RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 GINM1Q9NU53 330 aa15.34■□□□□ 0.05
HMGN1P4-201ENST00000419500 GLRX3O76003 335 aaKnown RBP15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 LRRFIP1Q32MZ4 808 aaKnown RBP15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 SLFNL1Q499Z3 407 aa15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 GPAT2Q6NUI2 795 aa15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 PROCA1Q8NCQ7 364 aaPredicted RBP15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 DCP1AQ9NPI6 582 aaPredicted RBP15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 ATP8A2Q9NTI2 1148 aa15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 CPA4Q9UI42 421 aa15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 PNMA3Q9UL41 463 aa15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 ZBTB21Q9ULJ3 1066 aa15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 AGTPBP1Q9UPW5 1226 aa15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 SLC45A1Q9Y2W3 748 aa15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 SUPT16HQ9Y5B9 1047 aaKnown RBP15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 LOC285556D6RIA3 1793 aa15.33■□□□□ 0.04
HMGN1P4-201ENST00000419500 ZFYP08048 801 aaPredicted RBP15.32■□□□□ 0.04
HMGN1P4-201ENST00000419500 CYP2C8P10632 490 aa15.32■□□□□ 0.04
HMGN1P4-201ENST00000419500 PLCD1P51178 756 aa15.32■□□□□ 0.04
HMGN1P4-201ENST00000419500 HMGCS2P54868 508 aa15.32■□□□□ 0.04
HMGN1P4-201ENST00000419500 MTMR2Q13614 643 aa15.32■□□□□ 0.04
HMGN1P4-201ENST00000419500 TATDN1Q6P1N9 297 aa15.32■□□□□ 0.04
HMGN1P4-201ENST00000419500 OTUD7AQ8TE49 926 aaPredicted RBP15.32■□□□□ 0.04
HMGN1P4-201ENST00000419500 SMCR8Q8TEV9 937 aaPredicted RBP15.32■□□□□ 0.04
HMGN1P4-201ENST00000419500 RWDD1Q9H446 243 aaPredicted RBP15.32■□□□□ 0.04
HMGN1P4-201ENST00000419500 CENPFP49454 3210 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 PRKAB2O43741 272 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 GH2P01242 217 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 CHGBP05060 677 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 LACTBP83111 547 aaPredicted RBP15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 PABPC4Q13310 644 aaKnown RBP eCLIP15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 C17orf99Q6UX52 265 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 EXOC6Q8TAG9 804 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 PI4K2BQ8TCG2 481 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 WDR18Q9BV38 432 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 PUS7LQ9H0K6 701 aaKnown RBP15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 TMOD4Q9NZQ9 345 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 SLC4A4Q9Y6R1 1079 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 ADGRA2Q96PE1 1338 aa15.31■□□□□ 0.04
HMGN1P4-201ENST00000419500 JAG1P78504 1218 aa15.3■□□□□ 0.04
HMGN1P4-201ENST00000419500 ABCB5Q2M3G0 1257 aa15.3■□□□□ 0.04
HMGN1P4-201ENST00000419500 SHROOM1Q2M3G4 852 aaPredicted RBP15.3■□□□□ 0.04
HMGN1P4-201ENST00000419500 TREML2Q5T2D2 321 aa15.3■□□□□ 0.04
HMGN1P4-201ENST00000419500 APPBP2Q92624 585 aa15.3■□□□□ 0.04
HMGN1P4-201ENST00000419500 FEZ1Q99689 392 aa15.3■□□□□ 0.04
HMGN1P4-201ENST00000419500 FSD1Q9BTV5 496 aa15.3■□□□□ 0.04
HMGN1P4-201ENST00000419500 CABP5Q9NP86 173 aa15.3■□□□□ 0.04
HMGN1P4-201ENST00000419500 PTPN22Q9Y2R2 807 aa15.3■□□□□ 0.04
HMGN1P4-201ENST00000419500 USP17L10C9JJH3 530 aa15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 MPHOSPH10O00566 681 aaKnown RBP15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 RNF113AO15541 343 aaKnown RBP15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 ECM2O94769 699 aaPredicted RBP15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 GNRH1P01148 92 aa15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 SHMT1P34896 483 aa15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 BACE1P56817 501 aa15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 RAB3GAP1Q15042 981 aa15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 SH3D19Q5HYK7 790 aa15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 SWAP70Q9UH65 585 aa15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 ZSWIM8A7E2V4 1837 aa15.29■□□□□ 0.04
HMGN1P4-201ENST00000419500 SALL3Q9BXA9 1300 aa15.28■□□□□ 0.04
HMGN1P4-201ENST00000419500 C19orf81C9J6K1 198 aa15.28■□□□□ 0.04
HMGN1P4-201ENST00000419500 FMNL1O95466 1100 aaPredicted RBP15.28■□□□□ 0.04
HMGN1P4-201ENST00000419500 CYP2D6P10635 497 aa15.28■□□□□ 0.04
HMGN1P4-201ENST00000419500 OSBPP22059 807 aa15.28■□□□□ 0.04
HMGN1P4-201ENST00000419500 SOX10P56693 466 aa15.28■□□□□ 0.04
HMGN1P4-201ENST00000419500 ARHGAP39Q9C0H5 1083 aa15.28■□□□□ 0.04
HMGN1P4-201ENST00000419500 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
HMGN1P4-201ENST00000419500 BAZ2AQ9UIF9 1905 aaKnown RBP15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 BCRP11274 1271 aa15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 PSMC4P43686 418 aa15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 IRX3P78415 501 aaPredicted RBP15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 CAP1Q01518 475 aa15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 EVX2Q03828 476 aa15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 GABPAQ06546 454 aa15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 ZYXQ15942 572 aaKnown RBP15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 B4GALNT3Q6L9W6 998 aa15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 SAMD1Q6SPF0 538 aaPredicted RBP15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 OSBP2Q969R2 916 aa15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 STRBPQ96SI9 672 aaKnown RBP15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 LNPKQ9C0E8 428 aa15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 ARPP21Q9UBL0 812 aaPredicted RBP15.27■□□□□ 0.04
HMGN1P4-201ENST00000419500 MYH8P13535 1937 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 USP17L12C9JPN9 530 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 USP17L21D6R901 530 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 GPAA1O43292 621 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 GNAT2P19087 354 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 PDE1AP54750 535 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 PRMT2P55345 433 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 FCGRTP55899 365 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 SLC9C1Q4G0N8 1177 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 C12orf60Q5U649 245 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 USP17L2Q6R6M4 530 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 SMC5Q8IY18 1101 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 ANKRD13CQ8N6S4 541 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 SLC44A5Q8NCS7 719 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 DYNLL2Q96FJ2 89 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 TRIM47Q96LD4 638 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 ASCC2Q9H1I8 757 aaPredicted RBP15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 PTCH2Q9Y6C5 1203 aa15.26■□□□□ 0.03
HMGN1P4-201ENST00000419500 CYP2D7A0A087X1C5 515 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms