RNA–Protein interactions for RNA: ENST00000416553.1

AP002856.2-201, humanhuman

TSL 3 BASIC

Gene AP002856.2, Length 584 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-201ENST00000416553 POLR3DP05423 398 aaPredicted RBP16.35■□□□□ 0.21
AP002856.2-201ENST00000416553 LCORLQ8N3X6 602 aa16.35■□□□□ 0.21
AP002856.2-201ENST00000416553 SDR42E1Q8WUS8 393 aa16.35■□□□□ 0.21
AP002856.2-201ENST00000416553 ARMC5Q96C12 935 aa16.35■□□□□ 0.21
AP002856.2-201ENST00000416553 TRIM47Q96LD4 638 aa16.35■□□□□ 0.21
AP002856.2-201ENST00000416553 ARMT1Q9H993 441 aa16.35■□□□□ 0.21
AP002856.2-201ENST00000416553 ZBTB21Q9ULJ3 1066 aa16.35■□□□□ 0.21
AP002856.2-201ENST00000416553 TNRC18O15417 2968 aaPredicted RBP16.34■□□□□ 0.21
AP002856.2-201ENST00000416553 BACE1P56817 501 aa16.34■□□□□ 0.21
AP002856.2-201ENST00000416553 UBE3CQ15386 1083 aa16.34■□□□□ 0.21
AP002856.2-201ENST00000416553 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
AP002856.2-201ENST00000416553 MCM9Q9NXL9 1143 aa16.34■□□□□ 0.21
AP002856.2-201ENST00000416553 PRKAB2O43741 272 aa16.33■□□□□ 0.2
AP002856.2-201ENST00000416553 MBD4O95243 580 aa16.33■□□□□ 0.2
AP002856.2-201ENST00000416553 FMNL1O95466 1100 aaPredicted RBP16.33■□□□□ 0.2
AP002856.2-201ENST00000416553 GH2P01242 217 aa16.33■□□□□ 0.2
AP002856.2-201ENST00000416553 EVX2Q03828 476 aa16.33■□□□□ 0.2
AP002856.2-201ENST00000416553 MTMR2Q13614 643 aa16.33■□□□□ 0.2
AP002856.2-201ENST00000416553 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.2
AP002856.2-201ENST00000416553 SMCR8Q8TEV9 937 aaPredicted RBP16.33■□□□□ 0.2
AP002856.2-201ENST00000416553 GPATCH3Q96I76 525 aa16.33■□□□□ 0.2
AP002856.2-201ENST00000416553 C19orf81C9J6K1 198 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 USP17L10C9JJH3 530 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 HOXD10P28358 340 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 SHMT1P34896 483 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 PRMT2P55345 433 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 GABPAQ06546 454 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 CERKLQ49MI3 558 aaPredicted RBP16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 SLC9C1Q4G0N8 1177 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 PDE4DIPQ5VU43 2346 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 ZSCAN25Q6NSZ9 544 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 ASCC2Q9H1I8 757 aaPredicted RBP16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 SRRDQ9UH36 339 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 PNMA3Q9UL41 463 aa16.32■□□□□ 0.2
AP002856.2-201ENST00000416553 MYH7P12883 1935 aa16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 LOC285556D6RIA3 1793 aa16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 CYP2D6P10635 497 aa16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 OSBPP22059 807 aa16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 PABPC4Q13310 644 aaKnown RBP eCLIP16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 ANKRD13CQ8N6S4 541 aa16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 ZNF333Q96JL9 665 aa16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 PUS7LQ9H0K6 701 aaKnown RBP16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 ATP8A2Q9NTI2 1148 aa16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 TMOD4Q9NZQ9 345 aa16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 DOCK3Q8IZD9 2030 aa16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
AP002856.2-201ENST00000416553 POTEFA5A3E0 1075 aa16.3■□□□□ 0.2
AP002856.2-201ENST00000416553 HOXA7P31268 230 aaPredicted RBP16.3■□□□□ 0.2
AP002856.2-201ENST00000416553 FCGRTP55899 365 aa16.3■□□□□ 0.2
AP002856.2-201ENST00000416553 ABCB5Q2M3G0 1257 aa16.3■□□□□ 0.2
AP002856.2-201ENST00000416553 KBTBD3Q8NAB2 608 aa16.3■□□□□ 0.2
AP002856.2-201ENST00000416553 OTUD7AQ8TE49 926 aaPredicted RBP16.3■□□□□ 0.2
AP002856.2-201ENST00000416553 EMILIN3Q9NT22 766 aa16.3■□□□□ 0.2
AP002856.2-201ENST00000416553 MGAMO43451 1857 aa16.3■□□□□ 0.2
AP002856.2-201ENST00000416553 NAV1Q8NEY1 1877 aa16.3■□□□□ 0.2
AP002856.2-201ENST00000416553 BRCA2P51587 3418 aa16.3■□□□□ 0.2
AP002856.2-201ENST00000416553 GCLCP48506 637 aaPredicted RBP16.29■□□□□ 0.2
AP002856.2-201ENST00000416553 RAB3GAP1Q15042 981 aa16.29■□□□□ 0.2
AP002856.2-201ENST00000416553 SH3TC2Q8TF17 1288 aa16.29■□□□□ 0.2
AP002856.2-201ENST00000416553 CABP5Q9NP86 173 aa16.29■□□□□ 0.2
AP002856.2-201ENST00000416553 BAZ2AQ9UIF9 1905 aaKnown RBP16.29■□□□□ 0.2
AP002856.2-201ENST00000416553 TTC41PQ6P2S7 1318 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 MYPNQ86TC9 1320 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 GUCY1A2P33402 732 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 PRKCZQ05513 592 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 FAM110CQ1W6H9 321 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 PI4K2BQ8TCG2 481 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 RAET1EQ8TD07 263 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 DYNLL2Q96FJ2 89 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 P2RX7Q99572 595 aaKnown RBP16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 GABRQQ9UN88 632 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 SLC4A4Q9Y6R1 1079 aa16.28■□□□□ 0.2
AP002856.2-201ENST00000416553 MKI67P46013 3256 aaKnown RBP16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 CYP2D7A0A087X1C5 515 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 USP17L12C9JPN9 530 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 USP17L21D6R901 530 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 SMIM22K7EJ46 135 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 ERC2O15083 957 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 RNF113AO15541 343 aaKnown RBP16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 IRX3P78415 501 aaPredicted RBP16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 SEPT2Q15019 361 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 ANKRD45Q5TZF3 282 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 C12orf60Q5U649 245 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 SLC44A5Q8NCS7 719 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 ACER1Q8TDN7 264 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 OSBP2Q969R2 916 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 STRBPQ96SI9 672 aaKnown RBP16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 TMEM106CQ9BVX2 250 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 SWAP70Q9UH65 585 aa16.27■□□□□ 0.2
AP002856.2-201ENST00000416553 MPHOSPH10O00566 681 aaKnown RBP16.26■□□□□ 0.19
AP002856.2-201ENST00000416553 GLRX3O76003 335 aaKnown RBP16.26■□□□□ 0.19
AP002856.2-201ENST00000416553 MYCP01106 439 aaPredicted RBP16.26■□□□□ 0.19
AP002856.2-201ENST00000416553 EN2P19622 333 aaPredicted RBP16.26■□□□□ 0.19
AP002856.2-201ENST00000416553 AAMPQ13685 434 aa16.26■□□□□ 0.19
AP002856.2-201ENST00000416553 ZYXQ15942 572 aaKnown RBP16.26■□□□□ 0.19
AP002856.2-201ENST00000416553 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
AP002856.2-201ENST00000416553 GCC1Q96CN9 775 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms