RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 IL27Q8NEV9 243 aa13.72□□□□□ -0.21
CRIM1-202ENST00000413985 FERMT2Q96AC1 680 aa13.72□□□□□ -0.21
CRIM1-202ENST00000413985 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.216e-11■■■■■ 56.3
CRIM1-202ENST00000413985 C9orf78Q9NZ63 289 aaPredicted RBP13.72□□□□□ -0.21
CRIM1-202ENST00000413985 PLXNA1Q9UIW2 1896 aa13.72□□□□□ -0.21
CRIM1-202ENST00000413985 MYBBP1AQ9BQG0 1328 aaKnown RBP13.71□□□□□ -0.21
CRIM1-202ENST00000413985 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.71□□□□□ -0.21
CRIM1-202ENST00000413985 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.71□□□□□ -0.21
CRIM1-202ENST00000413985 GRXCR1A8MXD5 290 aa13.71□□□□□ -0.21
CRIM1-202ENST00000413985 IFIT1P09914 478 aaKnown RBP13.71□□□□□ -0.21
CRIM1-202ENST00000413985 BMP1P13497 986 aa13.71□□□□□ -0.21
CRIM1-202ENST00000413985 SHROOM1Q2M3G4 852 aaPredicted RBP13.71□□□□□ -0.21
CRIM1-202ENST00000413985 MFSD14CQ5VZR4 134 aa13.71□□□□□ -0.21
CRIM1-202ENST00000413985 NPLOC4Q8TAT6 608 aa13.71□□□□□ -0.21
CRIM1-202ENST00000413985 EDC3Q96F86 508 aaKnown RBP13.71□□□□□ -0.21
CRIM1-202ENST00000413985 OSBPL5Q9H0X9 879 aaPredicted RBP13.71□□□□□ -0.21
CRIM1-202ENST00000413985 BICC1Q9H694 974 aaKnown RBP13.71□□□□□ -0.21
CRIM1-202ENST00000413985 UTYO14607 1347 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 GAKO14976 1311 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 KIF16BQ96L93 1317 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 FAM86C2PA6NEL3 165 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 USP17L5A8MUK1 530 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 NBPF7P0C2Y1 421 aaPredicted RBP13.7□□□□□ -0.22
CRIM1-202ENST00000413985 IGFBP4P22692 258 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 HOXA7P31268 230 aaPredicted RBP13.7□□□□□ -0.22
CRIM1-202ENST00000413985 CAP2P40123 477 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 ADCYAP1R1P41586 468 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 KCNQ1P51787 676 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 JAG1P78504 1218 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 TLE2Q04725 743 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 PUM3Q15397 648 aaKnown RBP13.7□□□□□ -0.22
CRIM1-202ENST00000413985 CCAR1Q8IX12 1150 aaKnown RBP13.7□□□□□ -0.22
CRIM1-202ENST00000413985 PBX4Q9BYU1 374 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 REV3LO60673 3130 aa13.7□□□□□ -0.22
CRIM1-202ENST00000413985 KBTBD13C9JR72 458 aa13.69□□□□□ -0.22
CRIM1-202ENST00000413985 TBC1D12O60347 775 aa13.69□□□□□ -0.22
CRIM1-202ENST00000413985 MSCO60682 206 aa13.69□□□□□ -0.22
CRIM1-202ENST00000413985 CNMDO75829 334 aa13.69□□□□□ -0.22
CRIM1-202ENST00000413985 CYBAP13498 195 aa13.69□□□□□ -0.22
CRIM1-202ENST00000413985 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
CRIM1-202ENST00000413985 KHSRPQ92945 711 aaKnown RBP eCLIP13.69□□□□□ -0.22
CRIM1-202ENST00000413985 C11orf16Q9NQ32 467 aa13.69□□□□□ -0.22
CRIM1-202ENST00000413985 NCOR1O75376 2440 aa13.68□□□□□ -0.22
CRIM1-202ENST00000413985 BTDP43251 543 aa13.68□□□□□ -0.22
CRIM1-202ENST00000413985 BACE1P56817 501 aa13.68□□□□□ -0.22
CRIM1-202ENST00000413985 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
CRIM1-202ENST00000413985 TMEM31Q5JXX7 168 aa13.68□□□□□ -0.22
CRIM1-202ENST00000413985 WDR78Q5VTH9 848 aa13.68□□□□□ -0.22
CRIM1-202ENST00000413985 CWC22Q9HCG8 908 aaKnown RBP13.68□□□□□ -0.22
CRIM1-202ENST00000413985 CACNA1FO60840 1977 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 MYO9BQ13459 2157 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 CLTBP09497 229 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 SLC5A1P13866 664 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 RHBDL3P58872 404 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 ATP2B2Q01814 1243 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 FPGSQ05932 587 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 RABL6Q3YEC7 729 aaPredicted RBP13.67□□□□□ -0.22
CRIM1-202ENST00000413985 SLC4A10Q6U841 1118 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
CRIM1-202ENST00000413985 TBC1D2Q9BYX2 928 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 TMOD4Q9NZQ9 345 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 SIPA1L1O43166 1804 aa13.67□□□□□ -0.22
CRIM1-202ENST00000413985 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 IGHA2P01877 340 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 RAG1P15918 1043 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 PTPREP23469 700 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 PHKA1P46020 1223 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 LRRC41Q15345 812 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 CCDC129Q6ZRS4 1044 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 MICALL1Q8N3F8 863 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 ARRDC4Q8NCT1 418 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 LPIN2Q92539 896 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 AS3MTQ9HBK9 375 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
CRIM1-202ENST00000413985 TACC3Q9Y6A5 838 aa13.66□□□□□ -0.22
CRIM1-202ENST00000413985 KIAA0355O15063 1070 aa13.65□□□□□ -0.22
CRIM1-202ENST00000413985 PQBP1O60828 265 aaKnown RBP13.65□□□□□ -0.22
CRIM1-202ENST00000413985 VAMP4O75379 141 aa13.65□□□□□ -0.22
CRIM1-202ENST00000413985 FAM47AQ5JRC9 791 aa13.65□□□□□ -0.22
CRIM1-202ENST00000413985 PRAMEF19Q5SWL8 479 aa13.65□□□□□ -0.22
CRIM1-202ENST00000413985 C1orf53Q5VUE5 145 aa13.65□□□□□ -0.22
CRIM1-202ENST00000413985 DZIP1Q86YF9 867 aaKnown RBP13.65□□□□□ -0.22
CRIM1-202ENST00000413985 WDR18Q9BV38 432 aa13.65□□□□□ -0.22
CRIM1-202ENST00000413985 SLC15A5A6NIM6 579 aa13.64□□□□□ -0.23
CRIM1-202ENST00000413985 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
CRIM1-202ENST00000413985 HOXC6P09630 235 aa13.64□□□□□ -0.23
CRIM1-202ENST00000413985 MRE11P49959 708 aa13.64□□□□□ -0.23
CRIM1-202ENST00000413985 GRB14Q14449 540 aa13.64□□□□□ -0.23
CRIM1-202ENST00000413985 ZNF384Q8TF68 577 aa13.64□□□□□ -0.23
CRIM1-202ENST00000413985 EMILIN3Q9NT22 766 aa13.64□□□□□ -0.23
CRIM1-202ENST00000413985 BDP1A6H8Y1 2624 aa13.64□□□□□ -0.23
CRIM1-202ENST00000413985 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
CRIM1-202ENST00000413985 GBF1Q92538 1859 aa13.63□□□□□ -0.23
CRIM1-202ENST00000413985 C16orf59Q7L2K0 433 aa13.63□□□□□ -0.23
CRIM1-202ENST00000413985 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
CRIM1-202ENST00000413985 NKX2-4Q9H2Z4 354 aa13.63□□□□□ -0.23
CRIM1-202ENST00000413985 TMEM39AQ9NV64 488 aa13.63□□□□□ -0.23
CRIM1-202ENST00000413985 ABCF2Q9UG63 623 aa13.63□□□□□ -0.23
CRIM1-202ENST00000413985 FANCIQ9NVI1 1328 aa13.63□□□□□ -0.23
CRIM1-202ENST00000413985 CHD9Q3L8U1 2897 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms