RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SAGE1Q9NXZ1 904 aa19.62■□□□□ 0.73
TSPAN4-208ENST00000409531 SAP30BPQ9UHR5 308 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-208ENST00000409531 TAOK2Q9UL54 1235 aa19.62■□□□□ 0.73
TSPAN4-208ENST00000409531 MYH8P13535 1937 aa19.62■□□□□ 0.73
TSPAN4-208ENST00000409531 TRPA1O75762 1119 aa19.61■□□□□ 0.73
TSPAN4-208ENST00000409531 SLC3A2P08195 630 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-208ENST00000409531 NECTIN1Q15223 517 aa19.61■□□□□ 0.73
TSPAN4-208ENST00000409531 C12orf60Q5U649 245 aa19.61■□□□□ 0.73
TSPAN4-208ENST00000409531 ERO1BQ86YB8 467 aa19.61■□□□□ 0.73
TSPAN4-208ENST00000409531 PALD1Q9ULE6 856 aa19.61■□□□□ 0.73
TSPAN4-208ENST00000409531 SNCAIPQ9Y6H5 919 aa19.61■□□□□ 0.73
TSPAN4-208ENST00000409531 SPDYE5A6NIY4 337 aa19.6■□□□□ 0.73
TSPAN4-208ENST00000409531 PHF20L1A8MW92 1017 aa19.6■□□□□ 0.73
TSPAN4-208ENST00000409531 MINDY4BA8MYZ0 360 aa19.6■□□□□ 0.73
TSPAN4-208ENST00000409531 ZKSCAN1P17029 563 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-208ENST00000409531 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
TSPAN4-208ENST00000409531 ABHD8Q96I13 439 aa19.6■□□□□ 0.73
TSPAN4-208ENST00000409531 PI4KBQ9UBF8 816 aa19.6■□□□□ 0.73
TSPAN4-208ENST00000409531 TSKSQ9UJT2 592 aa19.6■□□□□ 0.73
TSPAN4-208ENST00000409531 ANAPC4Q9UJX5 808 aa19.6■□□□□ 0.73
TSPAN4-208ENST00000409531 HSPA4P34932 840 aa19.59■□□□□ 0.73
TSPAN4-208ENST00000409531 PPARAQ07869 468 aa19.59■□□□□ 0.73
TSPAN4-208ENST00000409531 OTUD5Q96G74 571 aa19.59■□□□□ 0.73
TSPAN4-208ENST00000409531 EHD4Q9H223 541 aa19.59■□□□□ 0.73
TSPAN4-208ENST00000409531 ROBO3Q96MS0 1386 aa19.59■□□□□ 0.73
TSPAN4-208ENST00000409531 PCP11498 1178 aaKnown RBP19.58■□□□□ 0.73
TSPAN4-208ENST00000409531 PPATQ06203 517 aa19.58■□□□□ 0.73
TSPAN4-208ENST00000409531 NOL9Q5SY16 702 aaKnown RBP19.58■□□□□ 0.73
TSPAN4-208ENST00000409531 CREB3L3Q68CJ9 461 aa19.58■□□□□ 0.73
TSPAN4-208ENST00000409531 FOXP4Q8IVH2 680 aaPredicted RBP19.58■□□□□ 0.73
TSPAN4-208ENST00000409531 MS4A4AQ96JQ5 239 aa19.58■□□□□ 0.73
TSPAN4-208ENST00000409531 TRIM34Q9BYJ4 488 aa19.58■□□□□ 0.73
TSPAN4-208ENST00000409531 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.58■□□□□ 0.732e-8■■■■■ 42.5
TSPAN4-208ENST00000409531 ZNF287Q9HBT7 754 aa19.58■□□□□ 0.73
TSPAN4-208ENST00000409531 SERPINB13Q9UIV8 391 aa19.58■□□□□ 0.73
TSPAN4-208ENST00000409531 SIPA1L1O43166 1804 aa19.58■□□□□ 0.72
TSPAN4-208ENST00000409531 TESPA1A2RU30 521 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 SLC27A2O14975 620 aa19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 CTNND1O60716 968 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 CYP21A2P08686 494 aa19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 SLURP2P0DP57 97 aa19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 PLCD1P51178 756 aa19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 GTF2A2P52657 109 aa19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 HAND2P61296 217 aa19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 PDE4BQ07343 736 aa19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 IFNL1Q8IU54 200 aa19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 CRACR2BQ8N4Y2 399 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 RNF41Q9H4P4 317 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 HERC5Q9UII4 1024 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-208ENST00000409531 CYP2D7A0A087X1C5 515 aa19.56■□□□□ 0.72
TSPAN4-208ENST00000409531 ALDH1A1P00352 501 aa19.56■□□□□ 0.72
TSPAN4-208ENST00000409531 CYP2D6P10635 497 aa19.56■□□□□ 0.72
TSPAN4-208ENST00000409531 PPIL2Q13356 520 aa19.56■□□□□ 0.72
TSPAN4-208ENST00000409531 KRT32Q14532 448 aa19.56■□□□□ 0.72
TSPAN4-208ENST00000409531 SLC4A8Q2Y0W8 1093 aa19.56■□□□□ 0.72
TSPAN4-208ENST00000409531 OTUD7BQ6GQQ9 843 aa19.56■□□□□ 0.72
TSPAN4-208ENST00000409531 SCYL3Q8IZE3 742 aa19.56■□□□□ 0.72
TSPAN4-208ENST00000409531 C22orf23Q9BZE7 217 aa19.56■□□□□ 0.72
TSPAN4-208ENST00000409531 SWAP70Q9UH65 585 aa19.56■□□□□ 0.72
TSPAN4-208ENST00000409531 IRF6O14896 467 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 NT5C2P49902 561 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 ANAPC15P60006 121 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 CTDSPL2Q05D32 466 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 TSGA10IPQ3SY00 556 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 AKNAD1Q5T1N1 836 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 MFSD6Q6ZSS7 791 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 C16orf86Q6ZW13 317 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 METTL16Q86W50 562 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 STAG1Q8WVM7 1258 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 KCNB2Q92953 911 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 CNNM2Q9H8M5 875 aa19.55■□□□□ 0.72
TSPAN4-208ENST00000409531 FAM196BA6NMK8 535 aa19.54■□□□□ 0.72
TSPAN4-208ENST00000409531 TRDNQ13061 729 aa19.54■□□□□ 0.72
TSPAN4-208ENST00000409531 PTPN18Q99952 460 aa19.54■□□□□ 0.72
TSPAN4-208ENST00000409531 PICK1Q9NRD5 415 aa19.54■□□□□ 0.72
TSPAN4-208ENST00000409531 OTOFQ9HC10 1997 aa19.54■□□□□ 0.72
TSPAN4-208ENST00000409531 CCL15-CCL14A0A0B4J2E2 113 aa19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 IGF2BP3O00425 579 aaKnown RBP eCLIP19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 TBC1D8O95759 1140 aa19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 CETPP11597 493 aa19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 RBM25P49756 843 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 GABPAQ06546 454 aa19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 SNAPC2Q13487 334 aa19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 CCL15Q16663 113 aa19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 BRI3BPQ8WY22 251 aa19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 CFHR5Q9BXR6 569 aa19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 MKNK2Q9HBH9 465 aa19.53■□□□□ 0.72
TSPAN4-208ENST00000409531 PTPRAP18433 802 aa19.52■□□□□ 0.72
TSPAN4-208ENST00000409531 TBC1D10CQ8IV04 446 aa19.52■□□□□ 0.72
TSPAN4-208ENST00000409531 DYNLL2Q96FJ2 89 aa19.52■□□□□ 0.72
TSPAN4-208ENST00000409531 TBC1D32Q96NH3 1257 aa19.52■□□□□ 0.72
TSPAN4-208ENST00000409531 KRT23Q9C075 422 aa19.52■□□□□ 0.72
TSPAN4-208ENST00000409531 NBPF3Q9H094 633 aa19.52■□□□□ 0.72
TSPAN4-208ENST00000409531 KCNH4Q9UQ05 1017 aa19.52■□□□□ 0.72
TSPAN4-208ENST00000409531 SNX14Q9Y5W7 946 aa19.52■□□□□ 0.72
TSPAN4-208ENST00000409531 ZHX2Q9Y6X8 837 aa19.52■□□□□ 0.72
TSPAN4-208ENST00000409531 CCDC85CA6NKD9 419 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 E7EWF7 191 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 CXCL11O14625 94 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 ORC4O43929 436 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms