RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 ROBO3Q96MS0 1386 aa12.02□□□□□ -0.49
TTC39A-207ENST00000411642 LOC285556D6RIA3 1793 aa12.01□□□□□ -0.49
TTC39A-207ENST00000411642 PTPRAP18433 802 aa12.01□□□□□ -0.49
TTC39A-207ENST00000411642 PPATQ06203 517 aa12.01□□□□□ -0.49
TTC39A-207ENST00000411642 PPIL2Q13356 520 aa12.01□□□□□ -0.49
TTC39A-207ENST00000411642 C16orf86Q6ZW13 317 aa12.01□□□□□ -0.49
TTC39A-207ENST00000411642 CCDC84Q86UT8 332 aaPredicted RBP12.01□□□□□ -0.49
TTC39A-207ENST00000411642 IRF6O14896 467 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 GH2P01242 217 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 ASNSP08243 561 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 CDK8P49336 464 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 JAG1P78504 1218 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 PPARAQ07869 468 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 ALX1Q15699 326 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 SHROOM1Q2M3G4 852 aaPredicted RBP12□□□□□ -0.49
TTC39A-207ENST00000411642 CERKLQ49MI3 558 aaPredicted RBP12□□□□□ -0.49
TTC39A-207ENST00000411642 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 ZBTB21Q9ULJ3 1066 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 ZMYM6O95789 1325 aa12□□□□□ -0.49
TTC39A-207ENST00000411642 MANSC4A6NHS7 340 aaPredicted RBP11.99□□□□□ -0.49
TTC39A-207ENST00000411642 SGSM2O43147 1006 aa11.99□□□□□ -0.49
TTC39A-207ENST00000411642 FGAP02671 866 aa11.99□□□□□ -0.49
TTC39A-207ENST00000411642 GTF2A2P52657 109 aa11.99□□□□□ -0.49
TTC39A-207ENST00000411642 MAP2K1Q02750 393 aaPredicted RBP11.99□□□□□ -0.49
TTC39A-207ENST00000411642 SREBF2Q12772 1141 aa11.99□□□□□ -0.49
TTC39A-207ENST00000411642 ABCB5Q2M3G0 1257 aa11.99□□□□□ -0.49
TTC39A-207ENST00000411642 DSCC1Q9BVC3 393 aa11.99□□□□□ -0.49
TTC39A-207ENST00000411642 CABP5Q9NP86 173 aa11.99□□□□□ -0.49
TTC39A-207ENST00000411642 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
TTC39A-207ENST00000411642 ZHX2Q9Y6X8 837 aa11.99□□□□□ -0.49
TTC39A-207ENST00000411642 CCL15-CCL14A0A0B4J2E2 113 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 TRIM75PA6NK02 468 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 USP17L5A8MUK1 530 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 MPHOSPH10O00566 681 aaKnown RBP11.98□□□□□ -0.49
TTC39A-207ENST00000411642 CDC45O75419 566 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 SLC3A2P08195 630 aaKnown RBP11.98□□□□□ -0.49
TTC39A-207ENST00000411642 CTDSPL2Q05D32 466 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 SNAPC2Q13487 334 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 RAB3GAP1Q15042 981 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 CCL15Q16663 113 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 REM2Q8IYK8 340 aaPredicted RBP11.98□□□□□ -0.49
TTC39A-207ENST00000411642 MS4A4AQ96JQ5 239 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 MKNK2Q9HBH9 465 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 AS3MTQ9HBK9 375 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 ZNF287Q9HBT7 754 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 KCNH4Q9UQ05 1017 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 AFG3L2Q9Y4W6 797 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 CASP8AP2Q9UKL3 1982 aa11.98□□□□□ -0.49
TTC39A-207ENST00000411642 CXCL11O14625 94 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 PRDM1O75626 825 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 HSPA1AP0DMV8 641 aaKnown RBP11.97□□□□□ -0.49
TTC39A-207ENST00000411642 HSPA1BP0DMV9 641 aaKnown RBP11.97□□□□□ -0.49
TTC39A-207ENST00000411642 CETPP11597 493 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 AKR1B1P15121 316 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 RASA1P20936 1047 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 TM4SF4P48230 202 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 INHBEP58166 350 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 HAND2P61296 217 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 PDE4BQ07343 736 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 CASC1Q6TDU7 716 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 ZNF280CQ8ND82 737 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 BRI3BPQ8WY22 251 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 CCDC17Q96LX7 622 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 ESYT1Q9BSJ8 1104 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 BEGAINQ9BUH8 593 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 TBC1D2Q9BYX2 928 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 WBP1LQ9NX94 342 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 ANAPC4Q9UJX5 808 aa11.97□□□□□ -0.49
TTC39A-207ENST00000411642 TESPA1A2RU30 521 aaPredicted RBP11.96□□□□□ -0.49
TTC39A-207ENST00000411642 IGF2BP3O00425 579 aaKnown RBP eCLIP11.96□□□□□ -0.49
TTC39A-207ENST00000411642 GUCY1A2P33402 732 aa11.96□□□□□ -0.49
TTC39A-207ENST00000411642 SPP2Q13103 211 aa11.96□□□□□ -0.49
TTC39A-207ENST00000411642 SEPT2Q15019 361 aa11.96□□□□□ -0.49
TTC39A-207ENST00000411642 TMEM179Q6ZVK1 233 aa11.96□□□□□ -0.49
TTC39A-207ENST00000411642 WDR18Q9BV38 432 aa11.96□□□□□ -0.49
TTC39A-207ENST00000411642 A0A0G2JLL6 359 aaPredicted RBP11.95□□□□□ -0.5
TTC39A-207ENST00000411642 ZNF213O14771 459 aa11.95□□□□□ -0.5
TTC39A-207ENST00000411642 PTH1RQ03431 593 aa11.95□□□□□ -0.5
TTC39A-207ENST00000411642 MTMR2Q13614 643 aa11.95□□□□□ -0.5
TTC39A-207ENST00000411642 GADL1Q6ZQY3 521 aa11.95□□□□□ -0.5
TTC39A-207ENST00000411642 KIAA1211Q6ZU35 1233 aa11.95□□□□□ -0.5
TTC39A-207ENST00000411642 PRRT2Q7Z6L0 340 aaPredicted RBP11.95□□□□□ -0.5
TTC39A-207ENST00000411642 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
TTC39A-207ENST00000411642 CLEC10AQ8IUN9 316 aa11.95□□□□□ -0.5
TTC39A-207ENST00000411642 ZNF444Q8N0Y2 327 aaPredicted RBP11.95□□□□□ -0.5
TTC39A-207ENST00000411642 PTPN18Q99952 460 aa11.95□□□□□ -0.5
TTC39A-207ENST00000411642 CTNNA3Q9UI47 895 aa11.95□□□□□ -0.5
TTC39A-207ENST00000411642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
TTC39A-207ENST00000411642 PARP14Q460N5 1801 aa11.95□□□□□ -0.5
TTC39A-207ENST00000411642 PLIN4Q96Q06 1357 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 CA12O43570 354 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 TRPA1O75762 1119 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 HMGCS2P54868 508 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 BACE1P56817 501 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 ICA1Q05084 483 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 MOGSQ13724 837 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 IMMTQ16891 758 aaKnown RBP11.94□□□□□ -0.5
TTC39A-207ENST00000411642 AKNAD1Q5T1N1 836 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 OTUD7BQ6GQQ9 843 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms