.12
SMARCAL1-205ENST00000425815 P2RX7Q99572 595 aaKnown RBP22.06■■□□□ 1.12
SMARCAL1-205ENST00000425815 TMOD4Q9NZQ9 345 aa22.06■■□□□ 1.12
SMARCAL1-205ENST00000425815 ZSWIM8A7E2V4 1837 aa22.06■■□□□ 1.12
SMARCAL1-205ENST00000425815 CENPFP49454 3210 aa22.05■■□□□ 1.12
SMARCAL1-205ENST00000425815 M0R2C6 588 aa22.05■■□□□ 1.12
SMARCAL1-205ENST00000425815 ZFYP08048 801 aaPredicted RBP22.05■■□□□ 1.12
SMARCAL1-205ENST00000425815 PRMT2P55345 433 aa22.05■■□□□ 1.12
SMARCAL1-205ENST00000425815 PABPC4Q13310 644 aaKnown RBP eCLIP22.05■■□□□ 1.12
SMARCAL1-205ENST00000425815 USP17L2Q6R6M4 530 aa22.05■■□□□ 1.12
SMARCAL1-205ENST00000425815 ZNF333Q96JL9 665 aa22.05■■□□□ 1.12
SMARCAL1-205ENST00000425815 CABP5Q9NP86 173 aa22.05■■□□□ 1.12
SMARCAL1-205ENST00000425815 GABRQQ9UN88 632 aa22.05■■□□□ 1.12
SMARCAL1-205ENST00000425815 ATAD5Q96QE3 1844 aa22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 PEX10O60683 326 aa22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 CDK8P49336 464 aa22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 PDE1AP54750 535 aa22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 FCGRTP55899 365 aa22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 SIAH1Q8IUQ4 282 aa22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 C12orf42Q96LP6 360 aa22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 SEC62Q99442 399 aaKnown RBP22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 KIAA1683Q9H0B3 1180 aa22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 RWDD1Q9H446 243 aaPredicted RBP22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 SWAP70Q9UH65 585 aa22.04■■□□□ 1.12
SMARCAL1-205ENST00000425815 A0A1W2PRG0 241 aa22.03■■□□□ 1.12
SMARCAL1-205ENST00000425815 POTEFA5A3E0 1075 aa22.03■■□□□ 1.12
SMARCAL1-205ENST00000425815 GPAA1O43292 621 aa22.03■■□□□ 1.12
SMARCAL1-205ENST00000425815 HOXD10P28358 340 aa22.03■■□□□ 1.12
SMARCAL1-205ENST00000425815 PRKCZQ05513 592 aa22.03■■□□□ 1.12
SMARCAL1-205ENST00000425815 FAM110CQ1W6H9 321 aa22.03■■□□□ 1.12
SMARCAL1-205ENST00000425815 C16orf86Q6ZW13 317 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms