RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 IRX3P78415 501 aaPredicted RBP20.36■□□□□ 0.85
COL6A2-205ENST00000413758 JAG1P78504 1218 aa20.36■□□□□ 0.85
COL6A2-205ENST00000413758 PRKCZQ05513 592 aa20.36■□□□□ 0.85
COL6A2-205ENST00000413758 SHROOM1Q2M3G4 852 aaPredicted RBP20.36■□□□□ 0.85
COL6A2-205ENST00000413758 METTL16Q86W50 562 aaKnown RBP20.36■□□□□ 0.85
COL6A2-205ENST00000413758 EDC3Q96F86 508 aaKnown RBP20.36■□□□□ 0.85
COL6A2-205ENST00000413758 GINM1Q9NU53 330 aa20.36■□□□□ 0.85
COL6A2-205ENST00000413758 PAG1Q9NWQ8 432 aa20.36■□□□□ 0.85
COL6A2-205ENST00000413758 SERPINB13Q9UIV8 391 aa20.36■□□□□ 0.85
COL6A2-205ENST00000413758 TAOK2Q9UL54 1235 aa20.36■□□□□ 0.85
COL6A2-205ENST00000413758 TNRC18O15417 2968 aaPredicted RBP20.36■□□□□ 0.85
COL6A2-205ENST00000413758 SMARCA5O60264 1052 aaPredicted RBP20.35■□□□□ 0.85
COL6A2-205ENST00000413758 BACE1P56817 501 aa20.35■□□□□ 0.85
COL6A2-205ENST00000413758 SH3D19Q5HYK7 790 aa20.35■□□□□ 0.85
COL6A2-205ENST00000413758 RIOK1Q9BRS2 568 aaKnown RBP20.35■□□□□ 0.85
COL6A2-205ENST00000413758 C19orf81C9J6K1 198 aa20.34■□□□□ 0.85
COL6A2-205ENST00000413758 USP17L10C9JJH3 530 aa20.34■□□□□ 0.85
COL6A2-205ENST00000413758 GH2P01242 217 aa20.34■□□□□ 0.85
COL6A2-205ENST00000413758 ATP5JP18859 108 aa20.34■□□□□ 0.85
COL6A2-205ENST00000413758 GCLCP48506 637 aaPredicted RBP20.34■□□□□ 0.85
COL6A2-205ENST00000413758 COA7Q96BR5 231 aa20.34■□□□□ 0.85
COL6A2-205ENST00000413758 FEZ1Q99689 392 aa20.34■□□□□ 0.85
COL6A2-205ENST00000413758 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.34■□□□□ 0.85
COL6A2-205ENST00000413758 ASCC2Q9H1I8 757 aaPredicted RBP20.34■□□□□ 0.85
COL6A2-205ENST00000413758 GABRQQ9UN88 632 aa20.34■□□□□ 0.85
COL6A2-205ENST00000413758 MGAMO43451 1857 aa20.34■□□□□ 0.85
COL6A2-205ENST00000413758 RBBP6Q7Z6E9 1792 aaKnown RBP20.34■□□□□ 0.85
COL6A2-205ENST00000413758 HTTP42858 3142 aa20.33■□□□□ 0.85
COL6A2-205ENST00000413758 UBXN2AP68543 259 aa20.33■□□□□ 0.85
COL6A2-205ENST00000413758 RAB3GAP1Q15042 981 aa20.33■□□□□ 0.85
COL6A2-205ENST00000413758 CERKLQ49MI3 558 aaPredicted RBP20.33■□□□□ 0.85
COL6A2-205ENST00000413758 PRPF38BQ5VTL8 546 aaKnown RBP20.33■□□□□ 0.85
COL6A2-205ENST00000413758 EHD4Q9H223 541 aa20.33■□□□□ 0.85
COL6A2-205ENST00000413758 CABP5Q9NP86 173 aa20.33■□□□□ 0.85
COL6A2-205ENST00000413758 MCM9Q9NXL9 1143 aa20.33■□□□□ 0.85
COL6A2-205ENST00000413758 PDE4DIPQ5VU43 2346 aa20.33■□□□□ 0.84
COL6A2-205ENST00000413758 LOC285556D6RIA3 1793 aa20.33■□□□□ 0.84
COL6A2-205ENST00000413758 KIAA0100Q14667 2235 aaKnown RBP20.33■□□□□ 0.84
COL6A2-205ENST00000413758 FLT3LGP49771 235 aa20.32■□□□□ 0.84
COL6A2-205ENST00000413758 MTFR1Q15390 333 aa20.32■□□□□ 0.84
COL6A2-205ENST00000413758 ZYXQ15942 572 aaKnown RBP20.32■□□□□ 0.84
COL6A2-205ENST00000413758 FAM110CQ1W6H9 321 aa20.32■□□□□ 0.84
COL6A2-205ENST00000413758 ABCB5Q2M3G0 1257 aa20.32■□□□□ 0.84
COL6A2-205ENST00000413758 LCORLQ8N3X6 602 aa20.32■□□□□ 0.84
COL6A2-205ENST00000413758 SLAIN1Q8ND83 568 aa20.32■□□□□ 0.84
COL6A2-205ENST00000413758 HAUS7Q99871 368 aa20.32■□□□□ 0.84
COL6A2-205ENST00000413758 ARMT1Q9H993 441 aa20.32■□□□□ 0.84
COL6A2-205ENST00000413758 ADCY3O60266 1144 aa20.31■□□□□ 0.84
COL6A2-205ENST00000413758 TATDN1Q6P1N9 297 aa20.31■□□□□ 0.84
COL6A2-205ENST00000413758 USP17L2Q6R6M4 530 aa20.31■□□□□ 0.84
COL6A2-205ENST00000413758 SDR42E1Q8WUS8 393 aa20.31■□□□□ 0.84
COL6A2-205ENST00000413758 TCRBV5S4A2TA0A5A2 114 aa20.3■□□□□ 0.84
COL6A2-205ENST00000413758 MBD4O95243 580 aa20.3■□□□□ 0.84
COL6A2-205ENST00000413758 ADD2P35612 726 aa20.3■□□□□ 0.84
COL6A2-205ENST00000413758 PLCD1P51178 756 aa20.3■□□□□ 0.84
COL6A2-205ENST00000413758 GPATCH3Q96I76 525 aa20.3■□□□□ 0.84
COL6A2-205ENST00000413758 P2RX7Q99572 595 aaKnown RBP20.3■□□□□ 0.84
COL6A2-205ENST00000413758 RNF208Q9H0X6 261 aa20.3■□□□□ 0.84
COL6A2-205ENST00000413758 NAV1Q8NEY1 1877 aa20.3■□□□□ 0.84
COL6A2-205ENST00000413758 MPHOSPH10O00566 681 aaKnown RBP20.29■□□□□ 0.84
COL6A2-205ENST00000413758 CCL5P13501 91 aa20.29■□□□□ 0.84
COL6A2-205ENST00000413758 ELNP15502 786 aa20.29■□□□□ 0.84
COL6A2-205ENST00000413758 SLFNL1Q499Z3 407 aa20.29■□□□□ 0.84
COL6A2-205ENST00000413758 ZSCAN25Q6NSZ9 544 aa20.29■□□□□ 0.84
COL6A2-205ENST00000413758 HOXA7P31268 230 aaPredicted RBP20.28■□□□□ 0.84
COL6A2-205ENST00000413758 CCAR1Q8IX12 1150 aaKnown RBP20.28■□□□□ 0.84
COL6A2-205ENST00000413758 AMOTL1Q8IY63 956 aa20.28■□□□□ 0.84
COL6A2-205ENST00000413758 DDRGK1Q96HY6 314 aa20.28■□□□□ 0.84
COL6A2-205ENST00000413758 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
COL6A2-205ENST00000413758 DCP1AQ9NPI6 582 aaPredicted RBP20.28■□□□□ 0.84
COL6A2-205ENST00000413758 EMILIN3Q9NT22 766 aa20.28■□□□□ 0.84
COL6A2-205ENST00000413758 ECHDC1Q9NTX5 307 aa20.28■□□□□ 0.84
COL6A2-205ENST00000413758 PRKAB2O43741 272 aa20.27■□□□□ 0.84
COL6A2-205ENST00000413758 CYP2D6P10635 497 aa20.27■□□□□ 0.84
COL6A2-205ENST00000413758 SHMT1P34896 483 aa20.27■□□□□ 0.84
COL6A2-205ENST00000413758 USP14P54578 494 aa20.27■□□□□ 0.84
COL6A2-205ENST00000413758 HERVK_113P62684 666 aa20.27■□□□□ 0.84
COL6A2-205ENST00000413758 NKX2-3Q8TAU0 364 aa20.27■□□□□ 0.84
COL6A2-205ENST00000413758 PAGR1Q9BTK6 254 aa20.27■□□□□ 0.84
COL6A2-205ENST00000413758 DCTPP1Q9H773 170 aa20.27■□□□□ 0.84
COL6A2-205ENST00000413758 INHAP05111 366 aa20.26■□□□□ 0.83
COL6A2-205ENST00000413758 GPRC5AQ8NFJ5 357 aa20.26■□□□□ 0.83
COL6A2-205ENST00000413758 CWC22Q9HCG8 908 aaKnown RBP20.26■□□□□ 0.83
COL6A2-205ENST00000413758 EVX2Q03828 476 aa20.25■□□□□ 0.83
COL6A2-205ENST00000413758 IRF5Q13568 498 aa20.25■□□□□ 0.83
COL6A2-205ENST00000413758 SEPT2Q15019 361 aa20.25■□□□□ 0.83
COL6A2-205ENST00000413758 UBE3CQ15386 1083 aa20.25■□□□□ 0.83
COL6A2-205ENST00000413758 ACER1Q8TDN7 264 aa20.25■□□□□ 0.83
COL6A2-205ENST00000413758 PXYLP1Q8TE99 480 aa20.25■□□□□ 0.83
COL6A2-205ENST00000413758 UNC93B1Q9H1C4 597 aa20.25■□□□□ 0.83
COL6A2-205ENST00000413758 ATP8A2Q9NTI2 1148 aa20.25■□□□□ 0.83
COL6A2-205ENST00000413758 MORF4L1Q9UBU8 362 aa20.25■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L15C9J2P7 530 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L13C9JLJ4 530 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L11C9JVI0 530 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L18D6R9N7 530 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L22D6RA61 530 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L17D6RBQ6 530 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L19D6RCP7 530 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L20D6RJB6 530 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms