RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 MCM9Q9NXL9 1143 aa21.79■■□□□ 1.08
UBXN11-208ENST00000421827 TTC41PQ6P2S7 1318 aa21.79■■□□□ 1.08
UBXN11-208ENST00000421827 BCRP11274 1271 aa21.78■■□□□ 1.08
UBXN11-208ENST00000421827 SOX10P56693 466 aa21.78■■□□□ 1.08
UBXN11-208ENST00000421827 HDAC1Q13547 482 aaPredicted RBP21.78■■□□□ 1.08
UBXN11-208ENST00000421827 TREML2Q5T2D2 321 aa21.78■■□□□ 1.08
UBXN11-208ENST00000421827 KBTBD3Q8NAB2 608 aa21.78■■□□□ 1.08
UBXN11-208ENST00000421827 DDX60LQ5H9U9 1706 aaKnown RBP21.77■■□□□ 1.08
UBXN11-208ENST00000421827 PRKAB2O43741 272 aa21.77■■□□□ 1.08
UBXN11-208ENST00000421827 GNRH1P01148 92 aa21.77■■□□□ 1.08
UBXN11-208ENST00000421827 GH2P01242 217 aa21.77■■□□□ 1.08
UBXN11-208ENST00000421827 BACE1P56817 501 aa21.77■■□□□ 1.08
UBXN11-208ENST00000421827 ATP8A2Q9NTI2 1148 aa21.77■■□□□ 1.08
UBXN11-208ENST00000421827 ZBTB47Q9UFB7 747 aaPredicted RBP21.77■■□□□ 1.08
UBXN11-208ENST00000421827 PNMA3Q9UL41 463 aa21.77■■□□□ 1.08
UBXN11-208ENST00000421827 NAV1Q8NEY1 1877 aa21.77■■□□□ 1.08
UBXN11-208ENST00000421827 ERC2O15083 957 aa21.76■■□□□ 1.07
UBXN11-208ENST00000421827 SHMT1P34896 483 aa21.76■■□□□ 1.07
UBXN11-208ENST00000421827 PSMC4P43686 418 aa21.76■■□□□ 1.07
UBXN11-208ENST00000421827 PABPC4Q13310 644 aaKnown RBP eCLIP21.76■■□□□ 1.07
UBXN11-208ENST00000421827 MTMR2Q13614 643 aa21.76■■□□□ 1.07
UBXN11-208ENST00000421827 CERKLQ49MI3 558 aaPredicted RBP21.76■■□□□ 1.07
UBXN11-208ENST00000421827 OTUD7AQ8TE49 926 aaPredicted RBP21.76■■□□□ 1.07
UBXN11-208ENST00000421827 SMCR8Q8TEV9 937 aaPredicted RBP21.76■■□□□ 1.07
UBXN11-208ENST00000421827 GCC1Q96CN9 775 aa21.76■■□□□ 1.07
UBXN11-208ENST00000421827 PUS7LQ9H0K6 701 aaKnown RBP21.76■■□□□ 1.07
UBXN11-208ENST00000421827 MYH7P12883 1935 aa21.76■■□□□ 1.07
UBXN11-208ENST00000421827 C19orf81C9J6K1 198 aa21.75■■□□□ 1.07
UBXN11-208ENST00000421827 USP17L10C9JJH3 530 aa21.75■■□□□ 1.07
UBXN11-208ENST00000421827 ECM2O94769 699 aaPredicted RBP21.75■■□□□ 1.07
UBXN11-208ENST00000421827 GABPAQ06546 454 aa21.75■■□□□ 1.07
UBXN11-208ENST00000421827 ABCB5Q2M3G0 1257 aa21.75■■□□□ 1.07
UBXN11-208ENST00000421827 ANKRD45Q5TZF3 282 aa21.75■■□□□ 1.07
UBXN11-208ENST00000421827 TMOD4Q9NZQ9 345 aa21.75■■□□□ 1.07
UBXN11-208ENST00000421827 PTCH2Q9Y6C5 1203 aa21.75■■□□□ 1.07
UBXN11-208ENST00000421827 LOC285556D6RIA3 1793 aa21.74■■□□□ 1.07
UBXN11-208ENST00000421827 GLRX3O76003 335 aaKnown RBP21.74■■□□□ 1.07
UBXN11-208ENST00000421827 MX1P20591 662 aa21.74■■□□□ 1.07
UBXN11-208ENST00000421827 CTGFP29279 349 aa21.74■■□□□ 1.07
UBXN11-208ENST00000421827 MLLT1Q03111 559 aaPredicted RBP21.74■■□□□ 1.07
UBXN11-208ENST00000421827 EVX2Q03828 476 aa21.74■■□□□ 1.07
UBXN11-208ENST00000421827 PI4K2BQ8TCG2 481 aa21.74■■□□□ 1.07
UBXN11-208ENST00000421827 TRIM47Q96LD4 638 aa21.74■■□□□ 1.07
UBXN11-208ENST00000421827 CABP5Q9NP86 173 aa21.74■■□□□ 1.07
UBXN11-208ENST00000421827 SLC4A4Q9Y6R1 1079 aa21.74■■□□□ 1.07
UBXN11-208ENST00000421827 ZSWIM8A7E2V4 1837 aa21.73■■□□□ 1.07
UBXN11-208ENST00000421827 RNF113AO15541 343 aaKnown RBP21.73■■□□□ 1.07
UBXN11-208ENST00000421827 FMNL1O95466 1100 aaPredicted RBP21.73■■□□□ 1.07
UBXN11-208ENST00000421827 CYP2D6P10635 497 aa21.73■■□□□ 1.07
UBXN11-208ENST00000421827 OSBPP22059 807 aa21.73■■□□□ 1.07
UBXN11-208ENST00000421827 PRMT2P55345 433 aa21.73■■□□□ 1.07
UBXN11-208ENST00000421827 ARMC5Q96C12 935 aa21.73■■□□□ 1.07
UBXN11-208ENST00000421827 DDRGK1Q96HY6 314 aa21.73■■□□□ 1.07
UBXN11-208ENST00000421827 ZFYP08048 801 aaPredicted RBP21.72■■□□□ 1.07
UBXN11-208ENST00000421827 HOXD10P28358 340 aa21.72■■□□□ 1.07
UBXN11-208ENST00000421827 RAB3GAP1Q15042 981 aa21.72■■□□□ 1.07
UBXN11-208ENST00000421827 ASCC2Q9H1I8 757 aaPredicted RBP21.72■■□□□ 1.07
UBXN11-208ENST00000421827 SRRDQ9UH36 339 aa21.72■■□□□ 1.07
UBXN11-208ENST00000421827 TAOK2Q9UL54 1235 aa21.72■■□□□ 1.07
UBXN11-208ENST00000421827 SALL3Q9BXA9 1300 aa21.72■■□□□ 1.07
UBXN11-208ENST00000421827 FCGRTP55899 365 aa21.71■■□□□ 1.07
UBXN11-208ENST00000421827 LRRFIP1Q32MZ4 808 aaKnown RBP21.71■■□□□ 1.07
UBXN11-208ENST00000421827 SLC9C1Q4G0N8 1177 aa21.71■■□□□ 1.07
UBXN11-208ENST00000421827 AMOTL1Q8IY63 956 aa21.71■■□□□ 1.07
UBXN11-208ENST00000421827 EXOC6Q8TAG9 804 aa21.71■■□□□ 1.07
UBXN11-208ENST00000421827 APPBP2Q92624 585 aa21.71■■□□□ 1.07
UBXN11-208ENST00000421827 DYNLL2Q96FJ2 89 aa21.71■■□□□ 1.07
UBXN11-208ENST00000421827 STRBPQ96SI9 672 aaKnown RBP21.71■■□□□ 1.07
UBXN11-208ENST00000421827 SWAP70Q9UH65 585 aa21.71■■□□□ 1.07
UBXN11-208ENST00000421827 CENPFP49454 3210 aa21.71■■□□□ 1.07
UBXN11-208ENST00000421827 USP17L12C9JPN9 530 aa21.7■■□□□ 1.06
UBXN11-208ENST00000421827 USP17L21D6R901 530 aa21.7■■□□□ 1.06
UBXN11-208ENST00000421827 HOXA7P31268 230 aaPredicted RBP21.7■■□□□ 1.06
UBXN11-208ENST00000421827 GCLCP48506 637 aaPredicted RBP21.7■■□□□ 1.06
UBXN11-208ENST00000421827 C12orf60Q5U649 245 aa21.7■■□□□ 1.06
UBXN11-208ENST00000421827 USP17L2Q6R6M4 530 aa21.7■■□□□ 1.06
UBXN11-208ENST00000421827 NBPF11Q86T75 865 aa21.7■■□□□ 1.06
UBXN11-208ENST00000421827 ANKRD13CQ8N6S4 541 aa21.7■■□□□ 1.06
UBXN11-208ENST00000421827 OSBP2Q969R2 916 aa21.7■■□□□ 1.06
UBXN11-208ENST00000421827 RWDD1Q9H446 243 aaPredicted RBP21.7■■□□□ 1.06
UBXN11-208ENST00000421827 EMILIN3Q9NT22 766 aa21.7■■□□□ 1.06
UBXN11-208ENST00000421827 CYP2D7A0A087X1C5 515 aa21.69■■□□□ 1.06
UBXN11-208ENST00000421827 IRX3P78415 501 aaPredicted RBP21.69■■□□□ 1.06
UBXN11-208ENST00000421827 FAM110CQ1W6H9 321 aa21.69■■□□□ 1.06
UBXN11-208ENST00000421827 SLC44A5Q8NCS7 719 aa21.69■■□□□ 1.06
UBXN11-208ENST00000421827 FEZ1Q99689 392 aa21.69■■□□□ 1.06
UBXN11-208ENST00000421827 SUPT16HQ9Y5B9 1047 aaKnown RBP21.69■■□□□ 1.06
UBXN11-208ENST00000421827 MPHOSPH10O00566 681 aaKnown RBP21.68■■□□□ 1.06
UBXN11-208ENST00000421827 GUCY1A2P33402 732 aa21.68■■□□□ 1.06
UBXN11-208ENST00000421827 USP14P54578 494 aa21.68■■□□□ 1.06
UBXN11-208ENST00000421827 SEPT2Q15019 361 aa21.68■■□□□ 1.06
UBXN11-208ENST00000421827 CTR9Q6PD62 1173 aa21.68■■□□□ 1.06
UBXN11-208ENST00000421827 ZNF333Q96JL9 665 aa21.68■■□□□ 1.06
UBXN11-208ENST00000421827 C12orf42Q96LP6 360 aa21.68■■□□□ 1.06
UBXN11-208ENST00000421827 FSD1Q9BTV5 496 aa21.68■■□□□ 1.06
UBXN11-208ENST00000421827 STAP2Q9UGK3 403 aa21.68■■□□□ 1.06
UBXN11-208ENST00000421827 MYPNQ86TC9 1320 aa21.68■■□□□ 1.06
UBXN11-208ENST00000421827 BAZ2AQ9UIF9 1905 aaKnown RBP21.68■■□□□ 1.06
UBXN11-208ENST00000421827 ZYXQ15942 572 aaKnown RBP21.67■■□□□ 1.06
UBXN11-208ENST00000421827 SMC5Q8IY18 1101 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms