RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 MAP3K21Q5TCX8 1036 aa17.5■□□□□ 0.39
TTC38-202ENST00000417709 PAGR1Q9BTK6 254 aa17.5■□□□□ 0.39
TTC38-202ENST00000417709 SNRKQ9NRH2 765 aa17.5■□□□□ 0.39
TTC38-202ENST00000417709 PFASO15067 1338 aa17.49■□□□□ 0.39
TTC38-202ENST00000417709 LOC285556D6RIA3 1793 aa17.49■□□□□ 0.39
TTC38-202ENST00000417709 ZNF316A6NFI3 1004 aaPredicted RBP17.49■□□□□ 0.39
TTC38-202ENST00000417709 ASNSP08243 561 aa17.49■□□□□ 0.39
TTC38-202ENST00000417709 PDE3AQ14432 1141 aa17.49■□□□□ 0.39
TTC38-202ENST00000417709 MAPKAPK5Q8IW41 473 aa17.49■□□□□ 0.39
TTC38-202ENST00000417709 TGFBRAP1Q8WUH2 860 aa17.49■□□□□ 0.39
TTC38-202ENST00000417709 TRIM34Q9BYJ4 488 aa17.49■□□□□ 0.39
TTC38-202ENST00000417709 AATFQ9NY61 560 aaKnown RBP eCLIP17.49■□□□□ 0.39
TTC38-202ENST00000417709 PRUNE2Q8WUY3 3088 aa17.49■□□□□ 0.39
TTC38-202ENST00000417709 C19orf81C9J6K1 198 aa17.48■□□□□ 0.39
TTC38-202ENST00000417709 USP17L10C9JJH3 530 aa17.48■□□□□ 0.39
TTC38-202ENST00000417709 GDF11O95390 407 aa17.48■□□□□ 0.39
TTC38-202ENST00000417709 ZKSCAN1P17029 563 aaPredicted RBP17.48■□□□□ 0.39
TTC38-202ENST00000417709 MAPK4P31152 587 aa17.48■□□□□ 0.39
TTC38-202ENST00000417709 MCAMP43121 646 aa17.48■□□□□ 0.39
TTC38-202ENST00000417709 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
TTC38-202ENST00000417709 LRRC26Q2I0M4 334 aa17.48■□□□□ 0.39
TTC38-202ENST00000417709 LHX8Q68G74 356 aa17.48■□□□□ 0.39
TTC38-202ENST00000417709 FOXP4Q8IVH2 680 aaPredicted RBP17.48■□□□□ 0.39
TTC38-202ENST00000417709 TRMT44Q8IYL2 757 aaKnown RBP17.48■□□□□ 0.39
TTC38-202ENST00000417709 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
TTC38-202ENST00000417709 PORCNQ9H237 461 aa17.48■□□□□ 0.39
TTC38-202ENST00000417709 DHX36Q9H2U1 1008 aaKnown RBP17.48■□□□□ 0.39
TTC38-202ENST00000417709 CWC22Q9HCG8 908 aaKnown RBP17.48■□□□□ 0.39
TTC38-202ENST00000417709 PALD1Q9ULE6 856 aa17.48■□□□□ 0.39
TTC38-202ENST00000417709 VCANP13611 3396 aa17.48■□□□□ 0.39
TTC38-202ENST00000417709 BAG3O95817 575 aa17.47■□□□□ 0.39
TTC38-202ENST00000417709 GNAI3P08754 354 aa17.47■□□□□ 0.39
TTC38-202ENST00000417709 COL6A1P12109 1028 aa17.47■□□□□ 0.39
TTC38-202ENST00000417709 ERVK-9P63128 1117 aa17.47■□□□□ 0.39
TTC38-202ENST00000417709 ERVK-24P63145 666 aa17.47■□□□□ 0.39
TTC38-202ENST00000417709 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
TTC38-202ENST00000417709 PLEKHH3Q7Z736 793 aa17.47■□□□□ 0.39
TTC38-202ENST00000417709 USP6NLQ92738 828 aa17.47■□□□□ 0.39
TTC38-202ENST00000417709 SAP30BPQ9UHR5 308 aaKnown RBP17.47■□□□□ 0.39
TTC38-202ENST00000417709 NDUFB9Q9Y6M9 179 aa17.47■□□□□ 0.39
TTC38-202ENST00000417709 EYSQ5T1H1 3165 aa17.46■□□□□ 0.39
TTC38-202ENST00000417709 UQCRFS1P1P0C7P4 283 aa17.46■□□□□ 0.39
TTC38-202ENST00000417709 ARID4AP29374 1257 aaPredicted RBP17.46■□□□□ 0.39
TTC38-202ENST00000417709 RGS2P41220 211 aa17.46■□□□□ 0.39
TTC38-202ENST00000417709 GPR142Q7Z601 462 aa17.46■□□□□ 0.39
TTC38-202ENST00000417709 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
TTC38-202ENST00000417709 SOCS4Q8WXH5 440 aa17.46■□□□□ 0.39
TTC38-202ENST00000417709 SENP6Q9GZR1 1112 aaPredicted RBP17.46■□□□□ 0.39
TTC38-202ENST00000417709 EMILIN3Q9NT22 766 aa17.46■□□□□ 0.39
TTC38-202ENST00000417709 MORN1Q5T089 497 aa17.45■□□□□ 0.38
TTC38-202ENST00000417709 POTEEQ6S8J3 1075 aa17.45■□□□□ 0.38
TTC38-202ENST00000417709 EDC3Q96F86 508 aaKnown RBP17.45■□□□□ 0.38
TTC38-202ENST00000417709 FAM161BQ96MY7 647 aa17.45■□□□□ 0.38
TTC38-202ENST00000417709 COL2A1P02458 1487 aaPredicted RBP17.44■□□□□ 0.38
TTC38-202ENST00000417709 PLCG2P16885 1265 aa17.44■□□□□ 0.38
TTC38-202ENST00000417709 CNGA1P29973 690 aa17.44■□□□□ 0.38
TTC38-202ENST00000417709 PPP4CP60510 307 aa17.44■□□□□ 0.38
TTC38-202ENST00000417709 WDR78Q5VTH9 848 aa17.44■□□□□ 0.38
TTC38-202ENST00000417709 LBHD1Q9BQE6 289 aaPredicted RBP17.44■□□□□ 0.38
TTC38-202ENST00000417709 DNAJC18Q9H819 358 aa17.44■□□□□ 0.38
TTC38-202ENST00000417709 ZBTB21Q9ULJ3 1066 aa17.44■□□□□ 0.38
TTC38-202ENST00000417709 ATN1P54259 1190 aaPredicted RBP17.43■□□□□ 0.38
TTC38-202ENST00000417709 MTX1Q13505 466 aa17.43■□□□□ 0.38
TTC38-202ENST00000417709 ZYXQ15942 572 aaKnown RBP17.43■□□□□ 0.38
TTC38-202ENST00000417709 TTC39AQ5SRH9 613 aa17.43■□□□□ 0.38
TTC38-202ENST00000417709 USP17L2Q6R6M4 530 aa17.43■□□□□ 0.38
TTC38-202ENST00000417709 ADGRA1Q86SQ6 560 aa17.43■□□□□ 0.38
TTC38-202ENST00000417709 COL25A1Q9BXS0 654 aaPredicted RBP17.43■□□□□ 0.38
TTC38-202ENST00000417709 TTC28Q96AY4 2481 aa17.42■□□□□ 0.38
TTC38-202ENST00000417709 MYO5AQ9Y4I1 1855 aaKnown RBP17.42■□□□□ 0.38
TTC38-202ENST00000417709 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
TTC38-202ENST00000417709 POTEB2H3BUK9 544 aa17.42■□□□□ 0.38
TTC38-202ENST00000417709 GLRX3O76003 335 aaKnown RBP17.42■□□□□ 0.38
TTC38-202ENST00000417709 GNAI2P04899 355 aa17.42■□□□□ 0.38
TTC38-202ENST00000417709 DYNLL1P63167 89 aaKnown RBP17.42■□□□□ 0.38
TTC38-202ENST00000417709 MAP2K5Q13163 448 aa17.42■□□□□ 0.38
TTC38-202ENST00000417709 MFSD14CQ5VZR4 134 aa17.42■□□□□ 0.38
TTC38-202ENST00000417709 METTL16Q86W50 562 aaKnown RBP17.42■□□□□ 0.38
TTC38-202ENST00000417709 FLRT1Q9NZU1 646 aa17.42■□□□□ 0.38
TTC38-202ENST00000417709 FLT1P17948 1338 aa17.42■□□□□ 0.38
TTC38-202ENST00000417709 USP17L15C9J2P7 530 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 USP17L13C9JLJ4 530 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 USP17L11C9JVI0 530 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 USP17L18D6R9N7 530 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 USP17L22D6RA61 530 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 USP17L17D6RBQ6 530 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 USP17L19D6RCP7 530 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 USP17L20D6RJB6 530 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 GH2P01242 217 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 CYP2E1P05181 493 aaPredicted RBP17.41■□□□□ 0.38
TTC38-202ENST00000417709 CT47B1P0C2W7 299 aaPredicted RBP17.41■□□□□ 0.38
TTC38-202ENST00000417709 RARSP54136 660 aaKnown RBP17.41■□□□□ 0.38
TTC38-202ENST00000417709 ATP2B2Q01814 1243 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 USP17L24Q0WX57 530 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 CCDC158Q5M9N0 1113 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 APBA2Q99767 749 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 GINM1Q9NU53 330 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 RABGAP1Q9Y3P9 1069 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 SIPA1L1O43166 1804 aa17.41■□□□□ 0.38
TTC38-202ENST00000417709 CDK5RAP2Q96SN8 1893 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms