RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 MTMR2Q13614 643 aa21.15■□□□□ 0.98
MSH6-203ENST00000420813 MAGEB6Q8N7X4 407 aa21.15■□□□□ 0.98
MSH6-203ENST00000420813 RHPN1Q8TCX5 695 aa21.15■□□□□ 0.98
MSH6-203ENST00000420813 ZBTB21Q9ULJ3 1066 aa21.15■□□□□ 0.98
MSH6-203ENST00000420813 NAV1Q8NEY1 1877 aa21.15■□□□□ 0.98
MSH6-203ENST00000420813 PLXNB2O15031 1838 aa21.14■□□□□ 0.97
MSH6-203ENST00000420813 CAPN2P17655 700 aa21.14■□□□□ 0.97
MSH6-203ENST00000420813 HOXA7P31268 230 aaPredicted RBP21.14■□□□□ 0.97
MSH6-203ENST00000420813 JAG1P78504 1218 aa21.14■□□□□ 0.97
MSH6-203ENST00000420813 RPAP2Q8IXW5 612 aaPredicted RBP21.14■□□□□ 0.97
MSH6-203ENST00000420813 MIGA1Q8NAN2 632 aa21.14■□□□□ 0.97
MSH6-203ENST00000420813 ANTXR1Q9H6X2 564 aa21.14■□□□□ 0.97
MSH6-203ENST00000420813 TMOD4Q9NZQ9 345 aa21.14■□□□□ 0.97
MSH6-203ENST00000420813 SAP30BPQ9UHR5 308 aaKnown RBP21.14■□□□□ 0.97
MSH6-203ENST00000420813 DDX19BQ9UMR2 479 aa21.14■□□□□ 0.97
MSH6-203ENST00000420813 USP17L10C9JJH3 530 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 HMMRO75330 724 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 GDF11O95390 407 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 ELNP15502 786 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 USP5P45974 858 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 TTF1Q15361 905 aaPredicted RBP21.13■□□□□ 0.97
MSH6-203ENST00000420813 HABP4Q5JVS0 413 aaKnown RBP21.13■□□□□ 0.97
MSH6-203ENST00000420813 UBE2Q1Q7Z7E8 422 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 KIF1BPQ96EK5 621 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 EHD4Q9H223 541 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 IL1RAPL2Q9NP60 686 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 MORF4L1Q9UBU8 362 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 NDUFB9Q9Y6M9 179 aa21.13■□□□□ 0.97
MSH6-203ENST00000420813 INHAP05111 366 aa21.12■□□□□ 0.97
MSH6-203ENST00000420813 IRX3P78415 501 aaPredicted RBP21.12■□□□□ 0.97
MSH6-203ENST00000420813 CLASRPQ8N2M8 674 aaKnown RBP21.12■□□□□ 0.97
MSH6-203ENST00000420813 UNC93B1Q9H1C4 597 aa21.12■□□□□ 0.97
MSH6-203ENST00000420813 TATDN1Q6P1N9 297 aa21.11■□□□□ 0.97
MSH6-203ENST00000420813 TTC6Q86TZ1 520 aa21.11■□□□□ 0.97
MSH6-203ENST00000420813 U2AF1L4Q8WU68 220 aaKnown RBP21.11■□□□□ 0.97
MSH6-203ENST00000420813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.11■□□□□ 0.97
MSH6-203ENST00000420813 CHMP4BQ9H444 224 aaKnown RBP21.11■□□□□ 0.97
MSH6-203ENST00000420813 ZBTB40Q9NUA8 1239 aa21.11■□□□□ 0.97
MSH6-203ENST00000420813 SERPINB13Q9UIV8 391 aa21.11■□□□□ 0.97
MSH6-203ENST00000420813 MYH7P12883 1935 aa21.11■□□□□ 0.97
MSH6-203ENST00000420813 MYH8P13535 1937 aa21.1■□□□□ 0.97
MSH6-203ENST00000420813 SGPL1O95470 568 aa21.1■□□□□ 0.97
MSH6-203ENST00000420813 SHROOM1Q2M3G4 852 aaPredicted RBP21.1■□□□□ 0.97
MSH6-203ENST00000420813 RIOK1Q9BRS2 568 aaKnown RBP21.09■□□□□ 0.97
MSH6-203ENST00000420813 HTATIP2Q9BUP3 242 aa21.09■□□□□ 0.97
MSH6-203ENST00000420813 PAK6Q9NQU5 681 aaPredicted RBP21.09■□□□□ 0.97
MSH6-203ENST00000420813 COG6Q9Y2V7 657 aa21.09■□□□□ 0.97
MSH6-203ENST00000420813 RAB11FIP3O75154 756 aa21.08■□□□□ 0.97
MSH6-203ENST00000420813 GH2P01242 217 aa21.08■□□□□ 0.97
MSH6-203ENST00000420813 HERVK_113P62684 666 aa21.08■□□□□ 0.97
MSH6-203ENST00000420813 USP17L2Q6R6M4 530 aa21.08■□□□□ 0.97
MSH6-203ENST00000420813 SIRT2Q8IXJ6 389 aa21.08■□□□□ 0.97
MSH6-203ENST00000420813 GTF3C2Q8WUA4 911 aaPredicted RBP21.08■□□□□ 0.97
MSH6-203ENST00000420813 P2RX7Q99572 595 aaKnown RBP21.08■□□□□ 0.97
MSH6-203ENST00000420813 GJD2Q9UKL4 321 aa21.08■□□□□ 0.97
MSH6-203ENST00000420813 TAOK2Q9UL54 1235 aa21.08■□□□□ 0.97
MSH6-203ENST00000420813 MAGEB6P1A0A0J9YX57 407 aa21.07■□□□□ 0.96
MSH6-203ENST00000420813 H0YGN5 161 aa21.07■□□□□ 0.96
MSH6-203ENST00000420813 FARP2O94887 1054 aaPredicted RBP21.07■□□□□ 0.96
MSH6-203ENST00000420813 IFIT2P09913 472 aaKnown RBP21.07■□□□□ 0.96
MSH6-203ENST00000420813 PDE6AP16499 860 aa21.07■□□□□ 0.96
MSH6-203ENST00000420813 SLC9C2Q5TAH2 1124 aa21.07■□□□□ 0.96
MSH6-203ENST00000420813 C12orf42Q96LP6 360 aa21.07■□□□□ 0.96
MSH6-203ENST00000420813 EMILIN3Q9NT22 766 aa21.07■□□□□ 0.96
MSH6-203ENST00000420813 HMGCRP04035 888 aa21.06■□□□□ 0.96
MSH6-203ENST00000420813 GPRC5AQ8NFJ5 357 aa21.06■□□□□ 0.96
MSH6-203ENST00000420813 DPF3Q92784 378 aa21.06■□□□□ 0.96
MSH6-203ENST00000420813 RCAN3Q9UKA8 241 aa21.06■□□□□ 0.96
MSH6-203ENST00000420813 TRIOBPQ9H2D6 2365 aa21.05■□□□□ 0.96
MSH6-203ENST00000420813 APBB1O00213 710 aa21.05■□□□□ 0.96
MSH6-203ENST00000420813 CERKLQ49MI3 558 aaPredicted RBP21.05■□□□□ 0.96
MSH6-203ENST00000420813 DEFB118Q96PH6 123 aa21.05■□□□□ 0.96
MSH6-203ENST00000420813 CRNKL1Q9BZJ0 848 aaKnown RBP21.05■□□□□ 0.96
MSH6-203ENST00000420813 CRISPLD2Q9H0B8 497 aa21.05■□□□□ 0.96
MSH6-203ENST00000420813 TXNRD2Q9NNW7 524 aa21.05■□□□□ 0.96
MSH6-203ENST00000420813 BAZ2AQ9UIF9 1905 aaKnown RBP21.04■□□□□ 0.96
MSH6-203ENST00000420813 GOLIM4O00461 696 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 PLCD1P51178 756 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 USP14P54578 494 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 ABCB5Q2M3G0 1257 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 SOCS4Q8WXH5 440 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 DNAJC2Q99543 621 aaKnown RBP21.04■□□□□ 0.96
MSH6-203ENST00000420813 FEZ1Q99689 392 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 KIAA1683Q9H0B3 1180 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.04■□□□□ 0.964e-8■■□□□ 12.3
MSH6-203ENST00000420813 CABP5Q9NP86 173 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 RBPJLQ9UBG7 517 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 COLQQ9Y215 455 aaPredicted RBP21.04■□□□□ 0.96
MSH6-203ENST00000420813 ALPK3Q96L96 1907 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 ZNF532Q9HCE3 1301 aa21.04■□□□□ 0.96
MSH6-203ENST00000420813 TCRBV5S4A2TA0A5A2 114 aa21.03■□□□□ 0.96
MSH6-203ENST00000420813 TFRCP02786 760 aaKnown RBP21.03■□□□□ 0.96
MSH6-203ENST00000420813 POLR3DP05423 398 aaPredicted RBP21.03■□□□□ 0.96
MSH6-203ENST00000420813 MAPK4P31152 587 aa21.03■□□□□ 0.96
MSH6-203ENST00000420813 SHMT1P34896 483 aa21.03■□□□□ 0.96
MSH6-203ENST00000420813 ERVK-9P63128 1117 aa21.03■□□□□ 0.96
MSH6-203ENST00000420813 ERVK-24P63145 666 aa21.03■□□□□ 0.96
MSH6-203ENST00000420813 GABPAQ06546 454 aa21.03■□□□□ 0.96
MSH6-203ENST00000420813 NUDT12Q9BQG2 462 aa21.03■□□□□ 0.96
MSH6-203ENST00000420813 USP17L15C9J2P7 530 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms