RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 GORABQ5T7V8 394 aa20.83■□□□□ 0.93
SCRN1-203ENST00000409570 DNAJC18Q9H819 358 aa20.83■□□□□ 0.93
SCRN1-203ENST00000409570 TMOD4Q9NZQ9 345 aa20.83■□□□□ 0.93
SCRN1-203ENST00000409570 UNC80Q8N2C7 3258 aa20.83■□□□□ 0.92
SCRN1-203ENST00000409570 GNAI3P08754 354 aa20.82■□□□□ 0.92
SCRN1-203ENST00000409570 COL6A1P12109 1028 aa20.82■□□□□ 0.92
SCRN1-203ENST00000409570 SHROOM1Q2M3G4 852 aaPredicted RBP20.82■□□□□ 0.92
SCRN1-203ENST00000409570 GPRC5AQ8NFJ5 357 aa20.82■□□□□ 0.92
SCRN1-203ENST00000409570 SOCS4Q8WXH5 440 aa20.82■□□□□ 0.92
SCRN1-203ENST00000409570 USP6NLQ92738 828 aa20.82■□□□□ 0.92
SCRN1-203ENST00000409570 DHX36Q9H2U1 1008 aaKnown RBP20.82■□□□□ 0.92
SCRN1-203ENST00000409570 MTMR10Q9NXD2 777 aa20.82■□□□□ 0.92
SCRN1-203ENST00000409570 LRP2BPQ9P2M1 347 aa20.82■□□□□ 0.92
SCRN1-203ENST00000409570 RBPJLQ9UBG7 517 aa20.82■□□□□ 0.92
SCRN1-203ENST00000409570 STXBP5LQ9Y2K9 1186 aa20.82■□□□□ 0.92
SCRN1-203ENST00000409570 LAMA2P24043 3122 aaKnown RBP20.81■□□□□ 0.92
SCRN1-203ENST00000409570 C19orf81C9J6K1 198 aa20.81■□□□□ 0.92
SCRN1-203ENST00000409570 CACNB2Q08289 660 aaPredicted RBP20.81■□□□□ 0.92
SCRN1-203ENST00000409570 Q3C1V9 767 aa20.81■□□□□ 0.92
SCRN1-203ENST00000409570 METTL16Q86W50 562 aaKnown RBP20.81■□□□□ 0.92
SCRN1-203ENST00000409570 UBE2OQ9C0C9 1292 aaKnown RBP20.81■□□□□ 0.92
SCRN1-203ENST00000409570 AATFQ9NY61 560 aaKnown RBP eCLIP20.81■□□□□ 0.92
SCRN1-203ENST00000409570 ZKSCAN1P17029 563 aaPredicted RBP20.8■□□□□ 0.92
SCRN1-203ENST00000409570 MAPK4P31152 587 aa20.8■□□□□ 0.92
SCRN1-203ENST00000409570 LHX8Q68G74 356 aa20.8■□□□□ 0.92
SCRN1-203ENST00000409570 POTEEQ6S8J3 1075 aa20.8■□□□□ 0.92
SCRN1-203ENST00000409570 TRMT44Q8IYL2 757 aaKnown RBP20.8■□□□□ 0.92
SCRN1-203ENST00000409570 PORCNQ9H237 461 aa20.8■□□□□ 0.92
SCRN1-203ENST00000409570 USP17L10C9JJH3 530 aa20.79■□□□□ 0.92
SCRN1-203ENST00000409570 UQCRFS1P1P0C7P4 283 aa20.79■□□□□ 0.92
SCRN1-203ENST00000409570 CCND3P30281 292 aaPredicted RBP20.79■□□□□ 0.92
SCRN1-203ENST00000409570 PPP4CP60510 307 aa20.79■□□□□ 0.92
SCRN1-203ENST00000409570 ERVK-9P63128 1117 aa20.79■□□□□ 0.92
SCRN1-203ENST00000409570 ERVK-24P63145 666 aa20.79■□□□□ 0.92
SCRN1-203ENST00000409570 PDE3AQ14432 1141 aa20.79■□□□□ 0.92
SCRN1-203ENST00000409570 CCL14Q16627 93 aa20.79■□□□□ 0.92
SCRN1-203ENST00000409570 MORN1Q5T089 497 aa20.79■□□□□ 0.92
SCRN1-203ENST00000409570 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
SCRN1-203ENST00000409570 FOXP4Q8IVH2 680 aaPredicted RBP20.79■□□□□ 0.92
SCRN1-203ENST00000409570 MAPKAPK5Q8IW41 473 aa20.79■□□□□ 0.92
SCRN1-203ENST00000409570 TGFBRAP1Q8WUH2 860 aa20.79■□□□□ 0.92
SCRN1-203ENST00000409570 NOL10Q9BSC4 688 aaKnown RBP20.79■□□□□ 0.92
SCRN1-203ENST00000409570 FLT1P17948 1338 aa20.78■□□□□ 0.92
SCRN1-203ENST00000409570 GDF11O95390 407 aa20.78■□□□□ 0.92
SCRN1-203ENST00000409570 BAG3O95817 575 aa20.78■□□□□ 0.92
SCRN1-203ENST00000409570 RARSP54136 660 aaKnown RBP20.78■□□□□ 0.92
SCRN1-203ENST00000409570 LRRC26Q2I0M4 334 aa20.78■□□□□ 0.92
SCRN1-203ENST00000409570 GPR142Q7Z601 462 aa20.78■□□□□ 0.92
SCRN1-203ENST00000409570 ADGRA1Q86SQ6 560 aa20.78■□□□□ 0.92
SCRN1-203ENST00000409570 ARHGAP45Q92619 1136 aa20.78■□□□□ 0.92
SCRN1-203ENST00000409570 GINM1Q9NU53 330 aa20.78■□□□□ 0.92
SCRN1-203ENST00000409570 ZBTB21Q9ULJ3 1066 aa20.78■□□□□ 0.92
SCRN1-203ENST00000409570 PNMA6EA0A0J9YXQ4 647 aa20.77■□□□□ 0.92
SCRN1-203ENST00000409570 PLCG2P16885 1265 aa20.77■□□□□ 0.92
SCRN1-203ENST00000409570 RGS2P41220 211 aa20.77■□□□□ 0.92
SCRN1-203ENST00000409570 PAGR1Q9BTK6 254 aa20.77■□□□□ 0.92
SCRN1-203ENST00000409570 SNRKQ9NRH2 765 aa20.77■□□□□ 0.92
SCRN1-203ENST00000409570 EMILIN3Q9NT22 766 aa20.77■□□□□ 0.92
SCRN1-203ENST00000409570 PALD1Q9ULE6 856 aa20.77■□□□□ 0.92
SCRN1-203ENST00000409570 G3BP1Q13283 466 aaKnown RBP eCLIP20.76■□□□□ 0.91
SCRN1-203ENST00000409570 PLEKHH3Q7Z736 793 aa20.76■□□□□ 0.91
SCRN1-203ENST00000409570 CRACR2BQ8N4Y2 399 aaPredicted RBP20.76■□□□□ 0.91
SCRN1-203ENST00000409570 GTF3C2Q8WUA4 911 aaPredicted RBP20.76■□□□□ 0.91
SCRN1-203ENST00000409570 APBA2Q99767 749 aa20.76■□□□□ 0.91
SCRN1-203ENST00000409570 MDM2Q00987 491 aaPredicted RBP20.75■□□□□ 0.91
SCRN1-203ENST00000409570 USP17L2Q6R6M4 530 aa20.75■□□□□ 0.91
SCRN1-203ENST00000409570 CCAR1Q8IX12 1150 aaKnown RBP20.75■□□□□ 0.91
SCRN1-203ENST00000409570 TRIM34Q9BYJ4 488 aa20.75■□□□□ 0.91
SCRN1-203ENST00000409570 GNAI2P04899 355 aa20.74■□□□□ 0.91
SCRN1-203ENST00000409570 CYP2E1P05181 493 aaPredicted RBP20.74■□□□□ 0.91
SCRN1-203ENST00000409570 SAP30BPQ9UHR5 308 aaKnown RBP20.74■□□□□ 0.91
SCRN1-203ENST00000409570 RLFQ13129 1914 aa20.74■□□□□ 0.91
SCRN1-203ENST00000409570 LTBP2Q14767 1821 aa20.74■□□□□ 0.91
SCRN1-203ENST00000409570 CNMDO75829 334 aa20.73■□□□□ 0.91
SCRN1-203ENST00000409570 MAP2K5Q13163 448 aa20.73■□□□□ 0.91
SCRN1-203ENST00000409570 TTC39AQ5SRH9 613 aa20.73■□□□□ 0.91
SCRN1-203ENST00000409570 DBNDD2Q9BQY9 259 aa20.73■□□□□ 0.91
SCRN1-203ENST00000409570 TNNQ9UQP3 1299 aa20.73■□□□□ 0.91
SCRN1-203ENST00000409570 TNNI3KQ59H18 835 aa20.72■□□□□ 0.91
SCRN1-203ENST00000409570 C12orf42Q96LP6 360 aa20.72■□□□□ 0.91
SCRN1-203ENST00000409570 GPR108Q9NPR9 543 aa20.72■□□□□ 0.91
SCRN1-203ENST00000409570 FLRT1Q9NZU1 646 aa20.72■□□□□ 0.91
SCRN1-203ENST00000409570 RABGAP1Q9Y3P9 1069 aa20.72■□□□□ 0.91
SCRN1-203ENST00000409570 FPGT-TNNI3KV9GXZ4 949 aa20.72■□□□□ 0.91
SCRN1-203ENST00000409570 GH2P01242 217 aa20.71■□□□□ 0.91
SCRN1-203ENST00000409570 HLA-DOAP06340 250 aa20.71■□□□□ 0.91
SCRN1-203ENST00000409570 DYNLL1P63167 89 aaKnown RBP20.71■□□□□ 0.91
SCRN1-203ENST00000409570 EDC3Q96F86 508 aaKnown RBP20.71■□□□□ 0.91
SCRN1-203ENST00000409570 NDUFB9Q9Y6M9 179 aa20.71■□□□□ 0.91
SCRN1-203ENST00000409570 POTEB2H3BUK9 544 aa20.7■□□□□ 0.9
SCRN1-203ENST00000409570 TRIM27P14373 513 aa20.7■□□□□ 0.9
SCRN1-203ENST00000409570 ZYXQ15942 572 aaKnown RBP20.7■□□□□ 0.9
SCRN1-203ENST00000409570 CCDC158Q5M9N0 1113 aa20.7■□□□□ 0.9
SCRN1-203ENST00000409570 FAM109BQ6ICB4 259 aaPredicted RBP20.7■□□□□ 0.9
SCRN1-203ENST00000409570 SENP6Q9GZR1 1112 aaPredicted RBP20.7■□□□□ 0.9
SCRN1-203ENST00000409570 CWC22Q9HCG8 908 aaKnown RBP20.7■□□□□ 0.9
SCRN1-203ENST00000409570 PIH1D3Q9NQM4 214 aaKnown RBP20.7■□□□□ 0.9
SCRN1-203ENST00000409570 USP17L15C9J2P7 530 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 USP17L13C9JLJ4 530 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 USP17L11C9JVI0 530 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms