RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 PTH1RQ03431 593 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 TICAM2Q86XR7 235 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 KCNB2Q92953 911 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 RASSF4Q9H2L5 321 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 ARMT1Q9H993 441 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 GJA3Q9Y6H8 435 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 ZNF541Q9H0D2 1346 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 GRIN3BO60391 1043 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 FKBP1AP62942 108 aaKnown RBP15.26■□□□□ 0.03
HNF4A-204ENST00000415691 IQCB1Q15051 598 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 CAMK4Q16566 473 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 TPRNQ4KMQ1 711 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 GMLQ99445 158 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.26■□□□□ 0.033e-6■□□□□ 9.3
HNF4A-204ENST00000415691 DOCK2Q92608 1830 aa15.26■□□□□ 0.03
HNF4A-204ENST00000415691 EIF6P56537 245 aaKnown RBP15.25■□□□□ 0.03
HNF4A-204ENST00000415691 GPS2Q13227 327 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 CCDC83Q8IWF9 413 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 CKAP2LQ8IYA6 745 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 LCORLQ8N3X6 602 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 AATFQ9NY61 560 aaKnown RBP eCLIP15.25■□□□□ 0.03
HNF4A-204ENST00000415691 CCDC88AQ3V6T2 1871 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 GOLGA6L4A6NEF3 574 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 CCDC69A6NI79 296 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 GOLGA6L19H0YKK7 550 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 GPAA1O43292 621 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 MBD4O95243 580 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 STRBPQ96SI9 672 aaKnown RBP15.25■□□□□ 0.03
HNF4A-204ENST00000415691 SUGT1Q9Y2Z0 365 aa15.25■□□□□ 0.03
HNF4A-204ENST00000415691 MAGEB6P1A0A0J9YX57 407 aa15.24■□□□□ 0.03
HNF4A-204ENST00000415691 VPS37CA5D8V6 355 aaPredicted RBP15.24■□□□□ 0.03
HNF4A-204ENST00000415691 PRKAB2O43741 272 aa15.24■□□□□ 0.03
HNF4A-204ENST00000415691 LARGE1O95461 756 aa15.24■□□□□ 0.03
HNF4A-204ENST00000415691 TNIP1Q15025 636 aa15.24■□□□□ 0.03
HNF4A-204ENST00000415691 AIDAQ96BJ3 306 aa15.24■□□□□ 0.03
HNF4A-204ENST00000415691 RIOK1Q9BRS2 568 aaKnown RBP15.24■□□□□ 0.03
HNF4A-204ENST00000415691 TPM1P09493 284 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 GSTO1P78417 241 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 DNAJC25Q9H1X3 360 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 ZSWIM6Q9HCJ5 1215 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 CWC15Q9P013 229 aaKnown RBP15.23■□□□□ 0.03
HNF4A-204ENST00000415691 IMPACTQ9P2X3 320 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 ZNF646O15015 1829 aaPredicted RBP15.23■□□□□ 0.03
HNF4A-204ENST00000415691 SBF1O95248 1867 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 MROH7-TTC4A0A0A0MT08 1334 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 FOXP2O15409 715 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 CHRM1P11229 460 aaPredicted RBP15.23■□□□□ 0.03
HNF4A-204ENST00000415691 TMCO3Q6UWJ1 677 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 TEX2Q8IWB9 1127 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 GTF3C6Q969F1 213 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 OSBPL5Q9H0X9 879 aaPredicted RBP15.23■□□□□ 0.03
HNF4A-204ENST00000415691 PDRG1Q9NUG6 133 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 GEMIN8Q9NWZ8 242 aaKnown RBP15.23■□□□□ 0.03
HNF4A-204ENST00000415691 DAGLAQ9Y4D2 1042 aa15.23■□□□□ 0.03
HNF4A-204ENST00000415691 CTAGE5O15320 804 aa15.22■□□□□ 0.03
HNF4A-204ENST00000415691 LDHCP07864 332 aa15.22■□□□□ 0.03
HNF4A-204ENST00000415691 HSPD1P10809 573 aaKnown RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 CASTP20810 708 aaKnown RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 CRKP46108 304 aa15.22■□□□□ 0.03
HNF4A-204ENST00000415691 SNW1Q13573 536 aaKnown RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 ERCC6LQ2NKX8 1250 aa15.22■□□□□ 0.03
HNF4A-204ENST00000415691 LARP1BQ659C4 914 aaKnown RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 FAM163AQ96GL9 167 aaPredicted RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 SPATA32Q96LK8 384 aa15.22■□□□□ 0.03
HNF4A-204ENST00000415691 SRRTQ9BXP5 876 aaKnown RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■□□ 17.5
HNF4A-204ENST00000415691 BTDP43251 543 aa15.22■□□□□ 0.03
HNF4A-204ENST00000415691 TNNT3P45378 269 aaPredicted RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 NOP2P46087 812 aaKnown RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 GMPSP49915 693 aaPredicted RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 RBM5P52756 815 aaKnown RBP eCLIP15.22■□□□□ 0.037e-8■■□□□ 13.6
HNF4A-204ENST00000415691 ST3GAL1Q11201 340 aa15.22■□□□□ 0.03
HNF4A-204ENST00000415691 RGS22Q8NE09 1264 aa15.22■□□□□ 0.03
HNF4A-204ENST00000415691 AGBL3Q8NEM8 1001 aa15.22■□□□□ 0.03
HNF4A-204ENST00000415691 SH3RF3Q8TEJ3 882 aaPredicted RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 LEO1Q8WVC0 666 aaPredicted RBP15.22■□□□□ 0.03
HNF4A-204ENST00000415691 PSD3Q9NYI0 1048 aa15.22■□□□□ 0.03
HNF4A-204ENST00000415691 GPR75-ASB3A0A0A6YYF3 556 aa15.21■□□□□ 0.03
HNF4A-204ENST00000415691 DDNO94850 711 aaPredicted RBP15.21■□□□□ 0.03
HNF4A-204ENST00000415691 APOBEC3HQ6NTF7 200 aaKnown RBP15.21■□□□□ 0.03
HNF4A-204ENST00000415691 TEKT1Q969V4 418 aa15.21■□□□□ 0.03
HNF4A-204ENST00000415691 CYP46A1Q9Y6A2 500 aa15.21■□□□□ 0.03
HNF4A-204ENST00000415691 MYH7P12883 1935 aa15.21■□□□□ 0.03
HNF4A-204ENST00000415691 GAKO14976 1311 aa15.21■□□□□ 0.03
HNF4A-204ENST00000415691 MYO3BQ8WXR4 1341 aa15.21■□□□□ 0.03
HNF4A-204ENST00000415691 USP17L8P0C7I0 530 aa15.21■□□□□ 0.02
HNF4A-204ENST00000415691 STX1AQ16623 288 aa15.21■□□□□ 0.02
HNF4A-204ENST00000415691 IQUBQ8NA54 791 aa15.21■□□□□ 0.02
HNF4A-204ENST00000415691 SDR42E1Q8WUS8 393 aa15.21■□□□□ 0.02
HNF4A-204ENST00000415691 MAP4K1Q92918 833 aa15.21■□□□□ 0.02
HNF4A-204ENST00000415691 SLC4A4Q9Y6R1 1079 aa15.21■□□□□ 0.02
HNF4A-204ENST00000415691 APPP05067 770 aa15.2■□□□□ 0.02
HNF4A-204ENST00000415691 CFAP100Q494V2 611 aa15.2■□□□□ 0.02
HNF4A-204ENST00000415691 ARHGAP29Q52LW3 1261 aa15.2■□□□□ 0.02
HNF4A-204ENST00000415691 HHIPL2Q6UWX4 724 aa15.2■□□□□ 0.02
HNF4A-204ENST00000415691 SLF2Q8IX21 1173 aa15.2■□□□□ 0.02
HNF4A-204ENST00000415691 MRIQ9BWK5 157 aa15.2■□□□□ 0.02
HNF4A-204ENST00000415691 GSG1L2A8MUP6 293 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms