RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 C16orf86Q6ZW13 317 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 SH3BP5LQ7L8J4 393 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 SLF2Q8IX21 1173 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 NUP133Q8WUM0 1156 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 LEO1Q8WVC0 666 aaPredicted RBP10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 C8orf76Q96K31 380 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 USP28Q96RU2 1077 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 GMLQ99445 158 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 ALG1Q9BT22 464 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 SLC26A6Q9BXS9 759 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 ZNF277Q9NRM2 450 aaPredicted RBP10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 TCP11L1Q9NUJ3 509 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 RCOR1Q9UKL0 485 aa10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 BAZ2AQ9UIF9 1905 aaKnown RBP10.07□□□□□ -0.8
HMGN1P34-201ENST00000413023 hCG_1642624A0A1W2PR95 340 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 ERICH2A1L162 156 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 PPIP5K2O43314 1243 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 SLC3A2P08195 630 aaKnown RBP10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 PLCG2P16885 1265 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 C1QBPQ07021 282 aaKnown RBP10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 PDE4BQ07343 736 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 SSRP1Q08945 709 aaKnown RBP10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 PICALMQ13492 652 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 ZSCAN23Q3MJ62 389 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 CCDC93Q567U6 631 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 IFIT1BQ5T764 474 aaKnown RBP10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 SYNE3Q6ZMZ3 975 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 RTKN2Q8IZC4 609 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 SRBD1Q8N5C6 995 aaKnown RBP10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 NEDD1Q8NHV4 660 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 TEKT1Q969V4 418 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 CHMP4CQ96CF2 233 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 PRMT6Q96LA8 375 aaPredicted RBP10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 ZDHHC15Q96MV8 337 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 PSMD1Q99460 953 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 ZSCAN16Q9H4T2 348 aaPredicted RBP10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 FAM198AQ9UFP1 575 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 CLIC4Q9Y696 253 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 KIAA1551Q9HCM1 1747 aa10.06□□□□□ -0.8
HMGN1P34-201ENST00000413023 PSDA5PKW4 1024 aaPredicted RBP10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 TSPY2A6NKD2 308 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 PRPF3O43395 683 aaKnown RBP10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 XRCC6P12956 609 aaKnown RBP eCLIP10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 LIG1P18858 919 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 PTGER2P43116 358 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 NOVP48745 357 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 PRELPP51888 382 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 RCAN1P53805 252 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 ZNF445P59923 1031 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 TGFB2P61812 414 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 HDLBPQ00341 1268 aaKnown RBP10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 KIF23Q02241 960 aaPredicted RBP10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 CEBPZQ03701 1054 aaKnown RBP10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 SART3Q15020 963 aaKnown RBP10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 DGKHQ86XP1 1220 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 ZNF444Q8N0Y2 327 aaPredicted RBP10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 STAG2Q8N3U4 1231 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 SUPT20HQ8NEM7 779 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 TMEM47Q9BQJ4 181 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 MTFR1LQ9H019 292 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 MKNK2Q9HBH9 465 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 PIM2Q9P1W9 311 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 KCNJ14Q9UNX9 436 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 ATP6V1DQ9Y5K8 247 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 V9GY48 417 aaPredicted RBP10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 STK36Q9NRP7 1315 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 SCN9AQ15858 1988 aa10.05□□□□□ -0.8
HMGN1P34-201ENST00000413023 MYH2Q9UKX2 1941 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 DDTLA6NHG4 134 aaPredicted RBP10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 PSMD14O00487 310 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 RAD17O75943 681 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 DDAH1O94760 285 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 VIL1P09327 827 aaKnown RBP10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 SHMT1P34896 483 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 UBE2HP62256 183 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 KRT85P78386 507 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 JAG1P78504 1218 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 SHROOM1Q2M3G4 852 aaPredicted RBP10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 TMTC3Q6ZXV5 915 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 RASGRP2Q7LDG7 609 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 CATIPQ7Z7H3 387 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 IQCA1Q86XH1 822 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 CERS3Q8IU89 383 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 OSBPL5Q9H0X9 879 aaPredicted RBP10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 TDRD3Q9H7E2 651 aaKnown RBP10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 CCDC88AQ3V6T2 1871 aa10.04□□□□□ -0.8
HMGN1P34-201ENST00000413023 IGKV6D-41A0A0C4DH26 115 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 SHTN1A0MZ66 631 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 BTBD18B2RXH4 712 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 CDKL5O76039 1030 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 MBD3O95983 291 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 TSPY3P0CV98 308 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 TSPY8P0CW00 308 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 AKR1B1P15121 316 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 U2AF2P26368 475 aaKnown RBP eCLIP10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 TOB1P50616 345 aaPredicted RBP10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 CXCL9Q07325 125 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 TCP10Q12799 353 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms