RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TMOD4Q9NZQ9 345 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 DDX60LQ5H9U9 1706 aaKnown RBP18.93■□□□□ 0.62
DDX56-202ENST00000415758 CDK5RAP2Q96SN8 1893 aa18.92■□□□□ 0.62
DDX56-202ENST00000415758 USP17L10C9JJH3 530 aa18.92■□□□□ 0.62
DDX56-202ENST00000415758 CYP2B6P20813 491 aa18.92■□□□□ 0.62
DDX56-202ENST00000415758 HERVK_113P62684 666 aa18.92■□□□□ 0.62
DDX56-202ENST00000415758 NAA16Q6N069 864 aaPredicted RBP18.92■□□□□ 0.62
DDX56-202ENST00000415758 TRMT44Q8IYL2 757 aaKnown RBP18.92■□□□□ 0.62
DDX56-202ENST00000415758 USP6NLQ92738 828 aa18.92■□□□□ 0.62
DDX56-202ENST00000415758 AATFQ9NY61 560 aaKnown RBP eCLIP18.92■□□□□ 0.62
DDX56-202ENST00000415758 RBPJLQ9UBG7 517 aa18.92■□□□□ 0.62
DDX56-202ENST00000415758 FOCADQ5VW36 1801 aa18.92■□□□□ 0.62
DDX56-202ENST00000415758 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
DDX56-202ENST00000415758 MAPK4P31152 587 aa18.91■□□□□ 0.62
DDX56-202ENST00000415758 LRIT3Q3SXY7 679 aa18.91■□□□□ 0.62
DDX56-202ENST00000415758 TGFBRAP1Q8WUH2 860 aa18.91■□□□□ 0.62
DDX56-202ENST00000415758 ZMYND8Q9ULU4 1186 aaPredicted RBP18.91■□□□□ 0.62
DDX56-202ENST00000415758 FLT1P17948 1338 aa18.91■□□□□ 0.62
DDX56-202ENST00000415758 DLL1O00548 723 aa18.9■□□□□ 0.62
DDX56-202ENST00000415758 COL6A1P12109 1028 aa18.9■□□□□ 0.62
DDX56-202ENST00000415758 PRKAR2AP13861 404 aaKnown RBP18.9■□□□□ 0.62
DDX56-202ENST00000415758 TRIM27P14373 513 aa18.9■□□□□ 0.62
DDX56-202ENST00000415758 Q3C1V9 767 aa18.9■□□□□ 0.62
DDX56-202ENST00000415758 ADGRA1Q86SQ6 560 aa18.9■□□□□ 0.62
DDX56-202ENST00000415758 MAPKAPK5Q8IW41 473 aa18.9■□□□□ 0.62
DDX56-202ENST00000415758 GTF3C2Q8WUA4 911 aaPredicted RBP18.9■□□□□ 0.62
DDX56-202ENST00000415758 ZNF512BQ96KM6 892 aaPredicted RBP18.9■□□□□ 0.62
DDX56-202ENST00000415758 A0A0C4DFX4 3053 aa18.9■□□□□ 0.62
DDX56-202ENST00000415758 MAST2Q6P0Q8 1798 aa18.89■□□□□ 0.61
DDX56-202ENST00000415758 CYP2E1P05181 493 aaPredicted RBP18.89■□□□□ 0.61
DDX56-202ENST00000415758 ERVK-9P63128 1117 aa18.89■□□□□ 0.61
DDX56-202ENST00000415758 ERVK-24P63145 666 aa18.89■□□□□ 0.61
DDX56-202ENST00000415758 CACNB2Q08289 660 aaPredicted RBP18.89■□□□□ 0.61
DDX56-202ENST00000415758 CCDC158Q5M9N0 1113 aa18.89■□□□□ 0.61
DDX56-202ENST00000415758 POTEEQ6S8J3 1075 aa18.89■□□□□ 0.61
DDX56-202ENST00000415758 ATF7IPQ6VMQ6 1270 aa18.89■□□□□ 0.61
DDX56-202ENST00000415758 SNRKQ9NRH2 765 aa18.89■□□□□ 0.61
DDX56-202ENST00000415758 PALD1Q9ULE6 856 aa18.89■□□□□ 0.61
DDX56-202ENST00000415758 ZBTB21Q9ULJ3 1066 aa18.89■□□□□ 0.61
DDX56-202ENST00000415758 PFASO15067 1338 aa18.89■□□□□ 0.61
DDX56-202ENST00000415758 PEX10O60683 326 aa18.88■□□□□ 0.61
DDX56-202ENST00000415758 MAGEA10P43363 369 aaPredicted RBP18.88■□□□□ 0.61
DDX56-202ENST00000415758 TNNI3KQ59H18 835 aa18.88■□□□□ 0.61
DDX56-202ENST00000415758 TTC39AQ5SRH9 613 aa18.88■□□□□ 0.61
DDX56-202ENST00000415758 MORN1Q5T089 497 aa18.88■□□□□ 0.61
DDX56-202ENST00000415758 LHX8Q68G74 356 aa18.88■□□□□ 0.61
DDX56-202ENST00000415758 CRACR2BQ8N4Y2 399 aaPredicted RBP18.88■□□□□ 0.61
DDX56-202ENST00000415758 EMILIN3Q9NT22 766 aa18.88■□□□□ 0.61
DDX56-202ENST00000415758 FPGT-TNNI3KV9GXZ4 949 aa18.88■□□□□ 0.61
DDX56-202ENST00000415758 SYN1P17600 705 aa18.87■□□□□ 0.61
DDX56-202ENST00000415758 RGS2P41220 211 aa18.87■□□□□ 0.61
DDX56-202ENST00000415758 POLA2Q14181 598 aa18.87■□□□□ 0.61
DDX56-202ENST00000415758 PDE3AQ14432 1141 aa18.87■□□□□ 0.61
DDX56-202ENST00000415758 SHROOM1Q2M3G4 852 aaPredicted RBP18.87■□□□□ 0.61
DDX56-202ENST00000415758 GPR142Q7Z601 462 aa18.87■□□□□ 0.61
DDX56-202ENST00000415758 TDHQ8IZJ6 230 aa18.87■□□□□ 0.61
DDX56-202ENST00000415758 DBNDD2Q9BQY9 259 aa18.87■□□□□ 0.61
DDX56-202ENST00000415758 TRIM34Q9BYJ4 488 aa18.87■□□□□ 0.61
DDX56-202ENST00000415758 PORCNQ9H237 461 aa18.87■□□□□ 0.61
DDX56-202ENST00000415758 MYO5AQ9Y4I1 1855 aaKnown RBP18.87■□□□□ 0.61
DDX56-202ENST00000415758 GDF11O95390 407 aa18.86■□□□□ 0.61
DDX56-202ENST00000415758 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
DDX56-202ENST00000415758 TATDN1Q6P1N9 297 aa18.86■□□□□ 0.61
DDX56-202ENST00000415758 USP17L2Q6R6M4 530 aa18.86■□□□□ 0.61
DDX56-202ENST00000415758 PLEKHH3Q7Z736 793 aa18.86■□□□□ 0.61
DDX56-202ENST00000415758 DEFB123Q8N688 67 aa18.86■□□□□ 0.61
DDX56-202ENST00000415758 SSH3Q8TE77 659 aa18.86■□□□□ 0.61
DDX56-202ENST00000415758 C12orf42Q96LP6 360 aa18.86■□□□□ 0.61
DDX56-202ENST00000415758 HLA-DOAP06340 250 aa18.85■□□□□ 0.61
DDX56-202ENST00000415758 APBA2Q99767 749 aa18.85■□□□□ 0.61
DDX56-202ENST00000415758 TNNQ9UQP3 1299 aa18.85■□□□□ 0.61
DDX56-202ENST00000415758 RABGAP1Q9Y3P9 1069 aa18.85■□□□□ 0.61
DDX56-202ENST00000415758 BCAR3O75815 825 aa18.84■□□□□ 0.61
DDX56-202ENST00000415758 CCND3P30281 292 aaPredicted RBP18.84■□□□□ 0.61
DDX56-202ENST00000415758 ZAP70P43403 619 aa18.84■□□□□ 0.61
DDX56-202ENST00000415758 ATP8B2P98198 1209 aa18.84■□□□□ 0.61
DDX56-202ENST00000415758 CCL14Q16627 93 aa18.84■□□□□ 0.61
DDX56-202ENST00000415758 CERS3Q8IU89 383 aa18.84■□□□□ 0.61
DDX56-202ENST00000415758 CCAR1Q8IX12 1150 aaKnown RBP18.84■□□□□ 0.61
DDX56-202ENST00000415758 UBE2OQ9C0C9 1292 aaKnown RBP18.84■□□□□ 0.61
DDX56-202ENST00000415758 PIH1D3Q9NQM4 214 aaKnown RBP18.84■□□□□ 0.61
DDX56-202ENST00000415758 STXBP5LQ9Y2K9 1186 aa18.84■□□□□ 0.61
DDX56-202ENST00000415758 MYH1P12882 1939 aa18.83■□□□□ 0.6
DDX56-202ENST00000415758 MAP2K5Q13163 448 aa18.83■□□□□ 0.6
DDX56-202ENST00000415758 CLUAP1Q96AJ1 413 aa18.83■□□□□ 0.6
DDX56-202ENST00000415758 PAGR1Q9BTK6 254 aa18.83■□□□□ 0.6
DDX56-202ENST00000415758 MTMR10Q9NXD2 777 aa18.83■□□□□ 0.6
DDX56-202ENST00000415758 SAP30BPQ9UHR5 308 aaKnown RBP18.83■□□□□ 0.6
DDX56-202ENST00000415758 NOP58Q9Y2X3 529 aaKnown RBP18.83■□□□□ 0.6
DDX56-202ENST00000415758 USP17L15C9J2P7 530 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 USP17L13C9JLJ4 530 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 USP17L11C9JVI0 530 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 USP17L18D6R9N7 530 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 USP17L22D6RA61 530 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 USP17L17D6RBQ6 530 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 USP17L19D6RCP7 530 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 USP17L20D6RJB6 530 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 CNMDO75829 334 aa18.82■□□□□ 0.6
DDX56-202ENST00000415758 GLRX3O76003 335 aaKnown RBP18.82■□□□□ 0.6
DDX56-202ENST00000415758 GH2P01242 217 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms