RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 MBD4O95243 580 aa19.73■□□□□ 0.75
DDR1-231ENST00000417521 GDF11O95390 407 aa19.73■□□□□ 0.75
DDR1-231ENST00000417521 GNRH1P01148 92 aa19.73■□□□□ 0.75
DDR1-231ENST00000417521 TSHZ3Q63HK5 1081 aa19.73■□□□□ 0.75
DDR1-231ENST00000417521 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
DDR1-231ENST00000417521 TAOK2Q9UL54 1235 aa19.73■□□□□ 0.75
DDR1-231ENST00000417521 BCRP11274 1271 aa19.73■□□□□ 0.75
DDR1-231ENST00000417521 HMGCS2P54868 508 aa19.73■□□□□ 0.75
DDR1-231ENST00000417521 BACE1P56817 501 aa19.73■□□□□ 0.75
DDR1-231ENST00000417521 GABPAQ06546 454 aa19.73■□□□□ 0.75
DDR1-231ENST00000417521 ANKRD45Q5TZF3 282 aa19.73■□□□□ 0.75
DDR1-231ENST00000417521 C19orf81C9J6K1 198 aa19.72■□□□□ 0.75
DDR1-231ENST00000417521 PRKAB2O43741 272 aa19.72■□□□□ 0.75
DDR1-231ENST00000417521 GLRX3O76003 335 aaKnown RBP19.72■□□□□ 0.75
DDR1-231ENST00000417521 CHGBP05060 677 aa19.72■□□□□ 0.75
DDR1-231ENST00000417521 PABPC4Q13310 644 aaKnown RBP eCLIP19.72■□□□□ 0.75
DDR1-231ENST00000417521 CERKLQ49MI3 558 aaPredicted RBP19.72■□□□□ 0.75
DDR1-231ENST00000417521 TREML2Q5T2D2 321 aa19.72■□□□□ 0.75
DDR1-231ENST00000417521 PI4K2BQ8TCG2 481 aa19.72■□□□□ 0.75
DDR1-231ENST00000417521 PUS7LQ9H0K6 701 aaKnown RBP19.72■□□□□ 0.75
DDR1-231ENST00000417521 PNMA3Q9UL41 463 aa19.72■□□□□ 0.75
DDR1-231ENST00000417521 USP17L10C9JJH3 530 aa19.71■□□□□ 0.75
DDR1-231ENST00000417521 GH2P01242 217 aa19.71■□□□□ 0.75
DDR1-231ENST00000417521 ZFYP08048 801 aaPredicted RBP19.71■□□□□ 0.75
DDR1-231ENST00000417521 LRRFIP1Q32MZ4 808 aaKnown RBP19.71■□□□□ 0.75
DDR1-231ENST00000417521 OTUD7AQ8TE49 926 aaPredicted RBP19.71■□□□□ 0.75
DDR1-231ENST00000417521 MYO5AQ9Y4I1 1855 aaKnown RBP19.7■□□□□ 0.74
DDR1-231ENST00000417521 MX1P20591 662 aa19.7■□□□□ 0.74
DDR1-231ENST00000417521 SHMT1P34896 483 aa19.7■□□□□ 0.74
DDR1-231ENST00000417521 PRMT2P55345 433 aa19.7■□□□□ 0.74
DDR1-231ENST00000417521 MTMR2Q13614 643 aa19.7■□□□□ 0.74
DDR1-231ENST00000417521 SHROOM1Q2M3G4 852 aaPredicted RBP19.7■□□□□ 0.74
DDR1-231ENST00000417521 SMC5Q8IY18 1101 aa19.7■□□□□ 0.74
DDR1-231ENST00000417521 SMCR8Q8TEV9 937 aaPredicted RBP19.7■□□□□ 0.74
DDR1-231ENST00000417521 DDRGK1Q96HY6 314 aa19.7■□□□□ 0.74
DDR1-231ENST00000417521 ARHGAP39Q9C0H5 1083 aa19.7■□□□□ 0.74
DDR1-231ENST00000417521 CABP5Q9NP86 173 aa19.7■□□□□ 0.74
DDR1-231ENST00000417521 TMOD4Q9NZQ9 345 aa19.7■□□□□ 0.74
DDR1-231ENST00000417521 RNF113AO15541 343 aaKnown RBP19.69■□□□□ 0.74
DDR1-231ENST00000417521 PSMC4P43686 418 aa19.69■□□□□ 0.74
DDR1-231ENST00000417521 ABCB5Q2M3G0 1257 aa19.69■□□□□ 0.74
DDR1-231ENST00000417521 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
DDR1-231ENST00000417521 APPBP2Q92624 585 aa19.69■□□□□ 0.74
DDR1-231ENST00000417521 SWAP70Q9UH65 585 aa19.69■□□□□ 0.74
DDR1-231ENST00000417521 SLC4A4Q9Y6R1 1079 aa19.69■□□□□ 0.74
DDR1-231ENST00000417521 SALL3Q9BXA9 1300 aa19.69■□□□□ 0.74
DDR1-231ENST00000417521 HOXD10P28358 340 aa19.68■□□□□ 0.74
DDR1-231ENST00000417521 AMOTL1Q8IY63 956 aa19.68■□□□□ 0.74
DDR1-231ENST00000417521 OSBP2Q969R2 916 aa19.68■□□□□ 0.74
DDR1-231ENST00000417521 STRBPQ96SI9 672 aaKnown RBP19.68■□□□□ 0.74
DDR1-231ENST00000417521 DOCK1Q14185 1865 aa19.68■□□□□ 0.74
DDR1-231ENST00000417521 CYP2D6P10635 497 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 OSBPP22059 807 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 CTGFP29279 349 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 HOXA7P31268 230 aaPredicted RBP19.67■□□□□ 0.74
DDR1-231ENST00000417521 SOX10P56693 466 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 C12orf60Q5U649 245 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 ARMC5Q96C12 935 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 TRIM47Q96LD4 638 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 STAP2Q9UGK3 403 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 PTCH2Q9Y6C5 1203 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 USP17L12C9JPN9 530 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 USP17L21D6R901 530 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 FMNL1O95466 1100 aaPredicted RBP19.67■□□□□ 0.74
DDR1-231ENST00000417521 GCLCP48506 637 aaPredicted RBP19.67■□□□□ 0.74
DDR1-231ENST00000417521 EVX2Q03828 476 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 RAB3GAP1Q15042 981 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 ERICH6BQ5W0A0 696 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 GIMAP6Q6P9H5 292 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 ASCC2Q9H1I8 757 aaPredicted RBP19.67■□□□□ 0.74
DDR1-231ENST00000417521 SRRDQ9UH36 339 aa19.67■□□□□ 0.74
DDR1-231ENST00000417521 SIPA1L1O43166 1804 aa19.66■□□□□ 0.74
DDR1-231ENST00000417521 FCGRTP55899 365 aa19.66■□□□□ 0.74
DDR1-231ENST00000417521 USP17L2Q6R6M4 530 aa19.66■□□□□ 0.74
DDR1-231ENST00000417521 CCDC136Q96JN2 1154 aa19.66■□□□□ 0.74
DDR1-231ENST00000417521 EMILIN3Q9NT22 766 aa19.66■□□□□ 0.74
DDR1-231ENST00000417521 USP14P54578 494 aa19.65■□□□□ 0.74
DDR1-231ENST00000417521 FAM110CQ1W6H9 321 aa19.65■□□□□ 0.74
DDR1-231ENST00000417521 CTR9Q6PD62 1173 aa19.65■□□□□ 0.74
DDR1-231ENST00000417521 NBPF11Q86T75 865 aa19.65■□□□□ 0.74
DDR1-231ENST00000417521 DYNLL2Q96FJ2 89 aa19.65■□□□□ 0.74
DDR1-231ENST00000417521 C12orf42Q96LP6 360 aa19.65■□□□□ 0.74
DDR1-231ENST00000417521 KIAA1683Q9H0B3 1180 aa19.65■□□□□ 0.74
DDR1-231ENST00000417521 FOCADQ5VW36 1801 aa19.64■□□□□ 0.74
DDR1-231ENST00000417521 GNAT2P19087 354 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 GUCY1A2P33402 732 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 PDE1AP54750 535 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 IRX3P78415 501 aaPredicted RBP19.64■□□□□ 0.73
DDR1-231ENST00000417521 SLC9C1Q4G0N8 1177 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 ANKRD13CQ8N6S4 541 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 SLC44A5Q8NCS7 719 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 CCDC17Q96LX7 622 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 FEZ1Q99689 392 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 FSD1Q9BTV5 496 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 LNPKQ9C0E8 428 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.73
DDR1-231ENST00000417521 ARPP21Q9UBL0 812 aaPredicted RBP19.64■□□□□ 0.73
DDR1-231ENST00000417521 HTTP42858 3142 aa19.63■□□□□ 0.73
DDR1-231ENST00000417521 CYP2D7A0A087X1C5 515 aa19.63■□□□□ 0.73
DDR1-231ENST00000417521 GSG1L2A8MUP6 293 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms