RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 ZNF18P17022 549 aa21.74■■□□□ 1.07
TNFRSF8-202ENST00000413146 SARSP49591 514 aaKnown RBP21.74■■□□□ 1.07
TNFRSF8-202ENST00000413146 NUP133Q8WUM0 1156 aa21.74■■□□□ 1.07
TNFRSF8-202ENST00000413146 AK7Q96M32 723 aa21.74■■□□□ 1.07
TNFRSF8-202ENST00000413146 RNF41Q9H4P4 317 aaPredicted RBP21.74■■□□□ 1.07
TNFRSF8-202ENST00000413146 SRPRBQ9Y5M8 271 aaKnown RBP21.74■■□□□ 1.07
TNFRSF8-202ENST00000413146 LTBP4Q8N2S1 1624 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 VWA3AA6NCI4 1184 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 SNAP23O00161 211 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 STX10O60499 249 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 RCAN1P53805 252 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 TERF2Q15554 542 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 ZNF827Q17R98 1081 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 NUTM2AQ8IVF1 878 aaPredicted RBP21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 TRMT44Q8IYL2 757 aaKnown RBP21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 ZNF34Q8IZ26 560 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 ZNF654Q8IZM8 581 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 CMTR1Q8N1G2 835 aaKnown RBP21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 ATP2B1P20020 1258 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 GRAMD1CQ8IYS0 662 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 FANCBQ8NB91 859 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 UBAC1Q9BSL1 405 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 PARP3Q9Y6F1 533 aa21.73■■□□□ 1.07
TNFRSF8-202ENST00000413146 IL6STP40189 918 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF8-202ENST00000413146 FAM177A1Q8N128 213 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF8-202ENST00000413146 FANCGO15287 622 aa21.72■■□□□ 1.07
TNFRSF8-202ENST00000413146 TC2NQ8N9U0 490 aa21.72■■□□□ 1.07
TNFRSF8-202ENST00000413146 CARD6Q9BX69 1037 aa21.72■■□□□ 1.07
TNFRSF8-202ENST00000413146 PLCH1Q4KWH8 1693 aa21.71■■□□□ 1.07
TNFRSF8-202ENST00000413146 EFCAB8A8MWE9 144 aa21.71■■□□□ 1.07
TNFRSF8-202ENST00000413146 ACTN4O43707 911 aaKnown RBP21.71■■□□□ 1.07
TNFRSF8-202ENST00000413146 TADA3O75528 432 aa21.71■■□□□ 1.07
TNFRSF8-202ENST00000413146 MIGA1Q8NAN2 632 aa21.71■■□□□ 1.07
TNFRSF8-202ENST00000413146 CCDC34Q96HJ3 373 aa21.71■■□□□ 1.07
TNFRSF8-202ENST00000413146 CABP5Q9NP86 173 aa21.71■■□□□ 1.07
TNFRSF8-202ENST00000413146 RAI14Q9P0K7 980 aa21.71■■□□□ 1.07
TNFRSF8-202ENST00000413146 CASQ1P31415 396 aa21.7■■□□□ 1.07
TNFRSF8-202ENST00000413146 PLCD1P51178 756 aa21.7■■□□□ 1.07
TNFRSF8-202ENST00000413146 ADKP55263 362 aaKnown RBP21.7■■□□□ 1.07
TNFRSF8-202ENST00000413146 OXER1Q8TDS5 423 aa21.7■■□□□ 1.07
TNFRSF8-202ENST00000413146 CSRNP2Q9H175 543 aa21.7■■□□□ 1.07
TNFRSF8-202ENST00000413146 LRP2BPQ9P2M1 347 aa21.7■■□□□ 1.07
TNFRSF8-202ENST00000413146 SLIT2O94813 1529 aa21.7■■□□□ 1.06
TNFRSF8-202ENST00000413146 TPM1P09493 284 aa21.7■■□□□ 1.06
TNFRSF8-202ENST00000413146 AKAP17AQ02040 695 aaKnown RBP21.7■■□□□ 1.06
TNFRSF8-202ENST00000413146 PPARAQ07869 468 aa21.7■■□□□ 1.06
TNFRSF8-202ENST00000413146 RTL9Q8NET4 1388 aa21.7■■□□□ 1.06
TNFRSF8-202ENST00000413146 XBP1P17861 261 aa21.69■■□□□ 1.06
TNFRSF8-202ENST00000413146 BCAMP50895 628 aa21.69■■□□□ 1.06
TNFRSF8-202ENST00000413146 GNG11P61952 73 aa21.69■■□□□ 1.06
TNFRSF8-202ENST00000413146 TMCO3Q6UWJ1 677 aa21.69■■□□□ 1.06
TNFRSF8-202ENST00000413146 FHOD1Q9Y613 1164 aa21.69■■□□□ 1.06
TNFRSF8-202ENST00000413146 ERCC5P28715 1186 aaPredicted RBP21.69■■□□□ 1.06
TNFRSF8-202ENST00000413146 RNF26Q9BY78 433 aaPredicted RBP21.69■■□□□ 1.06
TNFRSF8-202ENST00000413146 SEC31BQ9NQW1 1179 aa21.69■■□□□ 1.06
TNFRSF8-202ENST00000413146 SAMSN1Q9NSI8 373 aaKnown RBP21.69■■□□□ 1.06
TNFRSF8-202ENST00000413146 TOGARAM2Q6ZUX3 1019 aa21.68■■□□□ 1.06
TNFRSF8-202ENST00000413146 TRIM75PA6NK02 468 aa21.68■■□□□ 1.06
TNFRSF8-202ENST00000413146 PNMA6AP0CW24 399 aaPredicted RBP21.68■■□□□ 1.06
TNFRSF8-202ENST00000413146 SUSD4Q5VX71 490 aa21.68■■□□□ 1.06
TNFRSF8-202ENST00000413146 USP49Q70CQ1 688 aa21.68■■□□□ 1.06
TNFRSF8-202ENST00000413146 SPATA20Q8TB22 786 aa21.68■■□□□ 1.06
TNFRSF8-202ENST00000413146 TNKSO95271 1327 aa21.68■■□□□ 1.06
TNFRSF8-202ENST00000413146 IGHMBP2P38935 993 aaKnown RBP21.67■■□□□ 1.06
TNFRSF8-202ENST00000413146 PPP2R5BQ15173 497 aa21.67■■□□□ 1.06
TNFRSF8-202ENST00000413146 ESR2Q92731 530 aa21.67■■□□□ 1.06
TNFRSF8-202ENST00000413146 DHX58Q96C10 678 aa21.67■■□□□ 1.06
TNFRSF8-202ENST00000413146 ST7Q9NRC1 585 aa21.67■■□□□ 1.06
TNFRSF8-202ENST00000413146 BTG4Q9NY30 223 aa21.67■■□□□ 1.06
TNFRSF8-202ENST00000413146 AATFQ9NY61 560 aaKnown RBP eCLIP21.67■■□□□ 1.06
TNFRSF8-202ENST00000413146 MINDY4BA8MYZ0 360 aa21.67■■□□□ 1.06
TNFRSF8-202ENST00000413146 NR1I3Q14994 352 aa21.67■■□□□ 1.06
TNFRSF8-202ENST00000413146 WDR24Q96S15 920 aa21.67■■□□□ 1.06
TNFRSF8-202ENST00000413146 CYP7A1P22680 504 aa21.66■■□□□ 1.06
TNFRSF8-202ENST00000413146 CCDC152Q4G0S7 254 aa21.66■■□□□ 1.06
TNFRSF8-202ENST00000413146 MED15Q96RN5 788 aa21.66■■□□□ 1.06
TNFRSF8-202ENST00000413146 A0A1B0GTH6 734 aa21.66■■□□□ 1.06
TNFRSF8-202ENST00000413146 KRT2P35908 639 aa21.66■■□□□ 1.06
TNFRSF8-202ENST00000413146 ZRANB2O95218 330 aaKnown RBP eCLIP21.65■■□□□ 1.06
TNFRSF8-202ENST00000413146 SEC23AQ15436 765 aa21.65■■□□□ 1.06
TNFRSF8-202ENST00000413146 CT47A1Q5JQC4 288 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF8-202ENST00000413146 SDR42E1Q8WUS8 393 aa21.65■■□□□ 1.06
TNFRSF8-202ENST00000413146 VPS54Q9P1Q0 977 aa21.65■■□□□ 1.06
TNFRSF8-202ENST00000413146 SYNRGQ9UMZ2 1314 aa21.65■■□□□ 1.06
TNFRSF8-202ENST00000413146 AKR1B15C9JRZ8 316 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF8-202ENST00000413146 FAM193AP78312 1265 aa21.65■■□□□ 1.06
TNFRSF8-202ENST00000413146 MAP3K9P80192 1104 aa21.65■■□□□ 1.06
TNFRSF8-202ENST00000413146 MRFAP1Q9Y605 127 aa21.65■■□□□ 1.06
TNFRSF8-202ENST00000413146 MYH2Q9UKX2 1941 aa21.64■■□□□ 1.06
TNFRSF8-202ENST00000413146 FAM205CA6NFA0 338 aa21.64■■□□□ 1.05
TNFRSF8-202ENST00000413146 AFMP43652 599 aa21.64■■□□□ 1.05
TNFRSF8-202ENST00000413146 PPP2R3AQ06190 1150 aa21.64■■□□□ 1.05
TNFRSF8-202ENST00000413146 DESI2Q9BSY9 194 aa21.64■■□□□ 1.05
TNFRSF8-202ENST00000413146 DISP2A7MBM2 1401 aa21.64■■□□□ 1.05
TNFRSF8-202ENST00000413146 PHLPP1O60346 1717 aa21.64■■□□□ 1.05
TNFRSF8-202ENST00000413146 MAGEB6P1A0A0J9YX57 407 aa21.63■■□□□ 1.05
TNFRSF8-202ENST00000413146 SPATA1Q5VX52 437 aa21.63■■□□□ 1.05
TNFRSF8-202ENST00000413146 KLHL10Q6JEL2 608 aa21.63■■□□□ 1.05
TNFRSF8-202ENST00000413146 CREBRFQ8IUR6 639 aa21.63■■□□□ 1.05
TNFRSF8-202ENST00000413146 EPSTI1Q96J88 318 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms