RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 COL17A1Q9UMD9 1497 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 F6X3S4 739 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 GREM1O60565 184 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 CEACAM5P06731 702 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 MPP2Q14168 576 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 ZNF746Q6NUN9 644 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 C22orf34Q6ZV56 151 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 HS2ST1Q7LGA3 356 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 TP53INP2Q8IXH6 220 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 TMEM87AQ8NBN3 555 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 TMEM87BQ96K49 555 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 COX4I2Q96KJ9 171 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 COPRSQ9NQ92 184 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 PAK6Q9NQU5 681 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 PRDM5Q9NQX1 630 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 GGT7Q9UJ14 662 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 U3KQE9 123 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 CYP7A1P22680 504 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 EIF4A3P38919 411 aaKnown RBP6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 IRAK1P51617 712 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 BNIP3Q12983 259 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 SNAP47Q5SQN1 464 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 PRAMEF13Q5VWM6 474 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 LETMD1Q6P1Q0 360 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 FBXL19Q6PCT2 694 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 FAM196AQ6ZSG2 479 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 FLCNQ8NFG4 579 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 RIN3Q8TB24 985 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 ACSF2Q96CM8 615 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 MIPEPQ99797 713 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 BACH2Q9BYV9 841 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 ADGRE2Q9UHX3 823 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 GNAT3A8MTJ3 354 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 PLCG1P19174 1290 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 VAMP1P23763 118 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 FAM160A1Q05DH4 1040 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 AOC3Q16853 763 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 NKPD1Q17RQ9 610 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 SFRP5Q5T4F7 317 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 SPRED2Q7Z698 418 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 ZNF296Q8WUU4 475 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 HRASLS5Q96KN8 279 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 LRRC3Q9BY71 257 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 METTL5Q9NRN9 209 aaKnown RBP6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 TPX2Q9ULW0 747 aaKnown RBP6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 CEP131Q9UPN4 1083 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 SUPT16HQ9Y5B9 1047 aaKnown RBP6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 CORINQ9Y5Q5 1042 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 ZNF865P0CJ78 1059 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 YARSP54577 528 aaKnown RBP6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 CBLL1Q75N03 491 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 REC114Q7Z4M0 266 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 WFDC3Q8IUB2 231 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 SPACA3Q8IXA5 215 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 ABI1Q8IZP0 508 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 ASB11Q8WXH4 323 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 CNTNAP4Q9C0A0 1308 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 CD8BP10966 210 aa6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 KIR3DL1P43629 444 aa6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 CLCN7P51798 805 aa6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 CWF19L2Q2TBE0 894 aaKnown RBP6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 CDH24Q86UP0 819 aa6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 SLFN12Q8IYM2 578 aa6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 POLR3KQ9Y2Y1 108 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 UPK3BL1B0FP48 263 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 UPK3BL2E5RIL1 263 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 ATE1O95260 518 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 TAL1P17542 331 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 ITIH2P19823 946 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 FUT4P22083 530 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 ZNF76P36508 570 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 ETV3P41162 512 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 MCTP1Q6DN14 999 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 FBXO27Q8NI29 283 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 XAGE3Q8WTP9 111 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 NT5C1AQ9BXI3 368 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 REV1Q9UBZ9 1251 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 ADAMTS1Q9UHI8 967 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 HTR3BO95264 441 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 MLECQ14165 292 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 ZNF574Q6ZN55 896 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 FAM13CQ8NE31 585 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 DNAJB8Q8NHS0 232 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 PPP1R13LQ8WUF5 828 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 CYB5D2Q8WUJ1 264 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 EHMT1Q9H9B1 1298 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 LMCD1Q9NZU5 365 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 PRR33A8MZF0 331 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 FAM155AB1AL88 458 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 CHURC1-FNTBB4DL54 471 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 GRIN3BO60391 1043 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 FANCCQ00597 558 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 ANGEL2Q5VTE6 544 aaKnown RBP6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 THAP5Q7Z6K1 395 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 REXO1Q8N1G1 1221 aaKnown RBP6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 MFSD4AQ8N468 514 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 RGS22Q8NE09 1264 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 PIWIL2Q8TC59 973 aaKnown RBP6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 RNF34Q969K3 372 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 HSPA12BQ96MM6 686 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms