RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 ASNSP08243 561 aa18.41■□□□□ 0.54
TRAPPC12-203ENST00000411973 CDK8P49336 464 aa18.41■□□□□ 0.54
TRAPPC12-203ENST00000411973 KIF23Q02241 960 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC12-203ENST00000411973 CERKLQ49MI3 558 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC12-203ENST00000411973 OTUD5Q96G74 571 aa18.41■□□□□ 0.54
TRAPPC12-203ENST00000411973 ZIC5Q96T25 663 aa18.41■□□□□ 0.54
TRAPPC12-203ENST00000411973 DSCC1Q9BVC3 393 aa18.41■□□□□ 0.54
TRAPPC12-203ENST00000411973 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
TRAPPC12-203ENST00000411973 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC12-203ENST00000411973 ANAPC4Q9UJX5 808 aa18.4■□□□□ 0.54
TRAPPC12-203ENST00000411973 KCNH4Q9UQ05 1017 aa18.4■□□□□ 0.54
TRAPPC12-203ENST00000411973 MANSC4A6NHS7 340 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 IRF6O14896 467 aa18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 GDF11O95390 407 aa18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 TM4SF4P48230 202 aa18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 JAG1P78504 1218 aa18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 PPARAQ07869 468 aa18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 MKRN3Q13064 507 aaKnown RBP18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 TBC1D2Q9BYX2 928 aa18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 ZBTB21Q9ULJ3 1066 aa18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 AFG3L2Q9Y4W6 797 aa18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 ZHX2Q9Y6X8 837 aa18.39■□□□□ 0.53
TRAPPC12-203ENST00000411973 USP17L5A8MUK1 530 aa18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 CXCL11O14625 94 aa18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 CDC45O75419 566 aa18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 SLC3A2P08195 630 aaKnown RBP18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 INHBEP58166 350 aa18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 ABCB5Q2M3G0 1257 aa18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 MS4A4AQ96JQ5 239 aa18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 CCDC17Q96LX7 622 aa18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 ESYT1Q9BSJ8 1104 aa18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 ZNF287Q9HBT7 754 aa18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 PTPRFP10586 1907 aa18.38■□□□□ 0.53
TRAPPC12-203ENST00000411973 LAMA4Q16363 1823 aa18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 TESPA1A2RU30 521 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 GH2P01242 217 aa18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 GTF2A2P52657 109 aa18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 MAP2K1Q02750 393 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 SREBF2Q12772 1141 aa18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 SNAPC2Q13487 334 aa18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 SHROOM1Q2M3G4 852 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 CASC1Q6TDU7 716 aa18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 WDR18Q9BV38 432 aa18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 CABP5Q9NP86 173 aa18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC12-203ENST00000411973 FGRP09769 529 aa18.36■□□□□ 0.53
TRAPPC12-203ENST00000411973 PDE4BQ07343 736 aa18.36■□□□□ 0.53
TRAPPC12-203ENST00000411973 GREB1LQ9C091 1923 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC12-203ENST00000411973 MKNK2Q9HBH9 465 aa18.36■□□□□ 0.53
TRAPPC12-203ENST00000411973 AS3MTQ9HBK9 375 aa18.36■□□□□ 0.53
TRAPPC12-203ENST00000411973 WBP1LQ9NX94 342 aa18.36■□□□□ 0.53
TRAPPC12-203ENST00000411973 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
TRAPPC12-203ENST00000411973 CETPP11597 493 aa18.35■□□□□ 0.53
TRAPPC12-203ENST00000411973 RASA1P20936 1047 aa18.35■□□□□ 0.53
TRAPPC12-203ENST00000411973 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
TRAPPC12-203ENST00000411973 TMEM179Q6ZVK1 233 aa18.35■□□□□ 0.53
TRAPPC12-203ENST00000411973 CCDC84Q86UT8 332 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC12-203ENST00000411973 ZNF280CQ8ND82 737 aa18.35■□□□□ 0.53
TRAPPC12-203ENST00000411973 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRAPPC12-203ENST00000411973 AKR1B1P15121 316 aa18.34■□□□□ 0.53
TRAPPC12-203ENST00000411973 PTH1RQ03431 593 aa18.34■□□□□ 0.53
TRAPPC12-203ENST00000411973 CTDSPL2Q05D32 466 aa18.34■□□□□ 0.53
TRAPPC12-203ENST00000411973 STK11IPQ8N1F8 1099 aa18.34■□□□□ 0.53
TRAPPC12-203ENST00000411973 MAP4K1Q92918 833 aa18.34■□□□□ 0.53
TRAPPC12-203ENST00000411973 CCL15-CCL14A0A0B4J2E2 113 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 A0A0G2JLL6 359 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 TRIM75PA6NK02 468 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 MPHOSPH10O00566 681 aaKnown RBP18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 ZNF213O14771 459 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 ORC4O43929 436 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 PCP11498 1178 aaKnown RBP18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 SPP2Q13103 211 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 SEPT2Q15019 361 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 RAB3GAP1Q15042 981 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 CCL15Q16663 113 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 KIAA1211Q6ZU35 1233 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 PRRT2Q7Z6L0 340 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 ZNF444Q8N0Y2 327 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 BRI3BPQ8WY22 251 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 PTPN18Q99952 460 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 LSG1Q9H089 658 aaKnown RBP18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 NBPF3Q9H094 633 aa18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC12-203ENST00000411973 PRDM1O75626 825 aa18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 BACE1P56817 501 aa18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 HAND2P61296 217 aa18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 MOGSQ13724 837 aa18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 IMMTQ16891 758 aaKnown RBP18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 SH3D19Q5HYK7 790 aa18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 IFNL1Q8IU54 200 aa18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 STAG1Q8WVM7 1258 aa18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 GTF3C3Q9Y5Q9 886 aa18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 TACC3Q9Y6A5 838 aa18.32■□□□□ 0.52
TRAPPC12-203ENST00000411973 PLIN4Q96Q06 1357 aa18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 C19orf81C9J6K1 198 aa18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 USP17L10C9JJH3 530 aa18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 IGF2BP3O00425 579 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 CA12O43570 354 aa18.31■□□□□ 0.52
TRAPPC12-203ENST00000411973 NT5C2P49902 561 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms