RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 JPH1Q9HDC5 661 aaPredicted RBP10.94□□□□□ -0.66
TRA2B-204ENST00000414862 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
TRA2B-204ENST00000414862 DZANK1Q9NVP4 752 aa10.94□□□□□ -0.66
TRA2B-204ENST00000414862 QSER1Q2KHR3 1735 aa10.93□□□□□ -0.66
TRA2B-204ENST00000414862 TRPA1O75762 1119 aa10.93□□□□□ -0.66
TRA2B-204ENST00000414862 ALG1LQ6GMV1 187 aa10.93□□□□□ -0.66
TRA2B-204ENST00000414862 RGS22Q8NE09 1264 aa10.93□□□□□ -0.66
TRA2B-204ENST00000414862 EPS8L3Q8TE67 593 aaKnown RBP10.93□□□□□ -0.66
TRA2B-204ENST00000414862 SYTL4Q96C24 671 aaPredicted RBP10.93□□□□□ -0.66
TRA2B-204ENST00000414862 OSMRQ99650 979 aa10.93□□□□□ -0.66
TRA2B-204ENST00000414862 ZKSCAN3Q9BRR0 538 aa10.93□□□□□ -0.66
TRA2B-204ENST00000414862 PBX4Q9BYU1 374 aa10.93□□□□□ -0.66
TRA2B-204ENST00000414862 A0A1W2PP55 124 aa10.92□□□□□ -0.66
TRA2B-204ENST00000414862 LILRB5O75023 590 aa10.92□□□□□ -0.66
TRA2B-204ENST00000414862 SMNDC1O75940 238 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRA2B-204ENST00000414862 IRS1P35568 1242 aa10.92□□□□□ -0.66
TRA2B-204ENST00000414862 CEP135Q66GS9 1140 aa10.92□□□□□ -0.66
TRA2B-204ENST00000414862 C8orf86Q6ZUL3 223 aa10.92□□□□□ -0.66
TRA2B-204ENST00000414862 FBXO33Q7Z6M2 555 aa10.92□□□□□ -0.66
TRA2B-204ENST00000414862 FBF1Q8TES7 1133 aa10.92□□□□□ -0.66
TRA2B-204ENST00000414862 ANKRD24Q8TF21 1146 aa10.92□□□□□ -0.66
TRA2B-204ENST00000414862 TTC9Q92623 222 aa10.92□□□□□ -0.66
TRA2B-204ENST00000414862 BCL2L13Q9BXK5 485 aa10.92□□□□□ -0.66
TRA2B-204ENST00000414862 RGPD5Q99666 1765 aa10.91□□□□□ -0.66
TRA2B-204ENST00000414862 DDX54Q8TDD1 881 aaKnown RBP10.91□□□□□ -0.66
TRA2B-204ENST00000414862 ZNF526Q8TF50 670 aaPredicted RBP10.91□□□□□ -0.66
TRA2B-204ENST00000414862 ADCY9O60503 1353 aa10.9□□□□□ -0.66
TRA2B-204ENST00000414862 USP31Q70CQ4 1352 aa10.9□□□□□ -0.66
TRA2B-204ENST00000414862 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.66
TRA2B-204ENST00000414862 COL24A1Q17RW2 1714 aa10.9□□□□□ -0.66
TRA2B-204ENST00000414862 NFKBIEO00221 500 aa10.9□□□□□ -0.66
TRA2B-204ENST00000414862 GADD45BO75293 160 aaPredicted RBP10.9□□□□□ -0.66
TRA2B-204ENST00000414862 PRPF40AO75400 957 aaKnown RBP10.9□□□□□ -0.66
TRA2B-204ENST00000414862 HOXB4P17483 251 aaPredicted RBP10.9□□□□□ -0.66
TRA2B-204ENST00000414862 DGKGP49619 791 aa10.9□□□□□ -0.66
TRA2B-204ENST00000414862 FGD1P98174 961 aa10.9□□□□□ -0.66
TRA2B-204ENST00000414862 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRA2B-204ENST00000414862 KIAA0319Q5VV43 1072 aa10.9□□□□□ -0.66
TRA2B-204ENST00000414862 PI16Q6UXB8 463 aa10.9□□□□□ -0.66
TRA2B-204ENST00000414862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRA2B-204ENST00000414862 CCNL1Q9UK58 526 aaPredicted RBP10.9□□□□□ -0.66
TRA2B-204ENST00000414862 ADAMTS8Q9UP79 889 aa10.9□□□□□ -0.66
TRA2B-204ENST00000414862 SNRPNP63162 240 aaKnown RBP10.89□□□□□ -0.67
TRA2B-204ENST00000414862 TAGLNQ01995 201 aaKnown RBP10.89□□□□□ -0.67
TRA2B-204ENST00000414862 MSL1Q68DK7 614 aa10.89□□□□□ -0.67
TRA2B-204ENST00000414862 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
TRA2B-204ENST00000414862 POP1Q99575 1024 aaKnown RBP10.89□□□□□ -0.67
TRA2B-204ENST00000414862 PRDM6Q9NQX0 595 aa10.89□□□□□ -0.67
TRA2B-204ENST00000414862 TRIM33Q9UPN9 1127 aa10.89□□□□□ -0.67
TRA2B-204ENST00000414862 PDE2AO00408 941 aaPredicted RBP10.88□□□□□ -0.67
TRA2B-204ENST00000414862 HMGB2P26583 209 aaKnown RBP10.88□□□□□ -0.67
TRA2B-204ENST00000414862 AFF1P51825 1210 aaKnown RBP10.88□□□□□ -0.67
TRA2B-204ENST00000414862 GDF6Q6KF10 455 aaPredicted RBP10.88□□□□□ -0.67
TRA2B-204ENST00000414862 TMEM102Q8N9M5 508 aaPredicted RBP10.88□□□□□ -0.67
TRA2B-204ENST00000414862 GIPC2Q8TF65 315 aa10.88□□□□□ -0.67
TRA2B-204ENST00000414862 NXPE3Q969Y0 559 aa10.88□□□□□ -0.67
TRA2B-204ENST00000414862 EHD4Q9H223 541 aa10.88□□□□□ -0.67
TRA2B-204ENST00000414862 LIN7BQ9HAP6 207 aa10.88□□□□□ -0.67
TRA2B-204ENST00000414862 CD2APQ9Y5K6 639 aa10.88□□□□□ -0.67
TRA2B-204ENST00000414862 ROCK2O75116 1388 aaKnown RBP10.88□□□□□ -0.67
TRA2B-204ENST00000414862 USP47Q96K76 1375 aa10.88□□□□□ -0.67
TRA2B-204ENST00000414862 GRIK5Q16478 980 aa10.87□□□□□ -0.67
TRA2B-204ENST00000414862 NME9Q86XW9 330 aa10.87□□□□□ -0.67
TRA2B-204ENST00000414862 DUSP9Q99956 384 aaKnown RBP10.87□□□□□ -0.67
TRA2B-204ENST00000414862 SUV39H2Q9H5I1 410 aa10.87□□□□□ -0.67
TRA2B-204ENST00000414862 NSD2O96028 1365 aa10.87□□□□□ -0.67
TRA2B-204ENST00000414862 MON2Q7Z3U7 1717 aa10.87□□□□□ -0.67
TRA2B-204ENST00000414862 TUBGCP6Q96RT7 1819 aa10.86□□□□□ -0.67
TRA2B-204ENST00000414862 USP54Q70EL1 1684 aa10.86□□□□□ -0.67
TRA2B-204ENST00000414862 COL23A1Q86Y22 540 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-204ENST00000414862 FLAD1Q8NFF5 587 aa10.86□□□□□ -0.67
TRA2B-204ENST00000414862 FOXD4L4Q8WXT5 416 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-204ENST00000414862 LACRTQ9GZZ8 138 aa10.86□□□□□ -0.67
TRA2B-204ENST00000414862 SBNO2Q9Y2G9 1366 aa10.86□□□□□ -0.67
TRA2B-204ENST00000414862 FAM208AQ9UK61 1670 aaKnown RBP10.85□□□□□ -0.67
TRA2B-204ENST00000414862 EDC4Q6P2E9 1401 aaKnown RBP10.85□□□□□ -0.67
TRA2B-204ENST00000414862 DOT1LQ8TEK3 1739 aa10.85□□□□□ -0.67
TRA2B-204ENST00000414862 GRM2Q14416 872 aa10.85□□□□□ -0.67
TRA2B-204ENST00000414862 LINC00114Q6XXX2 140 aa10.85□□□□□ -0.67
TRA2B-204ENST00000414862 HDGFL2Q7Z4V5 671 aaPredicted RBP10.85□□□□□ -0.67
TRA2B-204ENST00000414862 CCNJLQ8IV13 435 aa10.85□□□□□ -0.67
TRA2B-204ENST00000414862 LTV1Q96GA3 475 aaPredicted RBP10.85□□□□□ -0.67
TRA2B-204ENST00000414862 TCF12Q99081 682 aa10.85□□□□□ -0.67
TRA2B-204ENST00000414862 BHLHE41Q9C0J9 482 aaPredicted RBP10.85□□□□□ -0.67
TRA2B-204ENST00000414862 MKL2Q9ULH7 1088 aa10.85□□□□□ -0.67
TRA2B-204ENST00000414862 LTN1O94822 1766 aa10.85□□□□□ -0.67
TRA2B-204ENST00000414862 KAT6BQ8WYB5 2073 aa10.85□□□□□ -0.67
TRA2B-204ENST00000414862 FAM181BA6NEQ2 426 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 NID1P14543 1247 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 PTPRAP18433 802 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 COL9A3Q14050 684 aaPredicted RBP10.84□□□□□ -0.67
TRA2B-204ENST00000414862 ADAMTSL4Q6UY14 1074 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 ASAP3Q8TDY4 903 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 BCO2Q9BYV7 579 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 RNF19AQ9NV58 838 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 PARP2Q9UGN5 583 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 SPG7Q9UQ90 795 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 LY75O60449 1722 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 IGSF1Q8N6C5 1336 aa10.84□□□□□ -0.67
TRA2B-204ENST00000414862 PODNQ7Z5L7 613 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms