RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 IL25Q9H293 177 aa24.64■■□□□ 1.54
HMGXB4-203ENST00000420166 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.64■■□□□ 1.54
HMGXB4-203ENST00000420166 CERKLQ49MI3 558 aaPredicted RBP24.63■■□□□ 1.53
HMGXB4-203ENST00000420166 REM2Q8IYK8 340 aaPredicted RBP24.63■■□□□ 1.53
HMGXB4-203ENST00000420166 GINM1Q9NU53 330 aa24.63■■□□□ 1.53
HMGXB4-203ENST00000420166 PTPRFP10586 1907 aa24.63■■□□□ 1.53
HMGXB4-203ENST00000420166 MANSC4A6NHS7 340 aaPredicted RBP24.62■■□□□ 1.53
HMGXB4-203ENST00000420166 IRF6O14896 467 aa24.62■■□□□ 1.53
HMGXB4-203ENST00000420166 ASNSP08243 561 aa24.62■■□□□ 1.53
HMGXB4-203ENST00000420166 JAG1P78504 1218 aa24.62■■□□□ 1.53
HMGXB4-203ENST00000420166 MAP2K1Q02750 393 aaPredicted RBP24.62■■□□□ 1.53
HMGXB4-203ENST00000420166 SHROOM1Q2M3G4 852 aaPredicted RBP24.62■■□□□ 1.53
HMGXB4-203ENST00000420166 ZBTB21Q9ULJ3 1066 aa24.62■■□□□ 1.53
HMGXB4-203ENST00000420166 ZMYM6O95789 1325 aa24.61■■□□□ 1.53
HMGXB4-203ENST00000420166 CDK8P49336 464 aa24.61■■□□□ 1.53
HMGXB4-203ENST00000420166 SREBF2Q12772 1141 aa24.61■■□□□ 1.53
HMGXB4-203ENST00000420166 CCDC84Q86UT8 332 aaPredicted RBP24.61■■□□□ 1.53
HMGXB4-203ENST00000420166 MS4A4AQ96JQ5 239 aa24.61■■□□□ 1.53
HMGXB4-203ENST00000420166 KCNH4Q9UQ05 1017 aa24.61■■□□□ 1.53
HMGXB4-203ENST00000420166 ZHX2Q9Y6X8 837 aa24.61■■□□□ 1.53
HMGXB4-203ENST00000420166 GH2P01242 217 aa24.6■■□□□ 1.53
HMGXB4-203ENST00000420166 FGAP02671 866 aa24.6■■□□□ 1.53
HMGXB4-203ENST00000420166 GTF2A2P52657 109 aa24.6■■□□□ 1.53
HMGXB4-203ENST00000420166 PPARAQ07869 468 aa24.6■■□□□ 1.53
HMGXB4-203ENST00000420166 ABCB5Q2M3G0 1257 aa24.6■■□□□ 1.53
HMGXB4-203ENST00000420166 WBP1LQ9NX94 342 aa24.6■■□□□ 1.53
HMGXB4-203ENST00000420166 LAMA4Q16363 1823 aa24.59■■□□□ 1.53
HMGXB4-203ENST00000420166 USP17L5A8MUK1 530 aa24.59■■□□□ 1.53
HMGXB4-203ENST00000420166 SGSM2O43147 1006 aa24.59■■□□□ 1.53
HMGXB4-203ENST00000420166 TM4SF4P48230 202 aa24.59■■□□□ 1.53
HMGXB4-203ENST00000420166 SNAPC2Q13487 334 aa24.59■■□□□ 1.53
HMGXB4-203ENST00000420166 DSCC1Q9BVC3 393 aa24.59■■□□□ 1.53
HMGXB4-203ENST00000420166 AFG3L2Q9Y4W6 797 aa24.59■■□□□ 1.53
HMGXB4-203ENST00000420166 INHBEP58166 350 aa24.58■■□□□ 1.53
HMGXB4-203ENST00000420166 STK11IPQ8N1F8 1099 aa24.58■■□□□ 1.53
HMGXB4-203ENST00000420166 TBC1D2Q9BYX2 928 aa24.58■■□□□ 1.53
HMGXB4-203ENST00000420166 CABP5Q9NP86 173 aa24.58■■□□□ 1.53
HMGXB4-203ENST00000420166 TESPA1A2RU30 521 aaPredicted RBP24.57■■□□□ 1.52
HMGXB4-203ENST00000420166 CXCL11O14625 94 aa24.57■■□□□ 1.52
HMGXB4-203ENST00000420166 SLC3A2P08195 630 aaKnown RBP24.57■■□□□ 1.52
HMGXB4-203ENST00000420166 CETPP11597 493 aa24.57■■□□□ 1.52
HMGXB4-203ENST00000420166 BRI3BPQ8WY22 251 aa24.57■■□□□ 1.52
HMGXB4-203ENST00000420166 CCDC17Q96LX7 622 aa24.57■■□□□ 1.52
HMGXB4-203ENST00000420166 ANAPC4Q9UJX5 808 aa24.57■■□□□ 1.52
HMGXB4-203ENST00000420166 CCL15-CCL14A0A0B4J2E2 113 aa24.56■■□□□ 1.52
HMGXB4-203ENST00000420166 CDC45O75419 566 aa24.56■■□□□ 1.52
HMGXB4-203ENST00000420166 AKR1B1P15121 316 aa24.56■■□□□ 1.52
HMGXB4-203ENST00000420166 CCL15Q16663 113 aa24.56■■□□□ 1.52
HMGXB4-203ENST00000420166 BEGAINQ9BUH8 593 aa24.56■■□□□ 1.52
HMGXB4-203ENST00000420166 WDR18Q9BV38 432 aa24.56■■□□□ 1.52
HMGXB4-203ENST00000420166 AS3MTQ9HBK9 375 aa24.56■■□□□ 1.52
HMGXB4-203ENST00000420166 GREB1LQ9C091 1923 aaPredicted RBP24.56■■□□□ 1.52
HMGXB4-203ENST00000420166 PCNTO95613 3336 aa24.56■■□□□ 1.52
HMGXB4-203ENST00000420166 TRIM75PA6NK02 468 aa24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 MPHOSPH10O00566 681 aaKnown RBP24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 HSPA1AP0DMV8 641 aaKnown RBP24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 HSPA1BP0DMV9 641 aaKnown RBP24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 RASA1P20936 1047 aa24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 GUCY1A2P33402 732 aa24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 CTDSPL2Q05D32 466 aa24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 IFNL1Q8IU54 200 aa24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 ZNF280CQ8ND82 737 aa24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 ESYT1Q9BSJ8 1104 aa24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 MKNK2Q9HBH9 465 aa24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 ZNF287Q9HBT7 754 aa24.55■■□□□ 1.52
HMGXB4-203ENST00000420166 PDE4BQ07343 736 aa24.54■■□□□ 1.52
HMGXB4-203ENST00000420166 SPP2Q13103 211 aa24.54■■□□□ 1.52
HMGXB4-203ENST00000420166 SEPT2Q15019 361 aa24.54■■□□□ 1.52
HMGXB4-203ENST00000420166 RAB3GAP1Q15042 981 aa24.54■■□□□ 1.52
HMGXB4-203ENST00000420166 TMEM179Q6ZVK1 233 aa24.54■■□□□ 1.52
HMGXB4-203ENST00000420166 PTPN18Q99952 460 aa24.54■■□□□ 1.52
HMGXB4-203ENST00000420166 LOC285556D6RIA3 1793 aa24.53■■□□□ 1.52
HMGXB4-203ENST00000420166 A0A0G2JLL6 359 aaPredicted RBP24.53■■□□□ 1.52
HMGXB4-203ENST00000420166 IGF2BP3O00425 579 aaKnown RBP eCLIP24.53■■□□□ 1.52
HMGXB4-203ENST00000420166 PRDM1O75626 825 aa24.53■■□□□ 1.52
HMGXB4-203ENST00000420166 CASC1Q6TDU7 716 aa24.53■■□□□ 1.52
HMGXB4-203ENST00000420166 PRRT2Q7Z6L0 340 aaPredicted RBP24.53■■□□□ 1.52
HMGXB4-203ENST00000420166 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.53■■□□□ 1.52
HMGXB4-203ENST00000420166 CA12O43570 354 aa24.52■■□□□ 1.52
HMGXB4-203ENST00000420166 HAND2P61296 217 aa24.52■■□□□ 1.52
HMGXB4-203ENST00000420166 PTH1RQ03431 593 aa24.52■■□□□ 1.52
HMGXB4-203ENST00000420166 MOGSQ13724 837 aa24.52■■□□□ 1.52
HMGXB4-203ENST00000420166 RNF186Q9NXI6 227 aa24.52■■□□□ 1.52
HMGXB4-203ENST00000420166 CTNNA3Q9UI47 895 aa24.52■■□□□ 1.52
HMGXB4-203ENST00000420166 OTUD7BQ6GQQ9 843 aa24.51■■□□□ 1.51
HMGXB4-203ENST00000420166 NBPF3Q9H094 633 aa24.51■■□□□ 1.51
HMGXB4-203ENST00000420166 SAGE1Q9NXZ1 904 aa24.51■■□□□ 1.51
HMGXB4-203ENST00000420166 TACC3Q9Y6A5 838 aa24.51■■□□□ 1.51
HMGXB4-203ENST00000420166 BTBD19C9JJ37 291 aa24.5■■□□□ 1.51
HMGXB4-203ENST00000420166 ALDH1A1P00352 501 aa24.5■■□□□ 1.51
HMGXB4-203ENST00000420166 MTMR2Q13614 643 aa24.5■■□□□ 1.51
HMGXB4-203ENST00000420166 FASTKD5Q7L8L6 764 aaKnown RBP24.5■■□□□ 1.51
HMGXB4-203ENST00000420166 ZNF444Q8N0Y2 327 aaPredicted RBP24.5■■□□□ 1.51
HMGXB4-203ENST00000420166 USP17L10C9JJH3 530 aa24.49■■□□□ 1.51
HMGXB4-203ENST00000420166 ZNF213O14771 459 aa24.49■■□□□ 1.51
HMGXB4-203ENST00000420166 FOXN1O15353 648 aa24.49■■□□□ 1.51
HMGXB4-203ENST00000420166 ORC4O43929 436 aa24.49■■□□□ 1.51
HMGXB4-203ENST00000420166 TRPA1O75762 1119 aa24.49■■□□□ 1.51
HMGXB4-203ENST00000420166 FGRP09769 529 aa24.49■■□□□ 1.51
HMGXB4-203ENST00000420166 HMGCS2P54868 508 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms