RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 RHOVQ96L33 236 aa8.47□□□□□ -1.05
LSM5-203ENST00000409782 EHD4Q9H223 541 aa8.47□□□□□ -1.05
LSM5-203ENST00000409782 SIRPGQ9P1W8 387 aa8.47□□□□□ -1.05
LSM5-203ENST00000409782 EIF3AQ14152 1382 aaKnown RBP8.47□□□□□ -1.05
LSM5-203ENST00000409782 PNPLA6Q8IY17 1366 aa8.47□□□□□ -1.05
LSM5-203ENST00000409782 SBNO2Q9Y2G9 1366 aa8.47□□□□□ -1.05
LSM5-203ENST00000409782 ARHGEF28Q8N1W1 1705 aaKnown RBP8.46□□□□□ -1.05
LSM5-203ENST00000409782 PXDNQ92626 1479 aa8.46□□□□□ -1.05
LSM5-203ENST00000409782 LOC102724428A0A0B4J2F2 783 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 K7ELQ4 463 aaPredicted RBP8.46□□□□□ -1.06
LSM5-203ENST00000409782 GHRHP01286 108 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 SSBP05455 408 aaKnown RBP eCLIP8.46□□□□□ -1.06
LSM5-203ENST00000409782 HOXB4P17483 251 aaPredicted RBP8.46□□□□□ -1.06
LSM5-203ENST00000409782 EIF2AK2P19525 551 aaKnown RBP8.46□□□□□ -1.06
LSM5-203ENST00000409782 EIF4A3P38919 411 aaKnown RBP8.46□□□□□ -1.06
LSM5-203ENST00000409782 SIK1P57059 783 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 HYAL2Q12891 473 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 BMS1Q14692 1282 aaKnown RBP8.46□□□□□ -1.06
LSM5-203ENST00000409782 CCDC85BQ15834 202 aaPredicted RBP8.46□□□□□ -1.06
LSM5-203ENST00000409782 LINC00114Q6XXX2 140 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 HFE2Q6ZVN8 426 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 JAZF1Q86VZ6 243 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 NUDT8Q8WV74 236 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 SPACA7Q96KW9 195 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 NSUN5Q96P11 429 aaKnown RBP8.46□□□□□ -1.06
LSM5-203ENST00000409782 BRINP2Q9C0B6 783 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 JPH1Q9HDC5 661 aaPredicted RBP8.46□□□□□ -1.06
LSM5-203ENST00000409782 PRDM6Q9NQX0 595 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 NAGPAQ9UK23 515 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 NPHP3Q7Z494 1330 aa8.46□□□□□ -1.06
LSM5-203ENST00000409782 COL22A1Q8NFW1 1626 aaPredicted RBP8.46□□□□□ -1.06
LSM5-203ENST00000409782 ENPP3O14638 875 aa8.45□□□□□ -1.06
LSM5-203ENST00000409782 PEAR1Q5VY43 1037 aaPredicted RBP8.45□□□□□ -1.06
LSM5-203ENST00000409782 C20orf204Q6ZNR8 217 aa8.45□□□□□ -1.06
LSM5-203ENST00000409782 LRRC59Q96AG4 307 aaKnown RBP8.45□□□□□ -1.06
LSM5-203ENST00000409782 PRAM1Q96QH2 718 aa8.45□□□□□ -1.06
LSM5-203ENST00000409782 ORAI2Q96SN7 254 aa8.45□□□□□ -1.06
LSM5-203ENST00000409782 ZNF408Q9H9D4 720 aa8.45□□□□□ -1.06
LSM5-203ENST00000409782 ABCB6Q9NP58 842 aa8.45□□□□□ -1.06
LSM5-203ENST00000409782 FRRS1LQ9P0K9 344 aa8.45□□□□□ -1.06
LSM5-203ENST00000409782 SALL4Q9UJQ4 1053 aa8.45□□□□□ -1.06
LSM5-203ENST00000409782 TULP4Q9NRJ4 1543 aa8.44□□□□□ -1.06
LSM5-203ENST00000409782 TMEM238LA0A1B0GVL6 79 aa8.44□□□□□ -1.06
LSM5-203ENST00000409782 J3QW42 95 aa8.44□□□□□ -1.06
LSM5-203ENST00000409782 NASPP49321 788 aaPredicted RBP8.44□□□□□ -1.06
LSM5-203ENST00000409782 KCNMA1Q12791 1236 aa8.44□□□□□ -1.06
LSM5-203ENST00000409782 PERM1Q5SV97 790 aa8.44□□□□□ -1.06
LSM5-203ENST00000409782 CEP44Q9C0F1 390 aa8.44□□□□□ -1.06
LSM5-203ENST00000409782 TMX1Q9H3N1 280 aa8.44□□□□□ -1.06
LSM5-203ENST00000409782 NOP53Q9NZM5 478 aaKnown RBP8.44□□□□□ -1.06
LSM5-203ENST00000409782 POGKQ9P215 609 aa8.44□□□□□ -1.06
LSM5-203ENST00000409782 SUPT16HQ9Y5B9 1047 aaKnown RBP8.44□□□□□ -1.06
LSM5-203ENST00000409782 SPDYE3A6NKU9 549 aa8.43□□□□□ -1.06
LSM5-203ENST00000409782 GREM1O60565 184 aa8.43□□□□□ -1.06
LSM5-203ENST00000409782 CLSTN1O94985 981 aa8.43□□□□□ -1.06
LSM5-203ENST00000409782 KIF4AO95239 1232 aa8.43□□□□□ -1.06
LSM5-203ENST00000409782 GBP2P32456 591 aaPredicted RBP8.43□□□□□ -1.06
LSM5-203ENST00000409782 MEX3CQ5U5Q3 659 aaKnown RBP8.43□□□□□ -1.06
LSM5-203ENST00000409782 NCAPG2Q86XI2 1143 aa8.43□□□□□ -1.06
LSM5-203ENST00000409782 PHC3Q8NDX5 983 aa8.43□□□□□ -1.06
LSM5-203ENST00000409782 ZNF296Q8WUU4 475 aaPredicted RBP8.43□□□□□ -1.06
LSM5-203ENST00000409782 DDX17Q92841 729 aaKnown RBP8.43□□□□□ -1.06
LSM5-203ENST00000409782 EAF1Q96JC9 268 aaPredicted RBP8.43□□□□□ -1.06
LSM5-203ENST00000409782 RGS17Q9UGC6 210 aaPredicted RBP8.43□□□□□ -1.06
LSM5-203ENST00000409782 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.43□□□□□ -1.06
LSM5-203ENST00000409782 USP32Q8NFA0 1604 aa8.43□□□□□ -1.06
LSM5-203ENST00000409782 KLF4O43474 513 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 GARTP22102 1010 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 FCGRTP55899 365 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 RASSF7Q02833 373 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 LMNB2Q03252 620 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 TCEAL1Q15170 157 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 C8orf86Q6ZUL3 223 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 CCNJLQ8IV13 435 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 TTC9Q92623 222 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 PLD4Q96BZ4 506 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 TCF12Q99081 682 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 LPIN3Q9BQK8 851 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
LSM5-203ENST00000409782 GINM1Q9NU53 330 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 EFR3BQ9Y2G0 817 aa8.42□□□□□ -1.06
LSM5-203ENST00000409782 ITSN1Q15811 1721 aa8.41□□□□□ -1.06
LSM5-203ENST00000409782 TRPM1Q7Z4N2 1603 aa8.41□□□□□ -1.06
LSM5-203ENST00000409782 TNS3Q68CZ2 1445 aa8.41□□□□□ -1.06
LSM5-203ENST00000409782 CYP2E1P05181 493 aaPredicted RBP8.41□□□□□ -1.06
LSM5-203ENST00000409782 RPS26P62854 115 aaKnown RBP8.41□□□□□ -1.06
LSM5-203ENST00000409782 RAB33AQ14088 237 aa8.41□□□□□ -1.06
LSM5-203ENST00000409782 SAFB2Q14151 953 aaKnown RBP eCLIP8.41□□□□□ -1.06
LSM5-203ENST00000409782 RPS26P11Q5JNZ5 115 aaPredicted RBP8.41□□□□□ -1.06
LSM5-203ENST00000409782 PLVAPQ9BX97 442 aa8.41□□□□□ -1.06
LSM5-203ENST00000409782 LRRC3Q9BY71 257 aa8.41□□□□□ -1.06
LSM5-203ENST00000409782 LIN7BQ9HAP6 207 aa8.41□□□□□ -1.06
LSM5-203ENST00000409782 ATP7BP35670 1465 aa8.4□□□□□ -1.06
LSM5-203ENST00000409782 ITPKAP23677 461 aa8.4□□□□□ -1.06
LSM5-203ENST00000409782 LIG3P49916 1009 aa8.4□□□□□ -1.06
LSM5-203ENST00000409782 AFF1P51825 1210 aaKnown RBP8.4□□□□□ -1.06
LSM5-203ENST00000409782 PCNX4Q63HM2 1172 aa8.4□□□□□ -1.06
LSM5-203ENST00000409782 ZNF772Q68DY9 489 aaPredicted RBP8.4□□□□□ -1.06
LSM5-203ENST00000409782 DTHD1Q6ZMT9 781 aa8.4□□□□□ -1.06
LSM5-203ENST00000409782 CCDC84Q86UT8 332 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms