RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.97■■□□□ 1.43
USP39-203ENST00000409470 ZC3H12CQ9C0D7 883 aaKnown RBP23.97■■□□□ 1.43
USP39-203ENST00000409470 COA1Q9GZY4 146 aa23.97■■□□□ 1.43
USP39-203ENST00000409470 DLEC1Q9Y238 1755 aa23.97■■□□□ 1.43
USP39-203ENST00000409470 GPR75-ASB3A0A0A6YYF3 556 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 GTF2IP78347 998 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 FAM160A1Q05DH4 1040 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 TYRO3Q06418 890 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 RBM43Q6ZSC3 357 aaKnown RBP23.96■■□□□ 1.43
USP39-203ENST00000409470 MRPS27Q92552 414 aaKnown RBP23.96■■□□□ 1.43
USP39-203ENST00000409470 RNF26Q9BY78 433 aaPredicted RBP23.96■■□□□ 1.43
USP39-203ENST00000409470 FAM205AQ6ZU69 1335 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 MMP1P03956 469 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 PLCG2P16885 1265 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 TROAPQ12815 778 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 OLFM4Q6UX06 510 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 DPP8Q6V1X1 898 aaPredicted RBP23.96■■□□□ 1.43
USP39-203ENST00000409470 FBXW7Q969H0 707 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 DYNLL2Q96FJ2 89 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 MKNK2Q9HBH9 465 aa23.96■■□□□ 1.43
USP39-203ENST00000409470 A0A1W2PQ27 194 aa23.95■■□□□ 1.42
USP39-203ENST00000409470 A0A1W2PQ64 194 aa23.95■■□□□ 1.42
USP39-203ENST00000409470 A0A1W2PQD8 194 aa23.95■■□□□ 1.42
USP39-203ENST00000409470 KINO60870 393 aaKnown RBP23.95■■□□□ 1.42
USP39-203ENST00000409470 TEX11Q8IYF3 940 aa23.95■■□□□ 1.42
USP39-203ENST00000409470 SAP30BPQ9UHR5 308 aaKnown RBP23.95■■□□□ 1.42
USP39-203ENST00000409470 KCNJ14Q9UNX9 436 aa23.95■■□□□ 1.42
USP39-203ENST00000409470 TFAP4Q01664 338 aa23.94■■□□□ 1.42
USP39-203ENST00000409470 SNW1Q13573 536 aaKnown RBP23.94■■□□□ 1.42
USP39-203ENST00000409470 SASS6Q6UVJ0 657 aa23.94■■□□□ 1.42
USP39-203ENST00000409470 ZNF622Q969S3 477 aaKnown RBP eCLIP23.94■■□□□ 1.42
USP39-203ENST00000409470 NAV1Q8NEY1 1877 aa23.94■■□□□ 1.42
USP39-203ENST00000409470 TNS1Q9HBL0 1735 aaKnown RBP23.94■■□□□ 1.42
USP39-203ENST00000409470 CTAGE5O15320 804 aa23.94■■□□□ 1.42
USP39-203ENST00000409470 NT5C2P49902 561 aa23.94■■□□□ 1.42
USP39-203ENST00000409470 DIS3L2Q8IYB7 885 aaKnown RBP23.94■■□□□ 1.42
USP39-203ENST00000409470 CTCFLQ8NI51 663 aaPredicted RBP23.94■■□□□ 1.42
USP39-203ENST00000409470 ROBO3Q96MS0 1386 aa23.94■■□□□ 1.42
USP39-203ENST00000409470 PLEKHA8P1O95397 391 aa23.93■■□□□ 1.42
USP39-203ENST00000409470 SLC39A14Q15043 492 aa23.93■■□□□ 1.42
USP39-203ENST00000409470 NOSTRINQ8IVI9 506 aa23.93■■□□□ 1.42
USP39-203ENST00000409470 ENGASEQ8NFI3 743 aa23.93■■□□□ 1.42
USP39-203ENST00000409470 FAM163AQ96GL9 167 aaPredicted RBP23.93■■□□□ 1.42
USP39-203ENST00000409470 MRVI1Q9Y6F6 885 aa23.93■■□□□ 1.42
USP39-203ENST00000409470 BTBD18B2RXH4 712 aa23.93■■□□□ 1.42
USP39-203ENST00000409470 XBP1P17861 261 aa23.93■■□□□ 1.42
USP39-203ENST00000409470 A0A1B0GVL5 298 aa23.92■■□□□ 1.42
USP39-203ENST00000409470 ZNF444Q8N0Y2 327 aaPredicted RBP23.92■■□□□ 1.42
USP39-203ENST00000409470 COL11A2P13942 1736 aaPredicted RBP23.92■■□□□ 1.42
USP39-203ENST00000409470 GAKO14976 1311 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 G3V3G9 751 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 PRPF3O43395 683 aaKnown RBP23.91■■□□□ 1.42
USP39-203ENST00000409470 PLCD1P51178 756 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 DCAF8Q5TAQ9 597 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 TMTC3Q6ZXV5 915 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 C2CD5Q86YS7 1000 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 JMYQ8N9B5 988 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 FOXP1Q9H334 677 aaPredicted RBP23.91■■□□□ 1.42
USP39-203ENST00000409470 RRAGDQ9NQL2 400 aaPredicted RBP23.91■■□□□ 1.42
USP39-203ENST00000409470 USP25Q9UHP3 1055 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 V9GY48 417 aaPredicted RBP23.91■■□□□ 1.42
USP39-203ENST00000409470 MYH6P13533 1939 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 MARCKSP29966 332 aaPredicted RBP23.91■■□□□ 1.42
USP39-203ENST00000409470 FUT2Q10981 343 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 DOK7Q18PE1 504 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 FAM200AQ8TCP9 573 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 KAT14Q9H8E8 782 aa23.91■■□□□ 1.42
USP39-203ENST00000409470 ESPNB1AK53 854 aa23.9■■□□□ 1.42
USP39-203ENST00000409470 TSPY3P0CV98 308 aa23.9■■□□□ 1.42
USP39-203ENST00000409470 TSPY8P0CW00 308 aa23.9■■□□□ 1.42
USP39-203ENST00000409470 ANO6Q4KMQ2 910 aa23.9■■□□□ 1.42
USP39-203ENST00000409470 FMR1NBQ8N0W7 255 aaPredicted RBP23.9■■□□□ 1.42
USP39-203ENST00000409470 ZNF287Q9HBT7 754 aa23.9■■□□□ 1.42
USP39-203ENST00000409470 FLT1P17948 1338 aa23.9■■□□□ 1.42
USP39-203ENST00000409470 NDUFA8P51970 172 aa23.89■■□□□ 1.42
USP39-203ENST00000409470 RHBDL3P58872 404 aa23.89■■□□□ 1.42
USP39-203ENST00000409470 CCDC178Q5BJE1 867 aa23.89■■□□□ 1.42
USP39-203ENST00000409470 RCSD1Q6JBY9 416 aa23.89■■□□□ 1.42
USP39-203ENST00000409470 DGKHQ86XP1 1220 aa23.89■■□□□ 1.42
USP39-203ENST00000409470 SLC44A5Q8NCS7 719 aa23.89■■□□□ 1.42
USP39-203ENST00000409470 MAP3K14Q99558 947 aa23.89■■□□□ 1.42
USP39-203ENST00000409470 SUGT1Q9Y2Z0 365 aa23.89■■□□□ 1.42
USP39-203ENST00000409470 hCG_1642624A0A1W2PR95 340 aa23.89■■□□□ 1.41
USP39-203ENST00000409470 F8W031 263 aaPredicted RBP23.89■■□□□ 1.41
USP39-203ENST00000409470 PPP6R2O75170 966 aa23.89■■□□□ 1.41
USP39-203ENST00000409470 PKN1Q16512 942 aa23.89■■□□□ 1.41
USP39-203ENST00000409470 EYA3Q99504 573 aa23.89■■□□□ 1.41
USP39-203ENST00000409470 IL17RBQ9NRM6 502 aa23.89■■□□□ 1.41
USP39-203ENST00000409470 VPS54Q9P1Q0 977 aa23.89■■□□□ 1.41
USP39-203ENST00000409470 DAGLAQ9Y4D2 1042 aa23.89■■□□□ 1.41
USP39-203ENST00000409470 RGPD3A6NKT7 1758 aaPredicted RBP23.88■■□□□ 1.41
USP39-203ENST00000409470 RGPD4Q7Z3J3 1758 aa23.88■■□□□ 1.41
USP39-203ENST00000409470 H0YIN7 160 aa23.88■■□□□ 1.41
USP39-203ENST00000409470 PTPAQ15257 358 aa23.88■■□□□ 1.41
USP39-203ENST00000409470 AXDND1Q5T1B0 1012 aaPredicted RBP23.88■■□□□ 1.41
USP39-203ENST00000409470 CDK5RAP2Q96SN8 1893 aa23.88■■□□□ 1.41
USP39-203ENST00000409470 WDHD1O75717 1129 aaPredicted RBP23.88■■□□□ 1.41
USP39-203ENST00000409470 CMA1P23946 247 aa23.88■■□□□ 1.41
USP39-203ENST00000409470 EZH2Q15910 746 aaKnown RBP23.88■■□□□ 1.41
USP39-203ENST00000409470 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms