RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 OSBPL7Q9BZF2 842 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 WNT10AQ9GZT5 417 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 KCNMB1Q16558 191 aa4.18□□□□□ -1.74
PMS1-209ENST00000424059 SFRP5Q5T4F7 317 aa4.18□□□□□ -1.74
PMS1-209ENST00000424059 C12orf40Q86WS4 652 aa4.18□□□□□ -1.74
PMS1-209ENST00000424059 ANP32EQ9BTT0 268 aa4.18□□□□□ -1.74
PMS1-209ENST00000424059 CSADQ9Y600 493 aa4.18□□□□□ -1.74
PMS1-209ENST00000424059 USP17L7P0C7H9 530 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 CYP7A1P22680 504 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 KIR3DL1P43629 444 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 LRFN4Q6PJG9 635 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 UBE3DQ7Z6J8 389 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 HID1Q8IV36 788 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 MFSD4AQ8N468 514 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 GAL3ST3Q96A11 431 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 SHROOM4Q9ULL8 1493 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 FAM155AB1AL88 458 aaPredicted RBP4.17□□□□□ -1.74
PMS1-209ENST00000424059 SLITRK5O94991 958 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 CST3P01034 146 aaPredicted RBP4.17□□□□□ -1.74
PMS1-209ENST00000424059 CELA3AP09093 270 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 MESP2Q0VG99 397 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 SEMA3GQ9NS98 782 aa4.17□□□□□ -1.74
PMS1-209ENST00000424059 LRRC10BA6NIK2 292 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 GLI1P08151 1106 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 EIF4BP23588 611 aaKnown RBP4.16□□□□□ -1.74
PMS1-209ENST00000424059 GDNFP39905 211 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 SLBPQ14493 270 aaKnown RBP eCLIP4.16□□□□□ -1.74
PMS1-209ENST00000424059 DIEXFQ68CQ4 756 aaKnown RBP4.16□□□□□ -1.74
PMS1-209ENST00000424059 MPRIPQ6WCQ1 1025 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 TTF2Q9UNY4 1162 aaKnown RBP4.16□□□□□ -1.74
PMS1-209ENST00000424059 PRAMEF27A3QJZ7 478 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 GNA15P30679 374 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 RASIP1Q5U651 963 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 PIWIL2Q8TC59 973 aaKnown RBP4.16□□□□□ -1.74
PMS1-209ENST00000424059 PLPPR2Q96GM1 343 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 KIRREL1Q96J84 757 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 MIPEPQ99797 713 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 TPX2Q9ULW0 747 aaKnown RBP4.16□□□□□ -1.74
PMS1-209ENST00000424059 CAPN6Q9Y6Q1 641 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 IVNS1ABPQ9Y6Y0 642 aa4.16□□□□□ -1.74
PMS1-209ENST00000424059 PRPF40AO75400 957 aaKnown RBP4.15□□□□□ -1.75
PMS1-209ENST00000424059 FBXO24O75426 580 aa4.15□□□□□ -1.75
PMS1-209ENST00000424059 TSPAN15O95858 294 aa4.15□□□□□ -1.75
PMS1-209ENST00000424059 LDHBP07195 334 aaKnown RBP4.15□□□□□ -1.75
PMS1-209ENST00000424059 HMGB1P09429 215 aaKnown RBP4.15□□□□□ -1.75
PMS1-209ENST00000424059 RLBP1P12271 317 aa4.15□□□□□ -1.75
PMS1-209ENST00000424059 LMNB1P20700 586 aa4.15□□□□□ -1.75
PMS1-209ENST00000424059 TMEM67Q5HYA8 995 aa4.15□□□□□ -1.75
PMS1-209ENST00000424059 WIPI1Q5MNZ9 446 aaPredicted RBP4.15□□□□□ -1.75
PMS1-209ENST00000424059 TTBK2Q6IQ55 1244 aa4.15□□□□□ -1.75
PMS1-209ENST00000424059 TOX2Q96NM4 488 aa4.15□□□□□ -1.75
PMS1-209ENST00000424059 CARS2Q9HA77 564 aaKnown RBP4.15□□□□□ -1.75
PMS1-209ENST00000424059 BCCIPQ9P287 314 aaKnown RBP eCLIP4.15□□□□□ -1.75
PMS1-209ENST00000424059 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.14□□□□□ -1.75
PMS1-209ENST00000424059 P4HBP07237 508 aaKnown RBP4.14□□□□□ -1.75
PMS1-209ENST00000424059 ETF1P62495 437 aaKnown RBP4.14□□□□□ -1.75
PMS1-209ENST00000424059 INPP5AQ14642 412 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 FBLN7Q53RD9 439 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 LETMD1Q6P1Q0 360 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 TMPRSS7Q7RTY8 843 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 HSPA12BQ96MM6 686 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 FBRSQ9HAH7 460 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 ST14Q9Y5Y6 855 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 ZNF503-AS2A6NEH8 195 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 ETV3P41162 512 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 MLANAQ16655 118 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 MRPL41Q8IXM3 137 aaKnown RBP4.14□□□□□ -1.75
PMS1-209ENST00000424059 PUS7Q96PZ0 661 aaKnown RBP4.14□□□□□ -1.75
PMS1-209ENST00000424059 SETDB2Q96T68 719 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 PRDM7Q9NQW5 492 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.14□□□□□ -1.75
PMS1-209ENST00000424059 ADAM30Q9UKF2 790 aa4.14□□□□□ -1.75
PMS1-209ENST00000424059 RAC2P15153 192 aa4.13□□□□□ -1.75
PMS1-209ENST00000424059 RAP1GAPP47736 663 aa4.13□□□□□ -1.75
PMS1-209ENST00000424059 PDE4BQ07343 736 aa4.13□□□□□ -1.75
PMS1-209ENST00000424059 ZNF124Q15973 351 aa4.13□□□□□ -1.75
PMS1-209ENST00000424059 SLC6A19Q695T7 634 aa4.13□□□□□ -1.75
PMS1-209ENST00000424059 SPOCD1Q6ZMY3 1216 aa4.13□□□□□ -1.75
PMS1-209ENST00000424059 AGMOQ6ZNB7 445 aa4.13□□□□□ -1.75
PMS1-209ENST00000424059 ZSCAN18Q8TBC5 510 aaPredicted RBP4.13□□□□□ -1.75
PMS1-209ENST00000424059 ATP13A1Q9HD20 1204 aa4.13□□□□□ -1.75
PMS1-209ENST00000424059 WWC3Q9ULE0 1092 aa4.13□□□□□ -1.75
PMS1-209ENST00000424059 H3BS24 57 aa4.12□□□□□ -1.75
PMS1-209ENST00000424059 GFRA2O00451 464 aa4.12□□□□□ -1.75
PMS1-209ENST00000424059 CCDC85BQ15834 202 aaPredicted RBP4.12□□□□□ -1.75
PMS1-209ENST00000424059 PRAMEF13Q5VWM6 474 aa4.12□□□□□ -1.75
PMS1-209ENST00000424059 ALPK1Q96QP1 1244 aa4.12□□□□□ -1.75
PMS1-209ENST00000424059 AK5Q9Y6K8 562 aa4.12□□□□□ -1.75
PMS1-209ENST00000424059 GRK4P32298 578 aa4.12□□□□□ -1.75
PMS1-209ENST00000424059 LIG3P49916 1009 aa4.12□□□□□ -1.75
PMS1-209ENST00000424059 PTPN11Q06124 597 aaPredicted RBP4.12□□□□□ -1.75
PMS1-209ENST00000424059 NKG7Q16617 165 aa4.12□□□□□ -1.75
PMS1-209ENST00000424059 CCDC84Q86UT8 332 aaPredicted RBP4.12□□□□□ -1.75
PMS1-209ENST00000424059 CILP2Q8IUL8 1156 aa4.12□□□□□ -1.75
PMS1-209ENST00000424059 SIAH1Q8IUQ4 282 aa4.12□□□□□ -1.75
PMS1-209ENST00000424059 FBXO15Q8NCQ5 510 aaPredicted RBP4.12□□□□□ -1.75
PMS1-209ENST00000424059 PRR33A8MZF0 331 aa4.11□□□□□ -1.75
PMS1-209ENST00000424059 ST13P50502 369 aaKnown RBP4.11□□□□□ -1.75
PMS1-209ENST00000424059 TSNAXIP1Q2TAA8 658 aa4.11□□□□□ -1.75
PMS1-209ENST00000424059 ZNF326Q5BKZ1 582 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms