RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 DYNLL2Q96FJ2 89 aa23.74■■□□□ 1.39
PDLIM2-207ENST00000409417 AFG3L2Q9Y4W6 797 aa23.74■■□□□ 1.39
PDLIM2-207ENST00000409417 CCL15-CCL14A0A0B4J2E2 113 aa23.73■■□□□ 1.39
PDLIM2-207ENST00000409417 GDF11O95390 407 aa23.73■■□□□ 1.39
PDLIM2-207ENST00000409417 JAG1P78504 1218 aa23.73■■□□□ 1.39
PDLIM2-207ENST00000409417 CCL15Q16663 113 aa23.73■■□□□ 1.39
PDLIM2-207ENST00000409417 CERKLQ49MI3 558 aaPredicted RBP23.73■■□□□ 1.39
PDLIM2-207ENST00000409417 CWC27Q6UX04 472 aaKnown RBP23.73■■□□□ 1.39
PDLIM2-207ENST00000409417 BRI3BPQ8WY22 251 aa23.73■■□□□ 1.39
PDLIM2-207ENST00000409417 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.73■■□□□ 1.39
PDLIM2-207ENST00000409417 BAZ2AQ9UIF9 1905 aaKnown RBP23.73■■□□□ 1.39
PDLIM2-207ENST00000409417 USP17L5A8MUK1 530 aa23.72■■□□□ 1.39
PDLIM2-207ENST00000409417 FOXP2O15409 715 aa23.72■■□□□ 1.39
PDLIM2-207ENST00000409417 TRPA1O75762 1119 aa23.72■■□□□ 1.39
PDLIM2-207ENST00000409417 ALDH1A1P00352 501 aa23.72■■□□□ 1.39
PDLIM2-207ENST00000409417 CTCFP49711 727 aaPredicted RBP23.72■■□□□ 1.39
PDLIM2-207ENST00000409417 ZNF589Q86UQ0 364 aaPredicted RBP23.72■■□□□ 1.39
PDLIM2-207ENST00000409417 PTPN18Q99952 460 aa23.72■■□□□ 1.39
PDLIM2-207ENST00000409417 TBC1D2Q9BYX2 928 aa23.72■■□□□ 1.39
PDLIM2-207ENST00000409417 ZBTB21Q9ULJ3 1066 aa23.72■■□□□ 1.39
PDLIM2-207ENST00000409417 DOCK1Q14185 1865 aa23.72■■□□□ 1.39
PDLIM2-207ENST00000409417 SMIM22K7EJ46 135 aa23.71■■□□□ 1.39
PDLIM2-207ENST00000409417 IGF2BP3O00425 579 aaKnown RBP eCLIP23.71■■□□□ 1.39
PDLIM2-207ENST00000409417 MFAP1P55081 439 aaKnown RBP23.71■■□□□ 1.39
PDLIM2-207ENST00000409417 OTUD7BQ6GQQ9 843 aa23.71■■□□□ 1.39
PDLIM2-207ENST00000409417 C16orf86Q6ZW13 317 aa23.71■■□□□ 1.39
PDLIM2-207ENST00000409417 SKAP1Q86WV1 359 aa23.71■■□□□ 1.39
PDLIM2-207ENST00000409417 SLC44A5Q8NCS7 719 aa23.71■■□□□ 1.39
PDLIM2-207ENST00000409417 NAPBQ9H115 298 aa23.71■■□□□ 1.39
PDLIM2-207ENST00000409417 CCDC171Q6TFL3 1326 aa23.71■■□□□ 1.39
PDLIM2-207ENST00000409417 MINDY4BA8MYZ0 360 aa23.7■■□□□ 1.38
PDLIM2-207ENST00000409417 GH2P01242 217 aa23.7■■□□□ 1.38
PDLIM2-207ENST00000409417 CDK8P49336 464 aa23.7■■□□□ 1.38
PDLIM2-207ENST00000409417 ABCB5Q2M3G0 1257 aa23.7■■□□□ 1.38
PDLIM2-207ENST00000409417 SHROOM1Q2M3G4 852 aaPredicted RBP23.7■■□□□ 1.38
PDLIM2-207ENST00000409417 VPS53Q5VIR6 699 aa23.7■■□□□ 1.38
PDLIM2-207ENST00000409417 CCDC84Q86UT8 332 aaPredicted RBP23.7■■□□□ 1.38
PDLIM2-207ENST00000409417 LAMB1P07942 1786 aa23.7■■□□□ 1.38
PDLIM2-207ENST00000409417 TRIM75PA6NK02 468 aa23.69■■□□□ 1.38
PDLIM2-207ENST00000409417 ALX1Q15699 326 aa23.69■■□□□ 1.38
PDLIM2-207ENST00000409417 ZNF280CQ8ND82 737 aa23.69■■□□□ 1.38
PDLIM2-207ENST00000409417 ROBO3Q96MS0 1386 aa23.69■■□□□ 1.38
PDLIM2-207ENST00000409417 A0A0G2JLL6 359 aaPredicted RBP23.68■■□□□ 1.38
PDLIM2-207ENST00000409417 HSPD1P10809 573 aaKnown RBP23.68■■□□□ 1.38
PDLIM2-207ENST00000409417 SPP2Q13103 211 aa23.68■■□□□ 1.38
PDLIM2-207ENST00000409417 PRRT2Q7Z6L0 340 aaPredicted RBP23.68■■□□□ 1.38
PDLIM2-207ENST00000409417 WDR18Q9BV38 432 aa23.68■■□□□ 1.38
PDLIM2-207ENST00000409417 AS3MTQ9HBK9 375 aa23.68■■□□□ 1.38
PDLIM2-207ENST00000409417 CABP5Q9NP86 173 aa23.68■■□□□ 1.38
PDLIM2-207ENST00000409417 TSKSQ9UJT2 592 aa23.68■■□□□ 1.38
PDLIM2-207ENST00000409417 HSPA8P11142 646 aaKnown RBP23.68■■□□□ 1.38
PDLIM2-207ENST00000409417 CFHR5Q9BXR6 569 aa23.68■■□□□ 1.38
PDLIM2-207ENST00000409417 CHMLP26374 656 aa23.67■■□□□ 1.38
PDLIM2-207ENST00000409417 MOGSQ13724 837 aa23.67■■□□□ 1.38
PDLIM2-207ENST00000409417 BMP2KLQ5H9B9 411 aa23.67■■□□□ 1.38
PDLIM2-207ENST00000409417 FASTKD5Q7L8L6 764 aaKnown RBP23.67■■□□□ 1.38
PDLIM2-207ENST00000409417 CCDC17Q96LX7 622 aa23.67■■□□□ 1.38
PDLIM2-207ENST00000409417 ZCCHC17Q9NP64 241 aaKnown RBP23.67■■□□□ 1.38
PDLIM2-207ENST00000409417 BTBD19C9JJ37 291 aa23.66■■□□□ 1.38
PDLIM2-207ENST00000409417 LBX1P52954 281 aa23.66■■□□□ 1.38
PDLIM2-207ENST00000409417 FAM43AQ8N2R8 423 aa23.66■■□□□ 1.38
PDLIM2-207ENST00000409417 ZNF287Q9HBT7 754 aa23.66■■□□□ 1.38
PDLIM2-207ENST00000409417 ZMYM6O95789 1325 aa23.66■■□□□ 1.38
PDLIM2-207ENST00000409417 MPHOSPH10O00566 681 aaKnown RBP23.65■■□□□ 1.38
PDLIM2-207ENST00000409417 FGAP02671 866 aa23.65■■□□□ 1.38
PDLIM2-207ENST00000409417 SLC3A2P08195 630 aaKnown RBP23.65■■□□□ 1.38
PDLIM2-207ENST00000409417 PPARAQ07869 468 aa23.65■■□□□ 1.38
PDLIM2-207ENST00000409417 RAB3GAP1Q15042 981 aa23.65■■□□□ 1.38
PDLIM2-207ENST00000409417 ANKRD23Q86SG2 305 aa23.65■■□□□ 1.38
PDLIM2-207ENST00000409417 RUFY2Q8WXA3 655 aa23.65■■□□□ 1.38
PDLIM2-207ENST00000409417 PHIPQ8WWQ0 1821 aa23.64■■□□□ 1.38
PDLIM2-207ENST00000409417 ATAD5Q96QE3 1844 aa23.64■■□□□ 1.38
PDLIM2-207ENST00000409417 TBC1D8O95759 1140 aa23.64■■□□□ 1.38
PDLIM2-207ENST00000409417 GUCY1A2P33402 732 aa23.64■■□□□ 1.38
PDLIM2-207ENST00000409417 BACE1P56817 501 aa23.64■■□□□ 1.38
PDLIM2-207ENST00000409417 TMEM179Q6ZVK1 233 aa23.64■■□□□ 1.38
PDLIM2-207ENST00000409417 MKNK2Q9HBH9 465 aa23.64■■□□□ 1.38
PDLIM2-207ENST00000409417 RAD50Q92878 1312 aa23.64■■□□□ 1.37
PDLIM2-207ENST00000409417 AKR1B1P15121 316 aa23.63■■□□□ 1.37
PDLIM2-207ENST00000409417 SEPT2Q15019 361 aa23.63■■□□□ 1.37
PDLIM2-207ENST00000409417 PRDM10Q9NQV6 1147 aa23.63■■□□□ 1.37
PDLIM2-207ENST00000409417 C19orf81C9J6K1 198 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 USP17L10C9JJH3 530 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 MTMR2Q13614 643 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 SH3D19Q5HYK7 790 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 GPAT2Q6NUI2 795 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 STK11IPQ8N1F8 1099 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 IL25Q9H293 177 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 ANAPC4Q9UJX5 808 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 RASA1P20936 1047 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 HMGCS2P54868 508 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 PDE4BQ07343 736 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 CRHR2Q13324 411 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 TAF1CQ15572 869 aaPredicted RBP23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 NOM1Q5C9Z4 860 aaKnown RBP23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 GADL1Q6ZQY3 521 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 PROCA1Q8NCQ7 364 aaPredicted RBP23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 DSCC1Q9BVC3 393 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 R3HDMLQ9H3Y0 253 aa23.62■■□□□ 1.37
PDLIM2-207ENST00000409417 PDHXO00330 501 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms