RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 G3BP1Q13283 466 aaKnown RBP eCLIP20.08■□□□□ 0.81
PRPF18-203ENST00000417658 TXNRD2Q9NNW7 524 aa20.08■□□□□ 0.81
PRPF18-203ENST00000417658 PLXNB2O15031 1838 aa20.08■□□□□ 0.8
PRPF18-203ENST00000417658 USP17L10C9JJH3 530 aa20.07■□□□□ 0.8
PRPF18-203ENST00000417658 PRKAR2AP13861 404 aaKnown RBP20.07■□□□□ 0.8
PRPF18-203ENST00000417658 MAGEA10P43363 369 aaPredicted RBP20.07■□□□□ 0.8
PRPF18-203ENST00000417658 NAA16Q6N069 864 aaPredicted RBP20.07■□□□□ 0.8
PRPF18-203ENST00000417658 TDHQ8IZJ6 230 aa20.07■□□□□ 0.8
PRPF18-203ENST00000417658 GTF3C2Q8WUA4 911 aaPredicted RBP20.07■□□□□ 0.8
PRPF18-203ENST00000417658 RBPJLQ9UBG7 517 aa20.07■□□□□ 0.8
PRPF18-203ENST00000417658 GNAI2P04899 355 aa20.06■□□□□ 0.8
PRPF18-203ENST00000417658 SYN1P17600 705 aa20.06■□□□□ 0.8
PRPF18-203ENST00000417658 JAG1P78504 1218 aa20.06■□□□□ 0.8
PRPF18-203ENST00000417658 PDE3AQ14432 1141 aa20.06■□□□□ 0.8
PRPF18-203ENST00000417658 DEFB123Q8N688 67 aa20.06■□□□□ 0.8
PRPF18-203ENST00000417658 TGFBRAP1Q8WUH2 860 aa20.06■□□□□ 0.8
PRPF18-203ENST00000417658 USP6NLQ92738 828 aa20.06■□□□□ 0.8
PRPF18-203ENST00000417658 AATFQ9NY61 560 aaKnown RBP eCLIP20.06■□□□□ 0.8
PRPF18-203ENST00000417658 IPO8O15397 1037 aaKnown RBP20.05■□□□□ 0.8
PRPF18-203ENST00000417658 COL6A1P12109 1028 aa20.05■□□□□ 0.8
PRPF18-203ENST00000417658 CRACR2BQ8N4Y2 399 aaPredicted RBP20.05■□□□□ 0.8
PRPF18-203ENST00000417658 TRIM34Q9BYJ4 488 aa20.05■□□□□ 0.8
PRPF18-203ENST00000417658 DNAJC18Q9H819 358 aa20.05■□□□□ 0.8
PRPF18-203ENST00000417658 GPR108Q9NPR9 543 aa20.05■□□□□ 0.8
PRPF18-203ENST00000417658 DDX60LQ5H9U9 1706 aaKnown RBP20.05■□□□□ 0.8
PRPF18-203ENST00000417658 PFASO15067 1338 aa20.04■□□□□ 0.8
PRPF18-203ENST00000417658 PNMA6EA0A0J9YXQ4 647 aa20.04■□□□□ 0.8
PRPF18-203ENST00000417658 ZKSCAN1P17029 563 aaPredicted RBP20.04■□□□□ 0.8
PRPF18-203ENST00000417658 RGS2P41220 211 aa20.04■□□□□ 0.8
PRPF18-203ENST00000417658 ERVK-9P63128 1117 aa20.04■□□□□ 0.8
PRPF18-203ENST00000417658 ERVK-24P63145 666 aa20.04■□□□□ 0.8
PRPF18-203ENST00000417658 CACNB2Q08289 660 aaPredicted RBP20.04■□□□□ 0.8
PRPF18-203ENST00000417658 Q3C1V9 767 aa20.04■□□□□ 0.8
PRPF18-203ENST00000417658 MAPKAPK5Q8IW41 473 aa20.04■□□□□ 0.8
PRPF18-203ENST00000417658 CCAR1Q8IX12 1150 aaKnown RBP20.04■□□□□ 0.8
PRPF18-203ENST00000417658 PALD1Q9ULE6 856 aa20.04■□□□□ 0.8
PRPF18-203ENST00000417658 FLT1P17948 1338 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 CUL9Q8IWT3 2517 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 CCDC158Q5M9N0 1113 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 MORN1Q5T089 497 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 LHX8Q68G74 356 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 ATF7IPQ6VMQ6 1270 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 GPR142Q7Z601 462 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 ZNF512BQ96KM6 892 aaPredicted RBP20.03■□□□□ 0.8
PRPF18-203ENST00000417658 UBE2OQ9C0C9 1292 aaKnown RBP20.03■□□□□ 0.8
PRPF18-203ENST00000417658 SNRKQ9NRH2 765 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 EMILIN3Q9NT22 766 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 ZBTB21Q9ULJ3 1066 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 STXBP5LQ9Y2K9 1186 aa20.03■□□□□ 0.8
PRPF18-203ENST00000417658 SIPA1L1O43166 1804 aa20.02■□□□□ 0.8
PRPF18-203ENST00000417658 PEX10O60683 326 aa20.02■□□□□ 0.8
PRPF18-203ENST00000417658 TTC39AQ5SRH9 613 aa20.02■□□□□ 0.8
PRPF18-203ENST00000417658 USP17L2Q6R6M4 530 aa20.02■□□□□ 0.8
PRPF18-203ENST00000417658 PLEKHH3Q7Z736 793 aa20.02■□□□□ 0.8
PRPF18-203ENST00000417658 PORCNQ9H237 461 aa20.02■□□□□ 0.8
PRPF18-203ENST00000417658 MTMR10Q9NXD2 777 aa20.02■□□□□ 0.8
PRPF18-203ENST00000417658 CYP2E1P05181 493 aaPredicted RBP20.01■□□□□ 0.79
PRPF18-203ENST00000417658 HLA-DOAP06340 250 aa20.01■□□□□ 0.79
PRPF18-203ENST00000417658 TRIM27P14373 513 aa20.01■□□□□ 0.79
PRPF18-203ENST00000417658 POTEEQ6S8J3 1075 aa20.01■□□□□ 0.79
PRPF18-203ENST00000417658 ADGRA1Q86SQ6 560 aa20.01■□□□□ 0.79
PRPF18-203ENST00000417658 APBA2Q99767 749 aa20.01■□□□□ 0.79
PRPF18-203ENST00000417658 GDF11O95390 407 aa20■□□□□ 0.79
PRPF18-203ENST00000417658 CCND3P30281 292 aaPredicted RBP20■□□□□ 0.79
PRPF18-203ENST00000417658 CCL14Q16627 93 aa20■□□□□ 0.79
PRPF18-203ENST00000417658 SHROOM1Q2M3G4 852 aaPredicted RBP20■□□□□ 0.79
PRPF18-203ENST00000417658 TNNI3KQ59H18 835 aa20■□□□□ 0.79
PRPF18-203ENST00000417658 Q7L0L9 218 aa20■□□□□ 0.79
PRPF18-203ENST00000417658 C12orf42Q96LP6 360 aa20■□□□□ 0.79
PRPF18-203ENST00000417658 RABGAP1Q9Y3P9 1069 aa20■□□□□ 0.79
PRPF18-203ENST00000417658 FPGT-TNNI3KV9GXZ4 949 aa20■□□□□ 0.79
PRPF18-203ENST00000417658 GLRX3O76003 335 aaKnown RBP19.99■□□□□ 0.79
PRPF18-203ENST00000417658 CCNA1P78396 465 aa19.99■□□□□ 0.79
PRPF18-203ENST00000417658 MAP2K5Q13163 448 aa19.99■□□□□ 0.79
PRPF18-203ENST00000417658 CERS3Q8IU89 383 aa19.99■□□□□ 0.79
PRPF18-203ENST00000417658 EDC3Q96F86 508 aaKnown RBP19.99■□□□□ 0.79
PRPF18-203ENST00000417658 PAGR1Q9BTK6 254 aa19.99■□□□□ 0.79
PRPF18-203ENST00000417658 USP17L15C9J2P7 530 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 USP17L13C9JLJ4 530 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 USP17L11C9JVI0 530 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 USP17L18D6R9N7 530 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 USP17L22D6RA61 530 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 USP17L17D6RBQ6 530 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 USP17L19D6RCP7 530 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 USP17L20D6RJB6 530 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 USP17L24Q0WX57 530 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 POLA2Q14181 598 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 LRRC26Q2I0M4 334 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 TATDN1Q6P1N9 297 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 DBNDD2Q9BQY9 259 aa19.98■□□□□ 0.79
PRPF18-203ENST00000417658 FOCADQ5VW36 1801 aa19.97■□□□□ 0.79
PRPF18-203ENST00000417658 CDK5RAP2Q96SN8 1893 aa19.97■□□□□ 0.79
PRPF18-203ENST00000417658 GH2P01242 217 aa19.97■□□□□ 0.79
PRPF18-203ENST00000417658 MFSD14CQ5VZR4 134 aa19.97■□□□□ 0.79
PRPF18-203ENST00000417658 SSH3Q8TE77 659 aa19.97■□□□□ 0.79
PRPF18-203ENST00000417658 CWC22Q9HCG8 908 aaKnown RBP19.97■□□□□ 0.79
PRPF18-203ENST00000417658 SAP30BPQ9UHR5 308 aaKnown RBP19.97■□□□□ 0.79
PRPF18-203ENST00000417658 MAST2Q6P0Q8 1798 aa19.96■□□□□ 0.79
PRPF18-203ENST00000417658 SLC15A5A6NIM6 579 aa19.96■□□□□ 0.79
PRPF18-203ENST00000417658 ZAP70P43403 619 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms