RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ZBTB21Q9ULJ3 1066 aa18.38■□□□□ 0.53
UBXN4-203ENST00000416538 RAB11FIP3O75154 756 aa18.37■□□□□ 0.53
UBXN4-203ENST00000416538 IFIT2P09913 472 aaKnown RBP18.37■□□□□ 0.53
UBXN4-203ENST00000416538 PRKCZQ05513 592 aa18.37■□□□□ 0.53
UBXN4-203ENST00000416538 MTMR2Q13614 643 aa18.37■□□□□ 0.53
UBXN4-203ENST00000416538 SH3D19Q5HYK7 790 aa18.37■□□□□ 0.53
UBXN4-203ENST00000416538 GABRQQ9UN88 632 aa18.37■□□□□ 0.53
UBXN4-203ENST00000416538 MYPNQ86TC9 1320 aa18.37■□□□□ 0.53
UBXN4-203ENST00000416538 PARP14Q460N5 1801 aa18.37■□□□□ 0.53
UBXN4-203ENST00000416538 GNRH1P01148 92 aa18.36■□□□□ 0.53
UBXN4-203ENST00000416538 ARHGEF6Q15052 776 aa18.36■□□□□ 0.53
UBXN4-203ENST00000416538 MTFR1Q15390 333 aa18.36■□□□□ 0.53
UBXN4-203ENST00000416538 LCORLQ8N3X6 602 aa18.36■□□□□ 0.53
UBXN4-203ENST00000416538 CRACR2BQ8N4Y2 399 aaPredicted RBP18.36■□□□□ 0.53
UBXN4-203ENST00000416538 WDR18Q9BV38 432 aa18.36■□□□□ 0.53
UBXN4-203ENST00000416538 BOLA2Q9H3K6 86 aa18.36■□□□□ 0.53
UBXN4-203ENST00000416538 ZNF532Q9HCE3 1301 aa18.36■□□□□ 0.53
UBXN4-203ENST00000416538 RLFQ13129 1914 aa18.35■□□□□ 0.53
UBXN4-203ENST00000416538 PEX10O60683 326 aa18.35■□□□□ 0.53
UBXN4-203ENST00000416538 FMNL1O95466 1100 aaPredicted RBP18.35■□□□□ 0.53
UBXN4-203ENST00000416538 ASNSP08243 561 aa18.35■□□□□ 0.53
UBXN4-203ENST00000416538 USP5P45974 858 aa18.35■□□□□ 0.53
UBXN4-203ENST00000416538 PLCD1P51178 756 aa18.35■□□□□ 0.53
UBXN4-203ENST00000416538 SLC9C2Q5TAH2 1124 aa18.35■□□□□ 0.53
UBXN4-203ENST00000416538 FOXP4Q8IVH2 680 aaPredicted RBP18.35■□□□□ 0.53
UBXN4-203ENST00000416538 ANKRD13CQ8N6S4 541 aa18.35■□□□□ 0.53
UBXN4-203ENST00000416538 SMCR8Q8TEV9 937 aaPredicted RBP18.35■□□□□ 0.53
UBXN4-203ENST00000416538 HLA-DOAP06340 250 aa18.34■□□□□ 0.53
UBXN4-203ENST00000416538 PRMT2P55345 433 aa18.34■□□□□ 0.53
UBXN4-203ENST00000416538 BACE1P56817 501 aa18.34■□□□□ 0.53
UBXN4-203ENST00000416538 TTF1Q15361 905 aaPredicted RBP18.34■□□□□ 0.53
UBXN4-203ENST00000416538 TATDN1Q6P1N9 297 aa18.34■□□□□ 0.53
UBXN4-203ENST00000416538 SDR42E1Q8WUS8 393 aa18.34■□□□□ 0.53
UBXN4-203ENST00000416538 SHISA4Q96DD7 197 aa18.34■□□□□ 0.53
UBXN4-203ENST00000416538 TBC1D2Q9BYX2 928 aa18.34■□□□□ 0.53
UBXN4-203ENST00000416538 ASCC2Q9H1I8 757 aaPredicted RBP18.34■□□□□ 0.53
UBXN4-203ENST00000416538 EHD4Q9H223 541 aa18.34■□□□□ 0.53
UBXN4-203ENST00000416538 PAG1Q9NWQ8 432 aa18.34■□□□□ 0.53
UBXN4-203ENST00000416538 GREB1LQ9C091 1923 aaPredicted RBP18.33■□□□□ 0.53
UBXN4-203ENST00000416538 A0A0G2JMZ2 1700 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 MAGEB6P1A0A0J9YX57 407 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 SMIM22K7EJ46 135 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 GH2P01242 217 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 ATP5JP18859 108 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 SHMT1P34896 483 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 FCGRTP55899 365 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 POTEEQ6S8J3 1075 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 CERS3Q8IU89 383 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 HAUS7Q99871 368 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 CHMP4BQ9H444 224 aaKnown RBP18.33■□□□□ 0.52
UBXN4-203ENST00000416538 AS3MTQ9HBK9 375 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 SERPINB13Q9UIV8 391 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 ALPK3Q96L96 1907 aa18.33■□□□□ 0.52
UBXN4-203ENST00000416538 CYP2D6P10635 497 aa18.32■□□□□ 0.52
UBXN4-203ENST00000416538 GRK4P32298 578 aa18.32■□□□□ 0.52
UBXN4-203ENST00000416538 ADD2P35612 726 aa18.32■□□□□ 0.52
UBXN4-203ENST00000416538 GABPAQ06546 454 aa18.32■□□□□ 0.52
UBXN4-203ENST00000416538 FAM110CQ1W6H9 321 aa18.32■□□□□ 0.52
UBXN4-203ENST00000416538 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
UBXN4-203ENST00000416538 LRRCC1Q9C099 1032 aa18.32■□□□□ 0.52
UBXN4-203ENST00000416538 ARMT1Q9H993 441 aa18.32■□□□□ 0.52
UBXN4-203ENST00000416538 PRKAB2O43741 272 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 GUCY1A2P33402 732 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 FLT3LGP49771 235 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 PRPF38BQ5VTL8 546 aaKnown RBP18.31■□□□□ 0.52
UBXN4-203ENST00000416538 TSHZ3Q63HK5 1081 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 NBPF11Q86T75 865 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 SLC44A5Q8NCS7 719 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 RAET1EQ8TD07 263 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 EMILIN3Q9NT22 766 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 PNMA3Q9UL41 463 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 PCDHB15Q9Y5E8 787 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 CEP290O15078 2479 aa18.31■□□□□ 0.52
UBXN4-203ENST00000416538 MBD4O95243 580 aa18.3■□□□□ 0.52
UBXN4-203ENST00000416538 ELNP15502 786 aa18.3■□□□□ 0.52
UBXN4-203ENST00000416538 TMEM106CQ9BVX2 250 aa18.3■□□□□ 0.52
UBXN4-203ENST00000416538 CRNKL1Q9BZJ0 848 aaKnown RBP18.3■□□□□ 0.52
UBXN4-203ENST00000416538 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
UBXN4-203ENST00000416538 DCP1AQ9NPI6 582 aaPredicted RBP18.3■□□□□ 0.52
UBXN4-203ENST00000416538 GINM1Q9NU53 330 aa18.3■□□□□ 0.52
UBXN4-203ENST00000416538 FRMPD3Q5JV73 1810 aa18.3■□□□□ 0.52
UBXN4-203ENST00000416538 TNPO2O14787 897 aaKnown RBP18.29■□□□□ 0.52
UBXN4-203ENST00000416538 HOXD10P28358 340 aa18.29■□□□□ 0.52
UBXN4-203ENST00000416538 ACER1Q8TDN7 264 aa18.29■□□□□ 0.52
UBXN4-203ENST00000416538 DCTPP1Q9H773 170 aa18.29■□□□□ 0.52
UBXN4-203ENST00000416538 MCM9Q9NXL9 1143 aa18.29■□□□□ 0.52
UBXN4-203ENST00000416538 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
UBXN4-203ENST00000416538 USP17L10C9JJH3 530 aa18.28■□□□□ 0.52
UBXN4-203ENST00000416538 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
UBXN4-203ENST00000416538 RRP1P56182 461 aaKnown RBP18.28■□□□□ 0.52
UBXN4-203ENST00000416538 ZYXQ15942 572 aaKnown RBP18.28■□□□□ 0.52
UBXN4-203ENST00000416538 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
UBXN4-203ENST00000416538 P2RX7Q99572 595 aaKnown RBP18.28■□□□□ 0.52
UBXN4-203ENST00000416538 MORF4L1Q9UBU8 362 aa18.28■□□□□ 0.52
UBXN4-203ENST00000416538 CYP2D7A0A087X1C5 515 aa18.27■□□□□ 0.52
UBXN4-203ENST00000416538 C19orf81C9J6K1 198 aa18.27■□□□□ 0.52
UBXN4-203ENST00000416538 ADCY3O60266 1144 aa18.27■□□□□ 0.52
UBXN4-203ENST00000416538 CCL5P13501 91 aa18.27■□□□□ 0.52
UBXN4-203ENST00000416538 GCLCP48506 637 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms