RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CCDC146Q8IYE0 955 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 SLC44A5Q8NCS7 719 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 KHSRPQ92945 711 aaKnown RBP eCLIP7.99□□□□□ -1.135e-6■■■■□ 22.3
SDCBP-203ENST00000424270 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.99□□□□□ -1.13
SDCBP-203ENST00000424270 PLA2G12BQ9BX93 195 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 CDH23Q9H251 3354 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 MTIF3Q9H2K0 278 aaKnown RBP7.99□□□□□ -1.13
SDCBP-203ENST00000424270 AS3MTQ9HBK9 375 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 COG5Q9UP83 839 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 UTYO14607 1347 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 MUC6Q6W4X9 2439 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 DCDC2CA8MYV0 355 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 ALADP13716 330 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 ITGB8P26012 769 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 RGS3P49796 1198 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 HERVK_113P62684 666 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 CCNA1P78396 465 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 PPIGQ13427 754 aaKnown RBP eCLIP7.98□□□□□ -1.13
SDCBP-203ENST00000424270 DIXDC1Q155Q3 683 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 ZFPM1Q8IX07 1006 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 HLA-CQ95604 372 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 MRIQ9BWK5 157 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 PORCNQ9H237 461 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 MBIPQ9NS73 344 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 FAM198AQ9UFP1 575 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 SUGT1Q9Y2Z0 365 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 DAGLAQ9Y4D2 1042 aa7.98□□□□□ -1.13
SDCBP-203ENST00000424270 C19orf67A6NJJ6 358 aa7.97□□□□□ -1.13
SDCBP-203ENST00000424270 KIAA0355O15063 1070 aa7.97□□□□□ -1.13
SDCBP-203ENST00000424270 ERVK-9P63128 1117 aa7.97□□□□□ -1.13
SDCBP-203ENST00000424270 ERVK-24P63145 666 aa7.97□□□□□ -1.13
SDCBP-203ENST00000424270 MTMR2Q13614 643 aa7.97□□□□□ -1.13
SDCBP-203ENST00000424270 MORN1Q5T089 497 aa7.97□□□□□ -1.13
SDCBP-203ENST00000424270 PSRC1Q6PGN9 363 aaPredicted RBP7.97□□□□□ -1.13
SDCBP-203ENST00000424270 LMBR1LQ6UX01 489 aa7.97□□□□□ -1.13
SDCBP-203ENST00000424270 DPP9Q86TI2 863 aa7.97□□□□□ -1.13
SDCBP-203ENST00000424270 KCNH6Q9H252 994 aa7.97□□□□□ -1.13
SDCBP-203ENST00000424270 FLRT1Q9NZU1 646 aa7.97□□□□□ -1.13
SDCBP-203ENST00000424270 FAM196BA6NMK8 535 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 USP17L5A8MUK1 530 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 TLL1O43897 1013 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 LDHBP07195 334 aaKnown RBP7.96□□□□□ -1.14
SDCBP-203ENST00000424270 ACRP10323 421 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 SNX17Q15036 470 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 METTL24Q5JXM2 366 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 TMEM199Q8N511 208 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 WDR66Q8TBY9 1149 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 GTF3C2Q8WUA4 911 aaPredicted RBP7.96□□□□□ -1.14
SDCBP-203ENST00000424270 PCGF6Q9BYE7 350 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 TBC1D2Q9BYX2 928 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 TXNRD2Q9NNW7 524 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 DOCK3Q8IZD9 2030 aa7.96□□□□□ -1.14
SDCBP-203ENST00000424270 SLC15A5A6NIM6 579 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 ENTPD3O75355 529 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 TIMP1P01033 207 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 SLURP2P0DP57 97 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 FKBP5Q13451 457 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-203ENST00000424270 LRRC41Q15345 812 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 ZNF365Q70YC5 407 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 FBXO33Q7Z6M2 555 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 RNF180Q86T96 592 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 GJD3Q8N144 294 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 USP6NLQ92738 828 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 VTI1AQ96AJ9 217 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 TRIM34Q9BYJ4 488 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 CERS4Q9HA82 394 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 XPNPEP3Q9NQH7 507 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 MROH5Q6ZUA9 1318 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 LRRC37A2A6NM11 1700 aa7.95□□□□□ -1.14
SDCBP-203ENST00000424270 DOCK1Q14185 1865 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 DDTLA6NHG4 134 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-203ENST00000424270 ZBBXA8MT70 800 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 SEPT4O43236 478 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 GFRA3O60609 400 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 IFIT1P09914 478 aaKnown RBP7.94□□□□□ -1.14
SDCBP-203ENST00000424270 RARBP10826 455 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 CYBAP13498 195 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 CSF2RAP15509 400 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 RABGGTBP53611 331 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 FOXO4P98177 505 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 Q3C1V9 767 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 TMEM240Q5SV17 173 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 C1orf53Q5VUE5 145 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 MFSD5Q6N075 450 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 TRPV1Q8NER1 839 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 PPP1R12CQ9BZL4 782 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 OSBPL5Q9H0X9 879 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-203ENST00000424270 STARD7Q9NQZ5 370 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 RBPJLQ9UBG7 517 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 YBX2Q9Y2T7 364 aaKnown RBP7.94□□□□□ -1.14
SDCBP-203ENST00000424270 FARP1Q9Y4F1 1045 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-203ENST00000424270 PLXNB2O15031 1838 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 FRMPD3Q5JV73 1810 aa7.94□□□□□ -1.14
SDCBP-203ENST00000424270 A0A1W2PQ45 241 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-203ENST00000424270 A0A1W2PQY0 241 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 RFXAPO00287 272 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 FGBP02675 491 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 PTPREP23469 700 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 GNAI1P63096 354 aa7.93□□□□□ -1.14
SDCBP-203ENST00000424270 CALD1Q05682 793 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms