RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 NACAP1Q9BZK3 213 aa28.53■■■□□ 2.16
UBE2E3-202ENST00000410062 MINDY4BA8MYZ0 360 aa28.52■■■□□ 2.16
UBE2E3-202ENST00000410062 FOXN1O15353 648 aa28.52■■■□□ 2.16
UBE2E3-202ENST00000410062 SBK1Q52WX2 424 aa28.52■■■□□ 2.16
UBE2E3-202ENST00000410062 PHIPQ8WWQ0 1821 aa28.52■■■□□ 2.16
UBE2E3-202ENST00000410062 CERKLQ49MI3 558 aaPredicted RBP28.51■■■□□ 2.15
UBE2E3-202ENST00000410062 CCL15-CCL14A0A0B4J2E2 113 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 INHBEP58166 350 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 SNAPC2Q13487 334 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 CCL15Q16663 113 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 NAPBQ9H115 298 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 RNF186Q9NXI6 227 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 TSKSQ9UJT2 592 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 AFG3L2Q9Y4W6 797 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 CCDC171Q6TFL3 1326 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 TRPA1O75762 1119 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 ASNSP08243 561 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 STK11IPQ8N1F8 1099 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 BRI3BPQ8WY22 251 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 PTPN18Q99952 460 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 SWAP70Q9UH65 585 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 ZBTB21Q9ULJ3 1066 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 KCNH4Q9UQ05 1017 aa28.5■■■□□ 2.15
UBE2E3-202ENST00000410062 TESPA1A2RU30 521 aaPredicted RBP28.49■■■□□ 2.15
UBE2E3-202ENST00000410062 IGF2BP3O00425 579 aaKnown RBP eCLIP28.49■■■□□ 2.15
UBE2E3-202ENST00000410062 GH2P01242 217 aa28.49■■■□□ 2.15
UBE2E3-202ENST00000410062 IFNL1Q8IU54 200 aa28.49■■■□□ 2.15
UBE2E3-202ENST00000410062 TRIM75PA6NK02 468 aa28.48■■■□□ 2.15
UBE2E3-202ENST00000410062 USP17L5A8MUK1 530 aa28.48■■■□□ 2.15
UBE2E3-202ENST00000410062 CDK8P49336 464 aa28.48■■■□□ 2.15
UBE2E3-202ENST00000410062 C16orf86Q6ZW13 317 aa28.48■■■□□ 2.15
UBE2E3-202ENST00000410062 MYH8P13535 1937 aa28.48■■■□□ 2.15
UBE2E3-202ENST00000410062 HSPD1P10809 573 aaKnown RBP28.47■■■□□ 2.15
UBE2E3-202ENST00000410062 CETPP11597 493 aa28.47■■■□□ 2.15
UBE2E3-202ENST00000410062 ABCB5Q2M3G0 1257 aa28.47■■■□□ 2.15
UBE2E3-202ENST00000410062 CA12O43570 354 aa28.46■■■□□ 2.15
UBE2E3-202ENST00000410062 CHMLP26374 656 aa28.46■■■□□ 2.15
UBE2E3-202ENST00000410062 MFAP1P55081 439 aaKnown RBP28.46■■■□□ 2.15
UBE2E3-202ENST00000410062 IL25Q9H293 177 aa28.46■■■□□ 2.15
UBE2E3-202ENST00000410062 CXCL11O14625 94 aa28.45■■■□□ 2.15
UBE2E3-202ENST00000410062 SPP2Q13103 211 aa28.45■■■□□ 2.15
UBE2E3-202ENST00000410062 GINM1Q9NU53 330 aa28.45■■■□□ 2.15
UBE2E3-202ENST00000410062 TAOK2Q9UL54 1235 aa28.45■■■□□ 2.15
UBE2E3-202ENST00000410062 MPHOSPH10O00566 681 aaKnown RBP28.45■■■□□ 2.14
UBE2E3-202ENST00000410062 ZNF280CQ8ND82 737 aa28.45■■■□□ 2.14
UBE2E3-202ENST00000410062 CABP5Q9NP86 173 aa28.45■■■□□ 2.14
UBE2E3-202ENST00000410062 SAGE1Q9NXZ1 904 aa28.45■■■□□ 2.14
UBE2E3-202ENST00000410062 ROBO3Q96MS0 1386 aa28.44■■■□□ 2.14
UBE2E3-202ENST00000410062 CTCFP49711 727 aaPredicted RBP28.44■■■□□ 2.14
UBE2E3-202ENST00000410062 RAB3GAP1Q15042 981 aa28.44■■■□□ 2.14
UBE2E3-202ENST00000410062 BMP2KLQ5H9B9 411 aa28.44■■■□□ 2.14
UBE2E3-202ENST00000410062 AS3MTQ9HBK9 375 aa28.44■■■□□ 2.14
UBE2E3-202ENST00000410062 PTPRFP10586 1907 aa28.43■■■□□ 2.14
UBE2E3-202ENST00000410062 A0A0G2JLL6 359 aaPredicted RBP28.43■■■□□ 2.14
UBE2E3-202ENST00000410062 FGAP02671 866 aa28.43■■■□□ 2.14
UBE2E3-202ENST00000410062 HSPA8P11142 646 aaKnown RBP28.43■■■□□ 2.14
UBE2E3-202ENST00000410062 PPARAQ07869 468 aa28.43■■■□□ 2.14
UBE2E3-202ENST00000410062 MOGSQ13724 837 aa28.43■■■□□ 2.14
UBE2E3-202ENST00000410062 ALX1Q15699 326 aa28.43■■■□□ 2.14
UBE2E3-202ENST00000410062 OTUD7BQ6GQQ9 843 aa28.43■■■□□ 2.14
UBE2E3-202ENST00000410062 PRRT2Q7Z6L0 340 aaPredicted RBP28.43■■■□□ 2.14
UBE2E3-202ENST00000410062 FAM43AQ8N2R8 423 aa28.43■■■□□ 2.14
UBE2E3-202ENST00000410062 BTBD19C9JJ37 291 aa28.42■■■□□ 2.14
UBE2E3-202ENST00000410062 TBC1D8O95759 1140 aa28.42■■■□□ 2.14
UBE2E3-202ENST00000410062 AKR1B1P15121 316 aa28.42■■■□□ 2.14
UBE2E3-202ENST00000410062 GUCY1A2P33402 732 aa28.42■■■□□ 2.14
UBE2E3-202ENST00000410062 TBC1D2Q9BYX2 928 aa28.42■■■□□ 2.14
UBE2E3-202ENST00000410062 ALDH1A1P00352 501 aa28.41■■■□□ 2.14
UBE2E3-202ENST00000410062 LBX1P52954 281 aa28.41■■■□□ 2.14
UBE2E3-202ENST00000410062 SEPT2Q15019 361 aa28.41■■■□□ 2.14
UBE2E3-202ENST00000410062 WDR18Q9BV38 432 aa28.41■■■□□ 2.14
UBE2E3-202ENST00000410062 MKNK2Q9HBH9 465 aa28.41■■■□□ 2.14
UBE2E3-202ENST00000410062 RUFY2Q8WXA3 655 aa28.41■■■□□ 2.14
UBE2E3-202ENST00000410062 PRDM1O75626 825 aa28.4■■■□□ 2.14
UBE2E3-202ENST00000410062 CTDSPL2Q05D32 466 aa28.4■■■□□ 2.14
UBE2E3-202ENST00000410062 DGKZQ13574 1117 aa28.4■■■□□ 2.14
UBE2E3-202ENST00000410062 GADL1Q6ZQY3 521 aa28.4■■■□□ 2.14
UBE2E3-202ENST00000410062 RASA1P20936 1047 aa28.39■■■□□ 2.14
UBE2E3-202ENST00000410062 MTMR2Q13614 643 aa28.39■■■□□ 2.14
UBE2E3-202ENST00000410062 CCDC17Q96LX7 622 aa28.39■■■□□ 2.14
UBE2E3-202ENST00000410062 R3HDMLQ9H3Y0 253 aa28.39■■■□□ 2.14
UBE2E3-202ENST00000410062 RAD50Q92878 1312 aa28.39■■■□□ 2.13
UBE2E3-202ENST00000410062 SLC3A2P08195 630 aaKnown RBP28.38■■■□□ 2.13
UBE2E3-202ENST00000410062 HMGCS2P54868 508 aa28.38■■■□□ 2.13
UBE2E3-202ENST00000410062 TMEM179Q6ZVK1 233 aa28.38■■■□□ 2.13
UBE2E3-202ENST00000410062 FASTKD5Q7L8L6 764 aaKnown RBP28.38■■■□□ 2.13
UBE2E3-202ENST00000410062 ZMYM6O95789 1325 aa28.38■■■□□ 2.13
UBE2E3-202ENST00000410062 BACE1P56817 501 aa28.37■■■□□ 2.13
UBE2E3-202ENST00000410062 GPAT2Q6NUI2 795 aa28.37■■■□□ 2.13
UBE2E3-202ENST00000410062 USP17L10C9JJH3 530 aa28.37■■■□□ 2.13
UBE2E3-202ENST00000410062 CRHR2Q13324 411 aa28.37■■■□□ 2.13
UBE2E3-202ENST00000410062 ANKRD23Q86SG2 305 aa28.37■■■□□ 2.13
UBE2E3-202ENST00000410062 CLEC10AQ8IUN9 316 aa28.37■■■□□ 2.13
UBE2E3-202ENST00000410062 ACER1Q8TDN7 264 aa28.37■■■□□ 2.13
UBE2E3-202ENST00000410062 ZNF287Q9HBT7 754 aa28.37■■■□□ 2.13
UBE2E3-202ENST00000410062 INCENPQ9NQS7 918 aa28.37■■■□□ 2.13
UBE2E3-202ENST00000410062 ANAPC4Q9UJX5 808 aa28.37■■■□□ 2.13
UBE2E3-202ENST00000410062 PDHXO00330 501 aa28.36■■■□□ 2.13
UBE2E3-202ENST00000410062 HAND2P61296 217 aa28.36■■■□□ 2.13
UBE2E3-202ENST00000410062 PDE4BQ07343 736 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms