RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 USP17L5A8MUK1 530 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 SMIM22K7EJ46 135 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 GH2P01242 217 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 ASNSP08243 561 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 SHMT1P34896 483 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 TM4SF4P48230 202 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 GABPAQ06546 454 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 CCL15Q16663 113 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 ABCB5Q2M3G0 1257 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 OTUD7BQ6GQQ9 843 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 CCDC84Q86UT8 332 aaPredicted RBP18.8■□□□□ 0.6
BRAT1-202ENST00000421712 SLC44A5Q8NCS7 719 aa18.8■□□□□ 0.6
BRAT1-202ENST00000421712 TRIM75PA6NK02 468 aa18.79■□□□□ 0.6
BRAT1-202ENST00000421712 TRPA1O75762 1119 aa18.79■□□□□ 0.6
BRAT1-202ENST00000421712 SLC3A2P08195 630 aaKnown RBP18.79■□□□□ 0.6
BRAT1-202ENST00000421712 HSPD1P10809 573 aaKnown RBP18.79■□□□□ 0.6
BRAT1-202ENST00000421712 CETPP11597 493 aa18.79■□□□□ 0.6
BRAT1-202ENST00000421712 CDK8P49336 464 aa18.79■□□□□ 0.6
BRAT1-202ENST00000421712 MKNK2Q9HBH9 465 aa18.79■□□□□ 0.6
BRAT1-202ENST00000421712 AS3MTQ9HBK9 375 aa18.79■□□□□ 0.6
BRAT1-202ENST00000421712 PCNTO95613 3336 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 DOCK1Q14185 1865 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 CHMLP26374 656 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 SPP2Q13103 211 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 RAB3GAP1Q15042 981 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
BRAT1-202ENST00000421712 C16orf86Q6ZW13 317 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 IFNL1Q8IU54 200 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 MS4A4AQ96JQ5 239 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 GINM1Q9NU53 330 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 RNF186Q9NXI6 227 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 TAOK2Q9UL54 1235 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 ZBTB21Q9ULJ3 1066 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 AFG3L2Q9Y4W6 797 aa18.78■□□□□ 0.6
BRAT1-202ENST00000421712 DDX60LQ5H9U9 1706 aaKnown RBP18.77■□□□□ 0.6
BRAT1-202ENST00000421712 CXCL11O14625 94 aa18.77■□□□□ 0.6
BRAT1-202ENST00000421712 CA12O43570 354 aa18.77■□□□□ 0.6
BRAT1-202ENST00000421712 JAG1P78504 1218 aa18.77■□□□□ 0.6
BRAT1-202ENST00000421712 BMP2KLQ5H9B9 411 aa18.77■□□□□ 0.6
BRAT1-202ENST00000421712 ZNF280CQ8ND82 737 aa18.77■□□□□ 0.6
BRAT1-202ENST00000421712 TBC1D2Q9BYX2 928 aa18.77■□□□□ 0.6
BRAT1-202ENST00000421712 ZNF287Q9HBT7 754 aa18.77■□□□□ 0.6
BRAT1-202ENST00000421712 TSKSQ9UJT2 592 aa18.77■□□□□ 0.6
BRAT1-202ENST00000421712 THSD7BQ9C0I4 1608 aa18.76■□□□□ 0.59
BRAT1-202ENST00000421712 FOXN1O15353 648 aa18.76■□□□□ 0.59
BRAT1-202ENST00000421712 FGAP02671 866 aa18.76■□□□□ 0.59
BRAT1-202ENST00000421712 PPARAQ07869 468 aa18.76■□□□□ 0.59
BRAT1-202ENST00000421712 ALX1Q15699 326 aa18.76■□□□□ 0.59
BRAT1-202ENST00000421712 GADL1Q6ZQY3 521 aa18.76■□□□□ 0.59
BRAT1-202ENST00000421712 ZNF444Q8N0Y2 327 aaPredicted RBP18.76■□□□□ 0.59
BRAT1-202ENST00000421712 BRI3BPQ8WY22 251 aa18.76■□□□□ 0.59
BRAT1-202ENST00000421712 KCNH4Q9UQ05 1017 aa18.76■□□□□ 0.59
BRAT1-202ENST00000421712 ATAD5Q96QE3 1844 aa18.75■□□□□ 0.59
BRAT1-202ENST00000421712 TESPA1A2RU30 521 aaPredicted RBP18.75■□□□□ 0.59
BRAT1-202ENST00000421712 FOXP2O15409 715 aa18.75■□□□□ 0.59
BRAT1-202ENST00000421712 ALDH1A1P00352 501 aa18.75■□□□□ 0.59
BRAT1-202ENST00000421712 CTCFP49711 727 aaPredicted RBP18.75■□□□□ 0.59
BRAT1-202ENST00000421712 PDE4BQ07343 736 aa18.75■□□□□ 0.59
BRAT1-202ENST00000421712 CCDC17Q96LX7 622 aa18.75■□□□□ 0.59
BRAT1-202ENST00000421712 PTPN18Q99952 460 aa18.75■□□□□ 0.59
BRAT1-202ENST00000421712 IGF2BP3O00425 579 aaKnown RBP eCLIP18.74■□□□□ 0.59
BRAT1-202ENST00000421712 PRDM1O75626 825 aa18.74■□□□□ 0.59
BRAT1-202ENST00000421712 TBC1D8O95759 1140 aa18.74■□□□□ 0.59
BRAT1-202ENST00000421712 AKR1B1P15121 316 aa18.74■□□□□ 0.59
BRAT1-202ENST00000421712 CTDSPL2Q05D32 466 aa18.74■□□□□ 0.59
BRAT1-202ENST00000421712 SEPT2Q15019 361 aa18.74■□□□□ 0.59
BRAT1-202ENST00000421712 TMEM179Q6ZVK1 233 aa18.74■□□□□ 0.59
BRAT1-202ENST00000421712 FASTKD5Q7L8L6 764 aaKnown RBP18.74■□□□□ 0.59
BRAT1-202ENST00000421712 FEZ1Q99689 392 aa18.74■□□□□ 0.59
BRAT1-202ENST00000421712 RAD50Q92878 1312 aa18.74■□□□□ 0.59
BRAT1-202ENST00000421712 MYH8P13535 1937 aa18.73■□□□□ 0.59
BRAT1-202ENST00000421712 A0A0G2JLL6 359 aaPredicted RBP18.73■□□□□ 0.59
BRAT1-202ENST00000421712 BTBD19C9JJ37 291 aa18.73■□□□□ 0.59
BRAT1-202ENST00000421712 HAND2P61296 217 aa18.73■□□□□ 0.59
BRAT1-202ENST00000421712 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
BRAT1-202ENST00000421712 PRRT2Q7Z6L0 340 aaPredicted RBP18.73■□□□□ 0.59
BRAT1-202ENST00000421712 WDR18Q9BV38 432 aa18.73■□□□□ 0.59
BRAT1-202ENST00000421712 TOMM22Q9NS69 142 aa18.73■□□□□ 0.59
BRAT1-202ENST00000421712 SAGE1Q9NXZ1 904 aa18.73■□□□□ 0.59
BRAT1-202ENST00000421712 TMOD4Q9NZQ9 345 aa18.73■□□□□ 0.59
BRAT1-202ENST00000421712 USP17L10C9JJH3 530 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 ZNF213O14771 459 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 LBX1P52954 281 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 HMGCS2P54868 508 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 ATP2B2Q01814 1243 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 MTMR2Q13614 643 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 KIAA1211Q6ZU35 1233 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 FAM43AQ8N2R8 423 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 DSCC1Q9BVC3 393 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 IL25Q9H293 177 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 CTNNA3Q9UI47 895 aa18.72■□□□□ 0.59
BRAT1-202ENST00000421712 ROBO3Q96MS0 1386 aa18.71■□□□□ 0.59
BRAT1-202ENST00000421712 C19orf81C9J6K1 198 aa18.71■□□□□ 0.59
BRAT1-202ENST00000421712 HSPA8P11142 646 aaKnown RBP18.71■□□□□ 0.59
BRAT1-202ENST00000421712 RASA1P20936 1047 aa18.71■□□□□ 0.59
BRAT1-202ENST00000421712 BACE1P56817 501 aa18.71■□□□□ 0.59
BRAT1-202ENST00000421712 TAF1CQ15572 869 aaPredicted RBP18.71■□□□□ 0.59
BRAT1-202ENST00000421712 ZYXQ15942 572 aaKnown RBP18.71■□□□□ 0.59
BRAT1-202ENST00000421712 PDHXO00330 501 aa18.7■□□□□ 0.58
BRAT1-202ENST00000421712 SGSM2O43147 1006 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms