RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 TBC1D8O95759 1140 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 CYP2D6P10635 497 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 SDSP20132 328 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 PDE4AP27815 886 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 MAP3K10Q02779 954 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 SPP2Q13103 211 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 NMIQ13287 307 aaPredicted RBP8.22□□□□□ -1.09
NCL-203ENST00000417652 RAB3GAP1Q15042 981 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 ABCB5Q2M3G0 1257 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 TTC22Q5TAA0 569 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 ERICH6BQ5W0A0 696 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 GIMAP6Q6P9H5 292 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 CWC27Q6UX04 472 aaKnown RBP8.22□□□□□ -1.09
NCL-203ENST00000417652 FASTKD5Q7L8L6 764 aaKnown RBP8.22□□□□□ -1.09
NCL-203ENST00000417652 IFNL1Q8IU54 200 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 RUFY2Q8WXA3 655 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 FEZ1Q99689 392 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 TBC1D2Q9BYX2 928 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 EHD4Q9H223 541 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 ARPP21Q9UBL0 812 aaPredicted RBP8.22□□□□□ -1.09
NCL-203ENST00000417652 SWAP70Q9UH65 585 aa8.22□□□□□ -1.09
NCL-203ENST00000417652 CYP2D7A0A087X1C5 515 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 GSG1L2A8MUP6 293 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 GH2P01242 217 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 GJA5P36382 358 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 ATP2B2Q01814 1243 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 TAF1CQ15572 869 aaPredicted RBP8.21□□□□□ -1.1
NCL-203ENST00000417652 C12orf60Q5U649 245 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 CTR9Q6PD62 1173 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 CCDC129Q6ZRS4 1044 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 IFNL3Q8IZI9 196 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 ZNF444Q8N0Y2 327 aaPredicted RBP8.21□□□□□ -1.1
NCL-203ENST00000417652 ZNF280CQ8ND82 737 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 DYNLL2Q96FJ2 89 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 FAM227BQ96M60 508 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 ZFYVE28Q9HCC9 887 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 TOMM22Q9NS69 142 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 GINM1Q9NU53 330 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 SAGE1Q9NXZ1 904 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 TMOD4Q9NZQ9 345 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 CDK5RAP2Q96SN8 1893 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 BAZ2AQ9UIF9 1905 aaKnown RBP8.21□□□□□ -1.1
NCL-203ENST00000417652 PCNTO95613 3336 aa8.21□□□□□ -1.1
NCL-203ENST00000417652 A0A0D9SFI3 127 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 RAD21O60216 631 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 HSPA8P11142 646 aaKnown RBP8.2□□□□□ -1.1
NCL-203ENST00000417652 CDK8P49336 464 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 PDE4BQ07343 736 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 PABPC4Q13310 644 aaKnown RBP eCLIP8.2□□□□□ -1.1
NCL-203ENST00000417652 TATDN1Q6P1N9 297 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 CASC1Q6TDU7 716 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 CCDC84Q86UT8 332 aaPredicted RBP8.2□□□□□ -1.1
NCL-203ENST00000417652 METTL16Q86W50 562 aaKnown RBP8.2□□□□□ -1.1
NCL-203ENST00000417652 BRI3BPQ8WY22 251 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 MS4A4AQ96JQ5 239 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 CCDC17Q96LX7 622 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.2□□□□□ -1.1
NCL-203ENST00000417652 TAOK2Q9UL54 1235 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 ZBTB21Q9ULJ3 1066 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 AFG3L2Q9Y4W6 797 aa8.2□□□□□ -1.1
NCL-203ENST00000417652 FOCADQ5VW36 1801 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 TESPA1A2RU30 521 aaPredicted RBP8.19□□□□□ -1.1
NCL-203ENST00000417652 C19orf81C9J6K1 198 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 BTBD19C9JJ37 291 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 USP17L10C9JJH3 530 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 PDHXO00330 501 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 IGF2BP3O00425 579 aaKnown RBP eCLIP8.19□□□□□ -1.1
NCL-203ENST00000417652 OSBPP22059 807 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 SHMT1P34896 483 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 HMGCS2P54868 508 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 RRP1BQ14684 758 aaKnown RBP8.19□□□□□ -1.1
NCL-203ENST00000417652 ARHGEF6Q15052 776 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 ZYXQ15942 572 aaKnown RBP8.19□□□□□ -1.1
NCL-203ENST00000417652 SBK1Q52WX2 424 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 KIAA1211Q6ZU35 1233 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 SLC44A5Q8NCS7 719 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 PTPN18Q99952 460 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 DNAJC18Q9H819 358 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 ARHGEF10LQ9HCE6 1279 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 PRDM10Q9NQV6 1147 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 KCNH4Q9UQ05 1017 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 CCDC171Q6TFL3 1326 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 NAV1Q8NEY1 1877 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 OTOFQ9HC10 1997 aa8.19□□□□□ -1.1
NCL-203ENST00000417652 A0A0G2JLL6 359 aaPredicted RBP8.18□□□□□ -1.1
NCL-203ENST00000417652 ZNF213O14771 459 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 FKTNO75072 461 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 TSPY3P0CV98 308 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 TSPY8P0CW00 308 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 HSPD1P10809 573 aaKnown RBP8.18□□□□□ -1.1
NCL-203ENST00000417652 GSPT1P15170 499 aaKnown RBP8.18□□□□□ -1.1
NCL-203ENST00000417652 USP14P54578 494 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 BACE1P56817 501 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 IRX3P78415 501 aaPredicted RBP8.18□□□□□ -1.1
NCL-203ENST00000417652 CTDSPL2Q05D32 466 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 PPARAQ07869 468 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 MTMR2Q13614 643 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 KIF22Q14807 665 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 SEPT2Q15019 361 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 RRP12Q5JTH9 1297 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms