RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 KIAA0825Q8IV33 1275 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 PIBF1Q8WXW3 757 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 N4BP2L2Q92802 583 aaPredicted RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 GOLGA1Q92805 767 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 DEFB118Q96PH6 123 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 WRNIP1Q96S55 665 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 POLR3EQ9NVU0 708 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 PI4K2BG5E9Z4 385 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 OPLAHO14841 1288 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 HOXA2O43364 376 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 CCDC15Q0P6D6 951 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 SUZ12Q15022 739 aaKnown RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 TIGD5Q53EQ6 642 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 IQCEQ6IPM2 695 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 PRPF40BQ6NWY9 871 aaKnown RBP4.1□□□□□ -1.75
TOP2A-201ENST00000423485 NLRX1Q86UT6 975 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 FAM43AQ8N2R8 423 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 FLCNQ8NFG4 579 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 PI4K2BQ8TCG2 481 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 LRRC46Q96FV0 321 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 CLDND1Q9NY35 253 aa4.1□□□□□ -1.75
TOP2A-201ENST00000423485 PIK3C2GO75747 1445 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 ADGRF5Q8IZF2 1346 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 RBAK-RBAKDNI3L0D1 243 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 IDH1O75874 414 aaKnown RBP4.09□□□□□ -1.75
TOP2A-201ENST00000423485 FCER1AP12319 257 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 HIBADHP31937 336 aaKnown RBP4.09□□□□□ -1.75
TOP2A-201ENST00000423485 EPS15P42566 896 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 SLC8A3P57103 927 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 TPM4P67936 248 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 FPGSQ05932 587 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 TAF3Q5VWG9 929 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 CDAN1Q8IWY9 1227 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 SMARCC2Q8TAQ2 1214 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 HOXC10Q9NYD6 342 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 ERBB4Q15303 1308 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 CLRN2A0PK11 232 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 TLL1O43897 1013 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 PQBP1O60828 265 aaKnown RBP4.09□□□□□ -1.75
TOP2A-201ENST00000423485 EGFRP00533 1210 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 IGHDP01880 384 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 PRR29P0C7W0 189 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 VEGFBP49765 207 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 RASSF7Q02833 373 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 SCARF1Q14162 830 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 ELF2Q15723 593 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 IP6K1Q92551 441 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 SEPT8Q92599 483 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 VPS33BQ9H267 617 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 BMP2KQ9NSY1 1161 aaPredicted RBP4.09□□□□□ -1.75
TOP2A-201ENST00000423485 SAP30BPQ9UHR5 308 aaKnown RBP4.09□□□□□ -1.75
TOP2A-201ENST00000423485 FAM184BQ9ULE4 1060 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 SLIT2O94813 1529 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 NKTRP30414 1462 aaKnown RBP4.09□□□□□ -1.75
TOP2A-201ENST00000423485 PRAMEF22A3QJZ6 481 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 IRS4O14654 1257 aaPredicted RBP4.09□□□□□ -1.75
TOP2A-201ENST00000423485 RRP9O43818 475 aaKnown RBP4.09□□□□□ -1.75
TOP2A-201ENST00000423485 NRDCO43847 1150 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 NDUFS2O75306 463 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 CRKLP46109 303 aaKnown RBP4.09□□□□□ -1.75
TOP2A-201ENST00000423485 TTF1Q15361 905 aaPredicted RBP4.09□□□□□ -1.75
TOP2A-201ENST00000423485 EXOC8Q8IYI6 725 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 IFNL3Q8IZI9 196 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 DIAPH3Q9NSV4 1193 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 CARMIL3Q8ND23 1372 aa4.09□□□□□ -1.75
TOP2A-201ENST00000423485 PIK3C2AO00443 1686 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.09□□□□□ -1.76
TOP2A-201ENST00000423485 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.09□□□□□ -1.76
TOP2A-201ENST00000423485 POTEB2H3BUK9 544 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 XPAP23025 273 aaPredicted RBP4.09□□□□□ -1.76
TOP2A-201ENST00000423485 ARL4DP49703 201 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 NLRP5P59047 1200 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 GOLGA8FQ08AF8 430 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 GOLGA8DPQ0D2H9 430 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 TAF7Q15545 349 aaPredicted RBP4.09□□□□□ -1.76
TOP2A-201ENST00000423485 TJAP1Q5JTD0 557 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 FAM117BQ6P1L5 589 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 CHURC1Q8WUH1 139 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 SRCIN1Q9C0H9 1055 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 DENND2AQ9ULE3 1009 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 PCDHB11Q9Y5F2 797 aa4.09□□□□□ -1.76
TOP2A-201ENST00000423485 MYBL2P10244 700 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 NFKBIAP25963 317 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 CHST3Q7LGC8 479 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 FNBP4Q8N3X1 1017 aaPredicted RBP4.08□□□□□ -1.76
TOP2A-201ENST00000423485 DBNDD1Q9H9R9 158 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 TNS3Q68CZ2 1445 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 TRIM75PA6NK02 468 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 KINO60870 393 aaKnown RBP4.08□□□□□ -1.76
TOP2A-201ENST00000423485 LTKP29376 864 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 RRS1Q15050 365 aaKnown RBP4.08□□□□□ -1.76
TOP2A-201ENST00000423485 ZYXQ15942 572 aaKnown RBP4.08□□□□□ -1.76
TOP2A-201ENST00000423485 ANGEL2Q5VTE6 544 aaKnown RBP4.08□□□□□ -1.76
TOP2A-201ENST00000423485 ZNF449Q6P9G9 518 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 ATCAYQ86WG3 371 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 IFNL1Q8IU54 200 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 GPRC5AQ8NFJ5 357 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 CCDC12Q8WUD4 166 aaPredicted RBP4.08□□□□□ -1.76
TOP2A-201ENST00000423485 VPS50Q96JG6 964 aa4.08□□□□□ -1.76
TOP2A-201ENST00000423485 MMP19Q99542 508 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms