RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CACNB3P54284 484 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 TNFAIP1Q13829 316 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 FAM47AQ5JRC9 791 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 RBM26Q5T8P6 1007 aaKnown RBP16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 DPY19L2Q6NUT2 758 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 DGKHQ86XP1 1220 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 ZBED3Q96IU2 234 aaPredicted RBP16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 BRPF3Q9ULD4 1205 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 MYH8P13535 1937 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 COL2A1P02458 1487 aaPredicted RBP16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 GOLGA8BA8MQT2 603 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 TCP10L2B9ZVM9 353 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 WNT10BO00744 389 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 CDKL5O76039 1030 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 RASA1P20936 1047 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 PDCP20941 246 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 DDIT3P35638 169 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 METAP2P50579 478 aaKnown RBP eCLIP16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 CCT2P78371 535 aaKnown RBP16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 HMGN5P82970 282 aaKnown RBP16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 SCRN1Q12765 414 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 CATIPQ7Z7H3 387 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 NEDD1Q8NHV4 660 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 CCDC17Q96LX7 622 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 VEZTQ9HBM0 779 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 GPHNQ9NQX3 736 aaPredicted RBP16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 ZNF541Q9H0D2 1346 aa16.69■□□□□ 0.26
HMGA1P1-201ENST00000415560 CLRN2A0PK11 232 aa16.68■□□□□ 0.26
HMGA1P1-201ENST00000415560 GJB2P29033 226 aa16.68■□□□□ 0.26
HMGA1P1-201ENST00000415560 LMOD1P29536 600 aaPredicted RBP16.68■□□□□ 0.26
HMGA1P1-201ENST00000415560 GABPAQ06546 454 aa16.68■□□□□ 0.26
HMGA1P1-201ENST00000415560 SEC23AQ15436 765 aa16.68■□□□□ 0.26
HMGA1P1-201ENST00000415560 C9orf131Q5VYM1 1079 aa16.68■□□□□ 0.26
HMGA1P1-201ENST00000415560 APOA5Q6Q788 366 aa16.68■□□□□ 0.26
HMGA1P1-201ENST00000415560 ATRNL1Q5VV63 1379 aa16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 DDTLA6NHG4 134 aaPredicted RBP16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 GOLGA8AA7E2F4 631 aa16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 EVX2Q03828 476 aa16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 KIF4BQ2VIQ3 1234 aa16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 ZFPM1Q8IX07 1006 aa16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 ENAHQ8N8S7 591 aaPredicted RBP16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 FAM184AQ8NB25 1140 aa16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 NKX2-3Q8TAU0 364 aa16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 ANKS1AQ92625 1134 aa16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 KAT14Q9H8E8 782 aa16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 HERC5Q9UII4 1024 aaKnown RBP16.67■□□□□ 0.26
HMGA1P1-201ENST00000415560 NBPF9Q3BBW0 867 aa16.66■□□□□ 0.26
HMGA1P1-201ENST00000415560 ZNF654Q8IZM8 581 aa16.66■□□□□ 0.26
HMGA1P1-201ENST00000415560 SLC44A5Q8NCS7 719 aa16.66■□□□□ 0.26
HMGA1P1-201ENST00000415560 CSRNP1Q96S65 589 aa16.66■□□□□ 0.26
HMGA1P1-201ENST00000415560 GPRC5DQ9NZD1 345 aa16.66■□□□□ 0.26
HMGA1P1-201ENST00000415560 DDAH1O94760 285 aa16.65■□□□□ 0.26
HMGA1P1-201ENST00000415560 CERKLQ49MI3 558 aaPredicted RBP16.65■□□□□ 0.26
HMGA1P1-201ENST00000415560 TBC1D10BQ4KMP7 808 aaPredicted RBP16.65■□□□□ 0.26
HMGA1P1-201ENST00000415560 LARP1BQ659C4 914 aaKnown RBP16.65■□□□□ 0.26
HMGA1P1-201ENST00000415560 SAMD7Q7Z3H4 446 aa16.65■□□□□ 0.26
HMGA1P1-201ENST00000415560 MICU3Q86XE3 530 aa16.65■□□□□ 0.26
HMGA1P1-201ENST00000415560 NUP133Q8WUM0 1156 aa16.65■□□□□ 0.26
HMGA1P1-201ENST00000415560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.65■□□□□ 0.26
HMGA1P1-201ENST00000415560 RBM28Q9NW13 759 aaKnown RBP16.65■□□□□ 0.26
HMGA1P1-201ENST00000415560 ZC3H4Q9UPT8 1303 aaKnown RBP16.65■□□□□ 0.26
HMGA1P1-201ENST00000415560 ST3GAL1Q11201 340 aa16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 RAB3GAP1Q15042 981 aa16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 RTN1Q16799 776 aa16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 SH3BP5LQ7L8J4 393 aa16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 METTL16Q86W50 562 aaKnown RBP16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 FANCBQ8NB91 859 aa16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 CTCFLQ8NI51 663 aaPredicted RBP16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 SMARCC2Q8TAQ2 1214 aa16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 HOOK2Q96ED9 719 aa16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 MAP3K14Q99558 947 aa16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 CABP5Q9NP86 173 aa16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 HPS5Q9UPZ3 1129 aa16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 WDR33Q9C0J8 1336 aaKnown RBP16.64■□□□□ 0.25
HMGA1P1-201ENST00000415560 MPHOSPH10O00566 681 aaKnown RBP16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 TBC1D12O60347 775 aa16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 DDNO94850 711 aaPredicted RBP16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 KIF5BP33176 963 aa16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 SHMT1P34896 483 aa16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 TATDN1Q6P1N9 297 aa16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 NSUN7Q8NE18 718 aaKnown RBP16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 SENP2Q9HC62 589 aa16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 NCOA5Q9HCD5 579 aaKnown RBP16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 IL17RBQ9NRM6 502 aa16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
HMGA1P1-201ENST00000415560 SHTN1A0MZ66 631 aa16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 PTPDC1A2A3K4 754 aa16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 STX6O43752 255 aa16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 NMT2O60551 498 aa16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 TOP1P11387 765 aaKnown RBP16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 SSRP1Q08945 709 aaKnown RBP16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 TRIM22Q8IYM9 498 aa16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 WASF1Q92558 559 aa16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 ADARB2Q9NS39 739 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms