RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 ANKARQ7Z5J8 1434 aa18.58■□□□□ 0.57
PTPRN2-205ENST00000409483 CIAO1O76071 339 aa18.58■□□□□ 0.57
PTPRN2-205ENST00000409483 TTLL11Q8NHH1 800 aa18.58■□□□□ 0.57
PTPRN2-205ENST00000409483 WDR66Q8TBY9 1149 aa18.58■□□□□ 0.57
PTPRN2-205ENST00000409483 TRAF5O00463 557 aa18.58■□□□□ 0.56
PTPRN2-205ENST00000409483 CCDC122Q5T0U0 273 aa18.58■□□□□ 0.56
PTPRN2-205ENST00000409483 GRAMD1CQ8IYS0 662 aa18.58■□□□□ 0.56
PTPRN2-205ENST00000409483 CSGALNACT2Q8N6G5 542 aa18.58■□□□□ 0.56
PTPRN2-205ENST00000409483 PCDHA5Q9Y5H7 936 aa18.58■□□□□ 0.56
PTPRN2-205ENST00000409483 SETBP1Q9Y6X0 1596 aa18.58■□□□□ 0.56
PTPRN2-205ENST00000409483 GTF2IP78347 998 aa18.58■□□□□ 0.56
PTPRN2-205ENST00000409483 SP4Q02446 784 aa18.58■□□□□ 0.56
PTPRN2-205ENST00000409483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.58■□□□□ 0.568e-25■■■■■ 596.2
PTPRN2-205ENST00000409483 ZNF500O60304 480 aaPredicted RBP18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 ADD2P35612 726 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 MCAMP43121 646 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 GPR108Q9NPR9 543 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 MFSD14BQ5SR56 506 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 CNGA4Q8IV77 575 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 CCDC94Q9BW85 323 aaPredicted RBP18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 CMA1P23946 247 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 KRT9P35527 623 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 NOC4LQ9BVI4 516 aaKnown RBP18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 BCL2L12Q9HB09 334 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 CHMP2AO43633 222 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 GOLGA1Q92805 767 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 ZSWIM5Q9P217 1185 aa18.57■□□□□ 0.56
PTPRN2-205ENST00000409483 IFFO1Q0D2I5 559 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 LRRC27Q9C0I9 530 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 NBPF26B4DH59 902 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 KRT86O43790 486 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 RASGRF1Q13972 1273 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 NBPF14Q5TI25 921 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 NBPF10Q6P3W6 841 aaKnown RBP18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 SV2BQ7L1I2 683 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 NBPF15Q8N660 670 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 RASGRP4Q8TDF6 673 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 PSMB7Q99436 277 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 CDC25AP30304 524 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 PAK1Q13153 545 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 INF2Q27J81 1249 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 RBM17Q96I25 401 aaKnown RBP18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 PARP3Q9Y6F1 533 aa18.56■□□□□ 0.56
PTPRN2-205ENST00000409483 IL6STP40189 918 aaPredicted RBP18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 TTC14Q96N46 770 aa18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 BIN2Q9UBW5 565 aaPredicted RBP18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 RESTQ13127 1097 aa18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 DCAF17Q5H9S7 520 aaPredicted RBP18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 MAATS1Q7Z4T9 603 aa18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 PNMA1Q8ND90 353 aa18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 RNASE9P60153 205 aaKnown RBP18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 ERFEQ4G0M1 354 aa18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 SUSD4Q5VX71 490 aa18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 SMYD4Q8IYR2 804 aaPredicted RBP18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 SLF1Q9BQI6 1058 aa18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 USP21Q9UK80 565 aa18.55■□□□□ 0.56
PTPRN2-205ENST00000409483 TTLL12Q14166 644 aaPredicted RBP18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 CACTINQ8WUQ7 758 aaKnown RBP18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 RTEL1Q9NZ71 1219 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 BICDL2A1A5D9 508 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 TACC1O75410 805 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 CETN1Q12798 172 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 EHBP1Q8NDI1 1231 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 TAF6LQ9Y6J9 622 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 NEXMIFQ5QGS0 1516 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 SCNN1DP51172 638 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 USH1GQ495M9 461 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 KRBA2Q6ZNG9 492 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 SCLT1Q96NL6 688 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 LRWD1Q9UFC0 647 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 KIF23Q02241 960 aaPredicted RBP18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 PPP2R3AQ06190 1150 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 SCARF1Q14162 830 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 NONOQ15233 471 aaKnown RBP eCLIP18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 LRRC8AQ8IWT6 810 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 LINC00301Q8NCQ3 95 aa18.54■□□□□ 0.56
PTPRN2-205ENST00000409483 FRMPD2Q68DX3 1309 aaPredicted RBP18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 PLCD1P51178 756 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 KRT83P78385 493 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 PPARDQ03181 441 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 DNAJC21Q5F1R6 531 aaKnown RBP18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 ERO1AQ96HE7 468 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 EYA3Q99504 573 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 LMTK2Q8IWU2 1503 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 PTGDRQ13258 359 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 RAPGEF1Q13905 1077 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 MSL1Q68DK7 614 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 SNX29Q8TEQ0 813 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 NELFBQ8WX92 580 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 EHMT1Q9H9B1 1298 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 RCOR1Q9UKL0 485 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 SPATA31A3Q5VYP0 1347 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 POTEB2H3BUK9 544 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 RDXP35241 583 aaKnown RBP18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 SLC39A14Q15043 492 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 NELFCDQ8IXH7 590 aa18.53■□□□□ 0.56
PTPRN2-205ENST00000409483 SRRTQ9BXP5 876 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms