RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 TESPA1A2RU30 521 aaPredicted RBP23.11■■□□□ 1.29
GCDH-202ENST00000421816 IRF6O14896 467 aa23.11■■□□□ 1.29
GCDH-202ENST00000421816 INHBEP58166 350 aa23.11■■□□□ 1.29
GCDH-202ENST00000421816 SREBF2Q12772 1141 aa23.11■■□□□ 1.29
GCDH-202ENST00000421816 C16orf86Q6ZW13 317 aa23.11■■□□□ 1.29
GCDH-202ENST00000421816 SLC44A5Q8NCS7 719 aa23.11■■□□□ 1.29
GCDH-202ENST00000421816 NAPBQ9H115 298 aa23.11■■□□□ 1.29
GCDH-202ENST00000421816 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.11■■□□□ 1.29
GCDH-202ENST00000421816 KCNH4Q9UQ05 1017 aa23.11■■□□□ 1.29
GCDH-202ENST00000421816 GDF11O95390 407 aa23.1■■□□□ 1.29
GCDH-202ENST00000421816 ASNSP08243 561 aa23.1■■□□□ 1.29
GCDH-202ENST00000421816 HSPD1P10809 573 aaKnown RBP23.1■■□□□ 1.29
GCDH-202ENST00000421816 GTF2A2P52657 109 aa23.1■■□□□ 1.29
GCDH-202ENST00000421816 CERKLQ49MI3 558 aaPredicted RBP23.1■■□□□ 1.29
GCDH-202ENST00000421816 AFG3L2Q9Y4W6 797 aa23.1■■□□□ 1.29
GCDH-202ENST00000421816 ZHX2Q9Y6X8 837 aa23.1■■□□□ 1.29
GCDH-202ENST00000421816 PTPRFP10586 1907 aa23.1■■□□□ 1.29
GCDH-202ENST00000421816 RAD50Q92878 1312 aa23.09■■□□□ 1.29
GCDH-202ENST00000421816 MINDY4BA8MYZ0 360 aa23.09■■□□□ 1.29
GCDH-202ENST00000421816 CDK8P49336 464 aa23.09■■□□□ 1.29
GCDH-202ENST00000421816 SHROOM1Q2M3G4 852 aaPredicted RBP23.09■■□□□ 1.29
GCDH-202ENST00000421816 TBC1D2Q9BYX2 928 aa23.09■■□□□ 1.29
GCDH-202ENST00000421816 IL25Q9H293 177 aa23.09■■□□□ 1.29
GCDH-202ENST00000421816 ZBTB21Q9ULJ3 1066 aa23.09■■□□□ 1.29
GCDH-202ENST00000421816 ZMYM6O95789 1325 aa23.08■■□□□ 1.29
GCDH-202ENST00000421816 USP17L5A8MUK1 530 aa23.08■■□□□ 1.29
GCDH-202ENST00000421816 CXCL11O14625 94 aa23.08■■□□□ 1.29
GCDH-202ENST00000421816 HSPA1AP0DMV8 641 aaKnown RBP23.08■■□□□ 1.29
GCDH-202ENST00000421816 HSPA1BP0DMV9 641 aaKnown RBP23.08■■□□□ 1.29
GCDH-202ENST00000421816 SNAPC2Q13487 334 aa23.08■■□□□ 1.29
GCDH-202ENST00000421816 CCDC84Q86UT8 332 aaPredicted RBP23.08■■□□□ 1.29
GCDH-202ENST00000421816 RUFY2Q8WXA3 655 aa23.08■■□□□ 1.29
GCDH-202ENST00000421816 GH2P01242 217 aa23.07■■□□□ 1.28
GCDH-202ENST00000421816 FGAP02671 866 aa23.07■■□□□ 1.28
GCDH-202ENST00000421816 ABCB5Q2M3G0 1257 aa23.07■■□□□ 1.28
GCDH-202ENST00000421816 BRI3BPQ8WY22 251 aa23.07■■□□□ 1.28
GCDH-202ENST00000421816 CCL15-CCL14A0A0B4J2E2 113 aa23.06■■□□□ 1.28
GCDH-202ENST00000421816 CETPP11597 493 aa23.06■■□□□ 1.28
GCDH-202ENST00000421816 PPARAQ07869 468 aa23.06■■□□□ 1.28
GCDH-202ENST00000421816 CCL15Q16663 113 aa23.06■■□□□ 1.28
GCDH-202ENST00000421816 IFNL1Q8IU54 200 aa23.06■■□□□ 1.28
GCDH-202ENST00000421816 PTPN18Q99952 460 aa23.06■■□□□ 1.28
GCDH-202ENST00000421816 WDR18Q9BV38 432 aa23.06■■□□□ 1.28
GCDH-202ENST00000421816 PCNTO95613 3336 aa23.06■■□□□ 1.28
GCDH-202ENST00000421816 IGF2BP3O00425 579 aaKnown RBP eCLIP23.05■■□□□ 1.28
GCDH-202ENST00000421816 GUCY1A2P33402 732 aa23.05■■□□□ 1.28
GCDH-202ENST00000421816 ZNF280CQ8ND82 737 aa23.05■■□□□ 1.28
GCDH-202ENST00000421816 CCDC17Q96LX7 622 aa23.05■■□□□ 1.28
GCDH-202ENST00000421816 BEGAINQ9BUH8 593 aa23.05■■□□□ 1.28
GCDH-202ENST00000421816 DSCC1Q9BVC3 393 aa23.05■■□□□ 1.28
GCDH-202ENST00000421816 AS3MTQ9HBK9 375 aa23.05■■□□□ 1.28
GCDH-202ENST00000421816 CABP5Q9NP86 173 aa23.05■■□□□ 1.28
GCDH-202ENST00000421816 RNF186Q9NXI6 227 aa23.05■■□□□ 1.28
GCDH-202ENST00000421816 SAGE1Q9NXZ1 904 aa23.05■■□□□ 1.28
GCDH-202ENST00000421816 ANAPC4Q9UJX5 808 aa23.05■■□□□ 1.28
GCDH-202ENST00000421816 GREB1LQ9C091 1923 aaPredicted RBP23.04■■□□□ 1.28
GCDH-202ENST00000421816 LAMA4Q16363 1823 aa23.04■■□□□ 1.28
GCDH-202ENST00000421816 A0A0G2JLL6 359 aaPredicted RBP23.04■■□□□ 1.28
GCDH-202ENST00000421816 SGSM2O43147 1006 aa23.04■■□□□ 1.28
GCDH-202ENST00000421816 CA12O43570 354 aa23.04■■□□□ 1.28
GCDH-202ENST00000421816 MOGSQ13724 837 aa23.04■■□□□ 1.28
GCDH-202ENST00000421816 PRRT2Q7Z6L0 340 aaPredicted RBP23.04■■□□□ 1.28
GCDH-202ENST00000421816 FOXN1O15353 648 aa23.03■■□□□ 1.28
GCDH-202ENST00000421816 AKR1B1P15121 316 aa23.03■■□□□ 1.28
GCDH-202ENST00000421816 RASA1P20936 1047 aa23.03■■□□□ 1.28
GCDH-202ENST00000421816 SPP2Q13103 211 aa23.03■■□□□ 1.28
GCDH-202ENST00000421816 LOC285556D6RIA3 1793 aa23.03■■□□□ 1.28
GCDH-202ENST00000421816 TRIM75PA6NK02 468 aa23.02■■□□□ 1.28
GCDH-202ENST00000421816 ALDH1A1P00352 501 aa23.02■■□□□ 1.28
GCDH-202ENST00000421816 SLC3A2P08195 630 aaKnown RBP23.02■■□□□ 1.28
GCDH-202ENST00000421816 TMEM179Q6ZVK1 233 aa23.02■■□□□ 1.28
GCDH-202ENST00000421816 STK11IPQ8N1F8 1099 aa23.02■■□□□ 1.28
GCDH-202ENST00000421816 ZNF287Q9HBT7 754 aa23.02■■□□□ 1.28
GCDH-202ENST00000421816 TRPA1O75762 1119 aa23.01■■□□□ 1.27
GCDH-202ENST00000421816 CTDSPL2Q05D32 466 aa23.01■■□□□ 1.27
GCDH-202ENST00000421816 PDE4BQ07343 736 aa23.01■■□□□ 1.27
GCDH-202ENST00000421816 SEPT2Q15019 361 aa23.01■■□□□ 1.27
GCDH-202ENST00000421816 RAB3GAP1Q15042 981 aa23.01■■□□□ 1.27
GCDH-202ENST00000421816 SH3D19Q5HYK7 790 aa23.01■■□□□ 1.27
GCDH-202ENST00000421816 OTUD7BQ6GQQ9 843 aa23.01■■□□□ 1.27
GCDH-202ENST00000421816 CFHR5Q9BXR6 569 aa23.01■■□□□ 1.27
GCDH-202ENST00000421816 MKNK2Q9HBH9 465 aa23.01■■□□□ 1.27
GCDH-202ENST00000421816 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.01■■□□□ 1.27
GCDH-202ENST00000421816 BTBD19C9JJ37 291 aa23■■□□□ 1.27
GCDH-202ENST00000421816 MPHOSPH10O00566 681 aaKnown RBP23■■□□□ 1.27
GCDH-202ENST00000421816 FGRP09769 529 aa23■■□□□ 1.27
GCDH-202ENST00000421816 FASTKD5Q7L8L6 764 aaKnown RBP23■■□□□ 1.27
GCDH-202ENST00000421816 FAM43AQ8N2R8 423 aa23■■□□□ 1.27
GCDH-202ENST00000421816 ESYT1Q9BSJ8 1104 aa23■■□□□ 1.27
GCDH-202ENST00000421816 ZCCHC17Q9NP64 241 aaKnown RBP23■■□□□ 1.27
GCDH-202ENST00000421816 TACC3Q9Y6A5 838 aa23■■□□□ 1.27
GCDH-202ENST00000421816 PRDM1O75626 825 aa22.99■■□□□ 1.27
GCDH-202ENST00000421816 BACE1P56817 501 aa22.99■■□□□ 1.27
GCDH-202ENST00000421816 GPAT2Q6NUI2 795 aa22.99■■□□□ 1.27
GCDH-202ENST00000421816 ANKRD23Q86SG2 305 aa22.99■■□□□ 1.27
GCDH-202ENST00000421816 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.99■■□□□ 1.27
GCDH-202ENST00000421816 C19orf81C9J6K1 198 aa22.98■■□□□ 1.27
GCDH-202ENST00000421816 USP17L10C9JJH3 530 aa22.98■■□□□ 1.27
GCDH-202ENST00000421816 CDC45O75419 566 aa22.98■■□□□ 1.27
GCDH-202ENST00000421816 HSPA8P11142 646 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms