RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 REC114Q7Z4M0 266 aa6.99□□□□□ -1.29
PMS1-203ENST00000409593 USP48Q86UV5 1035 aa6.99□□□□□ -1.29
PMS1-203ENST00000409593 PLD6Q8N2A8 252 aaKnown RBP6.99□□□□□ -1.29
PMS1-203ENST00000409593 MFSD2AQ8NA29 543 aa6.99□□□□□ -1.29
PMS1-203ENST00000409593 ZNF296Q8WUU4 475 aaPredicted RBP6.99□□□□□ -1.29
PMS1-203ENST00000409593 RNF34Q969K3 372 aa6.99□□□□□ -1.29
PMS1-203ENST00000409593 BSDC1Q9NW68 430 aaPredicted RBP6.99□□□□□ -1.29
PMS1-203ENST00000409593 ADAMTS1Q9UHI8 967 aa6.99□□□□□ -1.29
PMS1-203ENST00000409593 GTF2IRD1Q9UHL9 959 aa6.99□□□□□ -1.29
PMS1-203ENST00000409593 WNT11O96014 354 aa6.98□□□□□ -1.29
PMS1-203ENST00000409593 CST3P01034 146 aaPredicted RBP6.98□□□□□ -1.29
PMS1-203ENST00000409593 CAP2P40123 477 aa6.98□□□□□ -1.29
PMS1-203ENST00000409593 CWF19L2Q2TBE0 894 aaKnown RBP6.98□□□□□ -1.29
PMS1-203ENST00000409593 FAM13CQ8NE31 585 aa6.98□□□□□ -1.29
PMS1-203ENST00000409593 NETO1Q8TDF5 533 aa6.98□□□□□ -1.29
PMS1-203ENST00000409593 ACSF2Q96CM8 615 aaPredicted RBP6.98□□□□□ -1.29
PMS1-203ENST00000409593 HEXIM2Q96MH2 286 aaKnown RBP6.98□□□□□ -1.29
PMS1-203ENST00000409593 PRDM5Q9NQX1 630 aaPredicted RBP6.98□□□□□ -1.29
PMS1-203ENST00000409593 METTL5Q9NRN9 209 aaKnown RBP6.98□□□□□ -1.29
PMS1-203ENST00000409593 KLHL3Q9UH77 587 aa6.98□□□□□ -1.29
PMS1-203ENST00000409593 ADAM30Q9UKF2 790 aa6.98□□□□□ -1.29
PMS1-203ENST00000409593 PCDHGB7Q9Y5F8 929 aa6.98□□□□□ -1.29
PMS1-203ENST00000409593 UNCXA6NJT0 531 aa6.97□□□□□ -1.29
PMS1-203ENST00000409593 EOMESO95936 686 aa6.97□□□□□ -1.29
PMS1-203ENST00000409593 CEACAM5P06731 702 aa6.97□□□□□ -1.29
PMS1-203ENST00000409593 VAMP1P23763 118 aa6.97□□□□□ -1.29
PMS1-203ENST00000409593 ZNF394Q53GI3 561 aa6.97□□□□□ -1.29
PMS1-203ENST00000409593 SLC6A19Q695T7 634 aa6.97□□□□□ -1.29
PMS1-203ENST00000409593 LETMD1Q6P1Q0 360 aa6.97□□□□□ -1.29
PMS1-203ENST00000409593 VSIG10LQ86VR7 867 aa6.97□□□□□ -1.29
PMS1-203ENST00000409593 MRPL41Q8IXM3 137 aaKnown RBP6.97□□□□□ -1.29
PMS1-203ENST00000409593 PODXL2Q9NZ53 605 aa6.97□□□□□ -1.29
PMS1-203ENST00000409593 CCDC39Q9UFE4 941 aa6.97□□□□□ -1.29
PMS1-203ENST00000409593 POLR3KQ9Y2Y1 108 aaPredicted RBP6.97□□□□□ -1.29
PMS1-203ENST00000409593 GNAT3A8MTJ3 354 aa6.96□□□□□ -1.29
PMS1-203ENST00000409593 SCAMP3O14828 347 aaKnown RBP6.96□□□□□ -1.29
PMS1-203ENST00000409593 ADAMTS4O75173 837 aa6.96□□□□□ -1.29
PMS1-203ENST00000409593 KIAA0825Q8IV33 1275 aa6.96□□□□□ -1.29
PMS1-203ENST00000409593 SPON2Q9BUD6 331 aa6.96□□□□□ -1.29
PMS1-203ENST00000409593 KCNQ5Q9NR82 932 aa6.96□□□□□ -1.29
PMS1-203ENST00000409593 UBP1Q9NZI7 540 aa6.96□□□□□ -1.29
PMS1-203ENST00000409593 REV1Q9UBZ9 1251 aa6.96□□□□□ -1.29
PMS1-203ENST00000409593 HTR3BO95264 441 aa6.96□□□□□ -1.3
PMS1-203ENST00000409593 CRKP46108 304 aa6.96□□□□□ -1.3
PMS1-203ENST00000409593 GP2P55259 537 aaKnown RBP6.96□□□□□ -1.3
PMS1-203ENST00000409593 OXCT1P55809 520 aa6.96□□□□□ -1.3
PMS1-203ENST00000409593 APOBRQ0VD83 1088 aa6.96□□□□□ -1.3
PMS1-203ENST00000409593 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
PMS1-203ENST00000409593 MCATQ8IVS2 390 aaKnown RBP6.96□□□□□ -1.3
PMS1-203ENST00000409593 FLCNQ8NFG4 579 aa6.96□□□□□ -1.3
PMS1-203ENST00000409593 RIN3Q8TB24 985 aa6.96□□□□□ -1.3
PMS1-203ENST00000409593 KIAA1522Q9P206 1035 aaPredicted RBP6.96□□□□□ -1.3
PMS1-203ENST00000409593 GREM1O60565 184 aa6.95□□□□□ -1.3
PMS1-203ENST00000409593 YARSP54577 528 aaKnown RBP6.95□□□□□ -1.3
PMS1-203ENST00000409593 IFI16Q16666 785 aaKnown RBP6.95□□□□□ -1.3
PMS1-203ENST00000409593 SEZ6Q53EL9 994 aa6.95□□□□□ -1.3
PMS1-203ENST00000409593 ZNF746Q6NUN9 644 aaPredicted RBP6.95□□□□□ -1.3
PMS1-203ENST00000409593 CDH24Q86UP0 819 aa6.95□□□□□ -1.3
PMS1-203ENST00000409593 LRRC3Q9BY71 257 aa6.95□□□□□ -1.3
PMS1-203ENST00000409593 MKNK2Q9HBH9 465 aa6.95□□□□□ -1.3
PMS1-203ENST00000409593 BRMS1Q9HCU9 246 aa6.95□□□□□ -1.3
PMS1-203ENST00000409593 MAPK8IP1Q9UQF2 711 aa6.95□□□□□ -1.3
PMS1-203ENST00000409593 ROBO2Q9HCK4 1378 aa6.95□□□□□ -1.3
PMS1-203ENST00000409593 UPK3BL1B0FP48 263 aa6.94□□□□□ -1.3
PMS1-203ENST00000409593 UPK3BL2E5RIL1 263 aa6.94□□□□□ -1.3
PMS1-203ENST00000409593 PRNPP04156 253 aa6.94□□□□□ -1.3
PMS1-203ENST00000409593 MCM4P33991 863 aa6.94□□□□□ -1.3
PMS1-203ENST00000409593 SFRP5Q5T4F7 317 aa6.94□□□□□ -1.3
PMS1-203ENST00000409593 FAM214BQ7L5A3 538 aa6.94□□□□□ -1.3
PMS1-203ENST00000409593 TP53INP2Q8IXH6 220 aa6.94□□□□□ -1.3
PMS1-203ENST00000409593 KRTAP4-7Q9BYR0 210 aa6.94□□□□□ -1.3
PMS1-203ENST00000409593 PCDHB14Q9Y5E9 798 aa6.94□□□□□ -1.3
PMS1-203ENST00000409593 IGF2BP3O00425 579 aaKnown RBP eCLIP6.93□□□□□ -1.3
PMS1-203ENST00000409593 MLECQ14165 292 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 TMEM201Q5SNT2 666 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 PLAGL2Q9UPG8 496 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 SLC5A6Q9Y289 635 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 PRR36Q9H6K5 1346 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 CBX7O95931 251 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 BNIP3Q12983 259 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 C9orf131Q5VYM1 1079 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 ZNF574Q6ZN55 896 aaPredicted RBP6.93□□□□□ -1.3
PMS1-203ENST00000409593 GK5Q6ZS86 529 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 PHACTR4Q8IZ21 702 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 STK11IPQ8N1F8 1099 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 CYB5D2Q8WUJ1 264 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 NKD1Q969G9 470 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 HRASLS5Q96KN8 279 aa6.93□□□□□ -1.3
PMS1-203ENST00000409593 TMEM265A0A087WTH1 108 aa6.92□□□□□ -1.3
PMS1-203ENST00000409593 PRR33A8MZF0 331 aa6.92□□□□□ -1.3
PMS1-203ENST00000409593 FAM155AB1AL88 458 aaPredicted RBP6.92□□□□□ -1.3
PMS1-203ENST00000409593 CHURC1-FNTBB4DL54 471 aa6.92□□□□□ -1.3
PMS1-203ENST00000409593 CYP7A1P22680 504 aa6.92□□□□□ -1.3
PMS1-203ENST00000409593 TNNI2P48788 182 aa6.92□□□□□ -1.3
PMS1-203ENST00000409593 AOC3Q16853 763 aa6.92□□□□□ -1.3
PMS1-203ENST00000409593 MFSD4AQ8N468 514 aa6.92□□□□□ -1.3
PMS1-203ENST00000409593 BCL7CQ8WUZ0 217 aaPredicted RBP6.92□□□□□ -1.3
PMS1-203ENST00000409593 ZNF428Q96B54 188 aa6.92□□□□□ -1.3
PMS1-203ENST00000409593 MISP3Q96FF7 219 aa6.92□□□□□ -1.3
PMS1-203ENST00000409593 FBXL18Q96ME1 805 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms