RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 GINM1Q9NU53 330 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 TAF6LQ9Y6J9 622 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 RPS6KB1P23443 525 aa18■□□□□ 0.47
AP1S3-204ENST00000409375 SHMT1P34896 483 aa18■□□□□ 0.47
AP1S3-204ENST00000409375 EVX2Q03828 476 aa18■□□□□ 0.47
AP1S3-204ENST00000409375 MIGA2Q7L4E1 593 aa18■□□□□ 0.47
AP1S3-204ENST00000409375 MB21D2Q8IYB1 491 aaPredicted RBP18■□□□□ 0.47
AP1S3-204ENST00000409375 TMEM87BQ96K49 555 aa18■□□□□ 0.47
AP1S3-204ENST00000409375 DNAJC18Q9H819 358 aa18■□□□□ 0.47
AP1S3-204ENST00000409375 SMIM22K7EJ46 135 aa17.99■□□□□ 0.47
AP1S3-204ENST00000409375 MPHOSPH10O00566 681 aaKnown RBP17.99■□□□□ 0.47
AP1S3-204ENST00000409375 PRC1O43663 620 aa17.99■□□□□ 0.47
AP1S3-204ENST00000409375 IREB2P48200 963 aaKnown RBP17.99■□□□□ 0.47
AP1S3-204ENST00000409375 NEK4P51957 841 aa17.99■□□□□ 0.47
AP1S3-204ENST00000409375 TFAP4Q01664 338 aa17.99■□□□□ 0.47
AP1S3-204ENST00000409375 ANKRD1Q15327 319 aa17.99■□□□□ 0.47
AP1S3-204ENST00000409375 ABCB5Q2M3G0 1257 aa17.99■□□□□ 0.47
AP1S3-204ENST00000409375 PRAMEF18Q5VWM3 479 aa17.99■□□□□ 0.47
AP1S3-204ENST00000409375 CDAN1Q8IWY9 1227 aa17.99■□□□□ 0.47
AP1S3-204ENST00000409375 SMC1BQ8NDV3 1235 aa17.99■□□□□ 0.47
AP1S3-204ENST00000409375 FAM196BA6NMK8 535 aa17.98■□□□□ 0.47
AP1S3-204ENST00000409375 TTLL12Q14166 644 aaPredicted RBP17.98■□□□□ 0.47
AP1S3-204ENST00000409375 TMEM179Q6ZVK1 233 aa17.98■□□□□ 0.47
AP1S3-204ENST00000409375 ARMC9Q7Z3E5 817 aa17.98■□□□□ 0.47
AP1S3-204ENST00000409375 TMTC2Q8N394 836 aa17.98■□□□□ 0.47
AP1S3-204ENST00000409375 NEDD1Q8NHV4 660 aa17.98■□□□□ 0.47
AP1S3-204ENST00000409375 UPF3BQ9BZI7 483 aaKnown RBP17.98■□□□□ 0.47
AP1S3-204ENST00000409375 INCENPQ9NQS7 918 aa17.98■□□□□ 0.47
AP1S3-204ENST00000409375 PDRG1Q9NUG6 133 aa17.98■□□□□ 0.47
AP1S3-204ENST00000409375 TCP11L1Q9NUJ3 509 aa17.98■□□□□ 0.47
AP1S3-204ENST00000409375 ZSWIM5Q9P217 1185 aa17.98■□□□□ 0.47
AP1S3-204ENST00000409375 RBM19Q9Y4C8 960 aaKnown RBP17.98■□□□□ 0.47
AP1S3-204ENST00000409375 PLIN4Q96Q06 1357 aa17.98■□□□□ 0.47
AP1S3-204ENST00000409375 IFIT3O14879 490 aaKnown RBP17.97■□□□□ 0.47
AP1S3-204ENST00000409375 CTNND1O60716 968 aaKnown RBP17.97■□□□□ 0.47
AP1S3-204ENST00000409375 ASNSP08243 561 aa17.97■□□□□ 0.47
AP1S3-204ENST00000409375 CAP2P40123 477 aa17.97■□□□□ 0.47
AP1S3-204ENST00000409375 FKBP1BP68106 108 aa17.97■□□□□ 0.47
AP1S3-204ENST00000409375 WRNIP1Q96S55 665 aa17.97■□□□□ 0.47
AP1S3-204ENST00000409375 ZSCAN10Q96SZ4 725 aaPredicted RBP17.97■□□□□ 0.47
AP1S3-204ENST00000409375 TACC3Q9Y6A5 838 aa17.97■□□□□ 0.47
AP1S3-204ENST00000409375 KIF3CO14782 793 aa17.96■□□□□ 0.47
AP1S3-204ENST00000409375 TOMM70O94826 608 aa17.96■□□□□ 0.47
AP1S3-204ENST00000409375 MCM2P49736 904 aa17.96■□□□□ 0.47
AP1S3-204ENST00000409375 EXOSC10Q01780 885 aaKnown RBP17.96■□□□□ 0.47
AP1S3-204ENST00000409375 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
AP1S3-204ENST00000409375 RBM46Q8TBY0 533 aaKnown RBP17.96■□□□□ 0.47
AP1S3-204ENST00000409375 TTC14Q96N46 770 aa17.96■□□□□ 0.47
AP1S3-204ENST00000409375 ALDH8A1Q9H2A2 487 aaPredicted RBP17.96■□□□□ 0.47
AP1S3-204ENST00000409375 KANSL2Q9H9L4 492 aa17.96■□□□□ 0.47
AP1S3-204ENST00000409375 ZNF112Q9UJU3 913 aa17.96■□□□□ 0.47
AP1S3-204ENST00000409375 SSC5DA1L4H1 1573 aa17.96■□□□□ 0.46
AP1S3-204ENST00000409375 UNCXA6NJT0 531 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 GDF11O95390 407 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 AKR1B1P15121 316 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 WTAPQ15007 396 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 TMEM67Q5HYA8 995 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 CYB5R4Q7L1T6 521 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 C2orf69Q8N8R5 385 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 ZNF784Q8NCA9 323 aaPredicted RBP17.95■□□□□ 0.46
AP1S3-204ENST00000409375 KLRG1Q96E93 195 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 PICK1Q9NRD5 415 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 ZBTB21Q9ULJ3 1066 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 ANGEL1Q9UNK9 670 aaKnown RBP17.95■□□□□ 0.46
AP1S3-204ENST00000409375 CSADQ9Y600 493 aa17.95■□□□□ 0.46
AP1S3-204ENST00000409375 PHF20L1A8MW92 1017 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 USP2O75604 605 aaPredicted RBP17.94■□□□□ 0.46
AP1S3-204ENST00000409375 GH2P01242 217 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 ANTXR2P58335 489 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 MAP3K9P80192 1104 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 MAP3K11Q16584 847 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
AP1S3-204ENST00000409375 Q6ZUG5 572 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 CHST3Q7LGC8 479 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 DGKHQ86XP1 1220 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 ANKRD13AQ8IZ07 590 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 FBXL16Q8N461 479 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 TBC1D2Q9BYX2 928 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 ZNF408Q9H9D4 720 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 DOCK1Q14185 1865 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 TNKSO95271 1327 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 PAPPA2Q9BXP8 1791 aa17.94■□□□□ 0.46
AP1S3-204ENST00000409375 ATAD5Q96QE3 1844 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 TRPM7Q96QT4 1865 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 CCDC69A6NI79 296 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 TRAF5O00463 557 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 TTLL1O95922 423 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 CPA1P15085 419 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 ANP32AP39687 249 aaKnown RBP17.93■□□□□ 0.46
AP1S3-204ENST00000409375 LIFRP42702 1097 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 PRKG1Q13976 671 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 RAB3GAP1Q15042 981 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 NOL9Q5SY16 702 aaKnown RBP17.93■□□□□ 0.46
AP1S3-204ENST00000409375 SYNE3Q6ZMZ3 975 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 NFXL1Q6ZNB6 911 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 SCYL3Q8IZE3 742 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 ZKSCAN3Q9BRR0 538 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 SH2D4AQ9H788 454 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 ARHGEF10LQ9HCE6 1279 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 GBA2Q9HCG7 927 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms