RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CCDC81Q6ZN84 652 aa6.62□□□□□ -1.35
LSM5-205ENST00000409952 KRT26Q7Z3Y9 468 aa6.62□□□□□ -1.35
LSM5-205ENST00000409952 SLITRK4Q8IW52 837 aa6.62□□□□□ -1.35
LSM5-205ENST00000409952 PMM1Q92871 262 aa6.62□□□□□ -1.35
LSM5-205ENST00000409952 PCGF6Q9BYE7 350 aa6.62□□□□□ -1.35
LSM5-205ENST00000409952 HOMER2Q9NSB8 354 aa6.62□□□□□ -1.35
LSM5-205ENST00000409952 ACTR10Q9NZ32 417 aa6.62□□□□□ -1.35
LSM5-205ENST00000409952 MAPK8IP1Q9UQF2 711 aa6.62□□□□□ -1.35
LSM5-205ENST00000409952 LEMD3Q9Y2U8 911 aa6.62□□□□□ -1.35
LSM5-205ENST00000409952 MAOBP27338 520 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 CRKP46108 304 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 PREPP48147 710 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 EIF6P56537 245 aaKnown RBP6.61□□□□□ -1.35
LSM5-205ENST00000409952 CAMK2GQ13555 558 aaPredicted RBP6.61□□□□□ -1.35
LSM5-205ENST00000409952 TKFCQ3LXA3 575 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 SYNPOQ8N3V7 929 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 FAM169BQ8N8A8 192 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 GOLM1Q8NBJ4 401 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 OR6P1Q8NGX9 317 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 THAP3Q8WTV1 239 aaPredicted RBP6.61□□□□□ -1.35
LSM5-205ENST00000409952 SGSM3Q96HU1 749 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 C8orf48Q96LL4 319 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 PRDM16Q9HAZ2 1276 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 ST7Q9NRC1 585 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 PPT2Q9UMR5 302 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 HIF3AQ9Y2N7 669 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 RAXQ9Y2V3 346 aa6.61□□□□□ -1.35
LSM5-205ENST00000409952 ROBO2Q9HCK4 1378 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 DHX15O43143 795 aaKnown RBP6.6□□□□□ -1.35
LSM5-205ENST00000409952 TRIM37O94972 964 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 GIPRP48546 466 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 AP3B2Q13367 1082 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 POU4F3Q15319 338 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 TCEA2Q15560 299 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 FAM196AQ6ZSG2 479 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 TICAM2Q86XR7 235 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 FAM20CQ8IXL6 584 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 JMYQ8N9B5 988 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 DDX54Q8TDD1 881 aaKnown RBP6.6□□□□□ -1.35
LSM5-205ENST00000409952 USP26Q9BXU7 913 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 GSX1Q9H4S2 264 aaPredicted RBP6.6□□□□□ -1.35
LSM5-205ENST00000409952 TCEAL9Q9UHQ7 104 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 PLAAQ9Y263 795 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 TLR6Q9Y2C9 796 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 AKAP2Q9Y2D5 859 aa6.6□□□□□ -1.35
LSM5-205ENST00000409952 FBXO24O75426 580 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 ECEL1O95672 775 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 EXOSC10Q01780 885 aaKnown RBP6.59□□□□□ -1.35
LSM5-205ENST00000409952 FXNQ16595 210 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 MTERF2Q49AM1 385 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 SEZ6Q53EL9 994 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 NUTM2GQ5VZR2 741 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 DTHD1Q6ZMT9 781 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 PDZD3Q86UT5 571 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 UTP4Q969X6 686 aaKnown RBP6.59□□□□□ -1.35
LSM5-205ENST00000409952 RELTQ969Z4 430 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 CRBNQ96SW2 442 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 LRRC3Q9BY71 257 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 CEP44Q9C0F1 390 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 CYP4F12Q9HCS2 524 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 EID1Q9Y6B2 187 aa6.59□□□□□ -1.35
LSM5-205ENST00000409952 FSTP19883 344 aa6.58□□□□□ -1.36
LSM5-205ENST00000409952 RHBDL3P58872 404 aa6.58□□□□□ -1.36
LSM5-205ENST00000409952 SOX4Q06945 474 aaPredicted RBP6.58□□□□□ -1.36
LSM5-205ENST00000409952 HP1BP3Q5SSJ5 553 aaPredicted RBP6.58□□□□□ -1.36
LSM5-205ENST00000409952 ZMYM1Q5SVZ6 1142 aa6.58□□□□□ -1.36
LSM5-205ENST00000409952 FDX2Q6P4F2 183 aa6.58□□□□□ -1.36
LSM5-205ENST00000409952 TPTE2Q6XPS3 522 aa6.58□□□□□ -1.36
LSM5-205ENST00000409952 CLEC10AQ8IUN9 316 aa6.58□□□□□ -1.36
LSM5-205ENST00000409952 C2CD4AQ8NCU7 369 aaPredicted RBP6.58□□□□□ -1.36
LSM5-205ENST00000409952 FERD3LQ96RJ6 166 aa6.58□□□□□ -1.36
LSM5-205ENST00000409952 FAM83CQ9BQN1 747 aa6.58□□□□□ -1.36
LSM5-205ENST00000409952 TMEM39AQ9NV64 488 aa6.58□□□□□ -1.36
LSM5-205ENST00000409952 CACNA2D2Q9NY47 1150 aa6.58□□□□□ -1.36
LSM5-205ENST00000409952 THRAP3Q9Y2W1 955 aaKnown RBP6.58□□□□□ -1.36
LSM5-205ENST00000409952 CELA3AP09093 270 aa6.57□□□□□ -1.36
LSM5-205ENST00000409952 CNGA1P29973 690 aa6.57□□□□□ -1.36
LSM5-205ENST00000409952 DALRD3Q5D0E6 543 aaKnown RBP6.57□□□□□ -1.36
LSM5-205ENST00000409952 AGMOQ6ZNB7 445 aa6.57□□□□□ -1.36
LSM5-205ENST00000409952 EZH1Q92800 747 aaPredicted RBP6.57□□□□□ -1.36
LSM5-205ENST00000409952 NECAB3Q96P71 396 aaPredicted RBP6.57□□□□□ -1.36
LSM5-205ENST00000409952 C7orf69Q9H7B7 122 aa6.57□□□□□ -1.36
LSM5-205ENST00000409952 ATP8A1Q9Y2Q0 1164 aa6.57□□□□□ -1.36
LSM5-205ENST00000409952 PTCH2Q9Y6C5 1203 aa6.57□□□□□ -1.36
LSM5-205ENST00000409952 GSC2O15499 205 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 ASMTLO95671 621 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 ADH5P11766 374 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 BMP3P12645 472 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 TFE3P19532 575 aaPredicted RBP6.56□□□□□ -1.36
LSM5-205ENST00000409952 CDKN1CP49918 316 aaPredicted RBP6.56□□□□□ -1.36
LSM5-205ENST00000409952 RPS26P62854 115 aaKnown RBP6.56□□□□□ -1.36
LSM5-205ENST00000409952 SEPT6Q14141 434 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 FBXW10Q5XX13 1052 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 LARP1BQ659C4 914 aaKnown RBP6.56□□□□□ -1.36
LSM5-205ENST00000409952 CCSAPQ6IQ19 270 aaPredicted RBP6.56□□□□□ -1.36
LSM5-205ENST00000409952 TTBK2Q6IQ55 1244 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 CCDC84Q86UT8 332 aaPredicted RBP6.56□□□□□ -1.36
LSM5-205ENST00000409952 C12orf50Q8NA57 414 aaPredicted RBP6.56□□□□□ -1.36
LSM5-205ENST00000409952 CORO1BQ9BR76 489 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 KRT82Q9NSB4 513 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 212.7 ms