RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 TRIM35Q9UPQ4 493 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 RILPL1Q5EBL4 403 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 JADE1Q6IE81 842 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 GBP6Q6ZN66 633 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 ANKRD35Q8N283 1001 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 VAV2P52735 878 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 KRT33BQ14525 404 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 CCDC26Q8TAB7 109 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 WDR66Q8TBY9 1149 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 CYP2J2P51589 502 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 VCX3BQ9H321 246 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 WDR7Q9Y4E6 1490 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 DOK7Q18PE1 504 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 TRIM50Q86XT4 487 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 HDAC11Q96DB2 347 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 TTC31Q49AM3 519 aaPredicted RBP20.51■□□□□ 0.87
SHANK3-202ENST00000414786 TTC6Q86TZ1 520 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 PDZD8Q8NEN9 1154 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 INPP5FQ9Y2H2 1132 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 H7C1D1 291 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 IL2RBP14784 551 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 SRGAP1Q7Z6B7 1085 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 SULF1Q8IWU6 871 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 HINFPQ9BQA5 517 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 CSRNP2Q9H175 543 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 NCOA2Q15596 1464 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 EXOC3O60645 756 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 SYNDIG1Q9H7V2 258 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 ZRANB1Q9UGI0 708 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 IFNB1P01574 187 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 ZNF513Q8N8E2 541 aaPredicted RBP20.51■□□□□ 0.87
SHANK3-202ENST00000414786 ABT1Q9ULW3 272 aaKnown RBP20.51■□□□□ 0.87
SHANK3-202ENST00000414786 BUB1BO60566 1050 aaPredicted RBP20.51■□□□□ 0.87
SHANK3-202ENST00000414786 ATP6V1E1P36543 226 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 SLC1A4P43007 532 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 RAB3IPQ96QF0 476 aaPredicted RBP20.51■□□□□ 0.87
SHANK3-202ENST00000414786 EFCC1Q9HA90 598 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.51■□□□□ 0.871e-6■■■■□ 24.5
SHANK3-202ENST00000414786 RNF113AO15541 343 aaKnown RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 TACO1Q9BSH4 297 aaKnown RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 SCNN1DP51172 638 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 TBC1D8BQ0IIM8 1120 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 FAM47AQ5JRC9 791 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 BICC1Q9H694 974 aaKnown RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 LMCD1Q9NZU5 365 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 CCDC62Q6P9F0 684 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 RSAD2Q8WXG1 361 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 BMP15O95972 392 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 PDE6AP16499 860 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 ZNF654Q8IZM8 581 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 ABI1Q8IZP0 508 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 SPDL1Q96EA4 605 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 GDAP1L1Q96MZ0 367 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 NCKAP5LQ9HCH0 1330 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 MUM1L1Q5H9M0 696 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 SZRD1Q7Z422 152 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 CCDC105Q8IYK2 499 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 V9GY48 417 aaPredicted RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 ALAS1P13196 640 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 HIBADHP31937 336 aaKnown RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 THRAP3Q9Y2W1 955 aaKnown RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 PAXBP1Q9Y5B6 917 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 I3L4J1 428 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.49■□□□□ 0.87
SHANK3-202ENST00000414786 UHMK1Q8TAS1 419 aaKnown RBP20.49■□□□□ 0.87
SHANK3-202ENST00000414786 ARHGAP42A6NI28 874 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 ABCB4P21439 1286 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 ANKRD2Q9GZV1 360 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 BLZF1Q9H2G9 400 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 CEP104O60308 925 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 IVLP07476 585 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 TIMM10P62072 90 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 ZBTB41Q5SVQ8 909 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 CMTR1Q8N1G2 835 aaKnown RBP20.49■□□□□ 0.87
SHANK3-202ENST00000414786 MORC4Q8TE76 937 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 NCAPGQ9BPX3 1015 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 EBAG9O00559 213 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 BAG2O95816 211 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 LRFN2Q9ULH4 789 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 CUX1P39880 1505 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 ATAD2BQ9ULI0 1458 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 SPECC1L-ADORA2AF8WAN1 911 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 UBL4BQ8N7F7 174 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 ZNF467Q7Z7K2 595 aaPredicted RBP20.48■□□□□ 0.87
SHANK3-202ENST00000414786 FAM76AQ8TAV0 307 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 SPAG1Q07617 926 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 HERC4Q5GLZ8 1057 aaPredicted RBP20.48■□□□□ 0.87
SHANK3-202ENST00000414786 GABPB2Q8TAK5 448 aaPredicted RBP20.48■□□□□ 0.87
SHANK3-202ENST00000414786 EXOC7Q9UPT5 735 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 IL15P40933 162 aaPredicted RBP20.48■□□□□ 0.87
SHANK3-202ENST00000414786 RNASELQ05823 741 aaKnown RBP20.48■□□□□ 0.87
SHANK3-202ENST00000414786 KRT222Q8N1A0 295 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 PCDHB13Q9Y5F0 798 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 HACE1Q8IYU2 909 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 PPP4R1Q8TF05 950 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 DEPTORQ8TB45 409 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms